RNA–Protein interactions for RNA: ENST00000421625.6

USP48-205, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 2,818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-205ENST00000421625 SLCO1A2P46721 670 aa23.05■■□□□ 1.28
USP48-205ENST00000421625 SLC12A3P55017 1021 aa23.05■■□□□ 1.28
USP48-205ENST00000421625 AADACL2Q6P093 401 aa23.05■■□□□ 1.28
USP48-205ENST00000421625 WDR66Q8TBY9 1149 aa23.05■■□□□ 1.28
USP48-205ENST00000421625 NSMCE1Q8WV22 266 aa23.05■■□□□ 1.28
USP48-205ENST00000421625 THOC1Q96FV9 657 aaKnown RBP23.05■■□□□ 1.28
USP48-205ENST00000421625 BCAS3Q9H6U6 928 aa23.05■■□□□ 1.28
USP48-205ENST00000421625 INTUQ9ULD6 942 aa23.05■■□□□ 1.28
USP48-205ENST00000421625 TRAF3IP3Q9Y228 551 aa23.05■■□□□ 1.28
USP48-205ENST00000421625 RPTORQ8N122 1335 aa23.05■■□□□ 1.28
USP48-205ENST00000421625 NEBLO76041 1014 aa23.04■■□□□ 1.28
USP48-205ENST00000421625 KNOP1Q1ED39 458 aaKnown RBP23.04■■□□□ 1.28
USP48-205ENST00000421625 SFR1Q86XK3 245 aa23.04■■□□□ 1.28
USP48-205ENST00000421625 JAMLQ86YT9 394 aa23.04■■□□□ 1.28
USP48-205ENST00000421625 EPS8L3Q8TE67 593 aaKnown RBP23.04■■□□□ 1.28
USP48-205ENST00000421625 GPR101Q96P66 508 aaPredicted RBP23.04■■□□□ 1.28
USP48-205ENST00000421625 DHX36Q9H2U1 1008 aaKnown RBP23.04■■□□□ 1.28
USP48-205ENST00000421625 SEMA4AQ9H3S1 761 aa23.04■■□□□ 1.28
USP48-205ENST00000421625 CLK2P49760 499 aaKnown RBP23.04■■□□□ 1.28
USP48-205ENST00000421625 GSTO1P78417 241 aa23.04■■□□□ 1.28
USP48-205ENST00000421625 KIAA1755Q5JYT7 1200 aa23.04■■□□□ 1.28
USP48-205ENST00000421625 CCDC169A6NNP5 214 aa23.04■■□□□ 1.28
USP48-205ENST00000421625 KIAA0391O15091 583 aaKnown RBP23.04■■□□□ 1.28
USP48-205ENST00000421625 EVI5O60447 810 aa23.04■■□□□ 1.28
USP48-205ENST00000421625 RTN2O75298 545 aa23.04■■□□□ 1.28
USP48-205ENST00000421625 HSPA1LP34931 641 aa23.04■■□□□ 1.28
USP48-205ENST00000421625 PLS1Q14651 629 aa23.04■■□□□ 1.28
USP48-205ENST00000421625 SLC10A5Q5PT55 438 aa23.04■■□□□ 1.28
USP48-205ENST00000421625 SLC35C1Q96A29 364 aa23.04■■□□□ 1.28
USP48-205ENST00000421625 EBF2Q9HAK2 575 aa23.04■■□□□ 1.28
USP48-205ENST00000421625 TRPC6Q9Y210 931 aa23.04■■□□□ 1.28
USP48-205ENST00000421625 CD2APQ9Y5K6 639 aa23.04■■□□□ 1.28
USP48-205ENST00000421625 ANXA13P27216 316 aa23.03■■□□□ 1.28
USP48-205ENST00000421625 PSMC6P62333 389 aa23.03■■□□□ 1.28
USP48-205ENST00000421625 KCNJ2P63252 427 aa23.03■■□□□ 1.28
USP48-205ENST00000421625 PPATQ06203 517 aa23.03■■□□□ 1.28
USP48-205ENST00000421625 SLC30A5Q8TAD4 765 aa23.03■■□□□ 1.28
USP48-205ENST00000421625 ARHGEF26Q96DR7 871 aa23.03■■□□□ 1.28
USP48-205ENST00000421625 NLRP3Q96P20 1036 aa23.03■■□□□ 1.28
USP48-205ENST00000421625 JMJD4Q9H9V9 463 aa23.03■■□□□ 1.28
USP48-205ENST00000421625 TMOD4Q9NZQ9 345 aa23.03■■□□□ 1.28
USP48-205ENST00000421625 ATP8B3O60423 1300 aa23.03■■□□□ 1.28
USP48-205ENST00000421625 AFF2P51816 1311 aa23.03■■□□□ 1.28
USP48-205ENST00000421625 MEIS1O00470 390 aa23.03■■□□□ 1.28
USP48-205ENST00000421625 GNPATO15228 680 aa23.03■■□□□ 1.28
USP48-205ENST00000421625 CLIC2O15247 247 aa23.03■■□□□ 1.28
USP48-205ENST00000421625 SKAP2O75563 359 aaPredicted RBP23.03■■□□□ 1.28
USP48-205ENST00000421625 CCDC38Q502W7 563 aa23.03■■□□□ 1.28
USP48-205ENST00000421625 RFFLQ8WZ73 363 aa23.03■■□□□ 1.28
USP48-205ENST00000421625 ALG3Q92685 438 aa23.03■■□□□ 1.28
USP48-205ENST00000421625 C18orf8Q96DM3 657 aa23.03■■□□□ 1.28
USP48-205ENST00000421625 ARFGEF1Q9Y6D6 1849 aa23.02■■□□□ 1.28
USP48-205ENST00000421625 CDK5RAP2Q96SN8 1893 aa23.02■■□□□ 1.28
USP48-205ENST00000421625 KRT13P13646 458 aa23.02■■□□□ 1.28
USP48-205ENST00000421625 GIT2Q14161 759 aa23.02■■□□□ 1.28
USP48-205ENST00000421625 AGAP11Q8TF27 550 aa23.02■■□□□ 1.28
USP48-205ENST00000421625 RSRC1Q96IZ7 334 aaKnown RBP23.02■■□□□ 1.28
USP48-205ENST00000421625 CCDC113Q9H0I3 377 aa23.02■■□□□ 1.28
USP48-205ENST00000421625 SLC24A3Q9HC58 644 aa23.02■■□□□ 1.28
USP48-205ENST00000421625 GRHL1Q9NZI5 618 aa23.02■■□□□ 1.28
USP48-205ENST00000421625 NCANO14594 1321 aa23.02■■□□□ 1.28
USP48-205ENST00000421625 UBOX5O94941 541 aa23.02■■□□□ 1.28
USP48-205ENST00000421625 FGFR4P22455 802 aa23.02■■□□□ 1.28
USP48-205ENST00000421625 TTBK2Q6IQ55 1244 aa23.02■■□□□ 1.28
USP48-205ENST00000421625 ADGRF4Q8IZF3 695 aa23.02■■□□□ 1.28
USP48-205ENST00000421625 GOLGA6L10A0A0M3HER8 536 aa23.01■■□□□ 1.27
USP48-205ENST00000421625 ANP32DO95626 131 aa23.01■■□□□ 1.27
USP48-205ENST00000421625 FERP16591 822 aa23.01■■□□□ 1.27
USP48-205ENST00000421625 KCNA1Q09470 495 aa23.01■■□□□ 1.27
USP48-205ENST00000421625 PABPC4Q13310 644 aaKnown RBP eCLIP23.01■■□□□ 1.27
USP48-205ENST00000421625 CRELD2Q6UXH1 353 aaPredicted RBP23.01■■□□□ 1.27
USP48-205ENST00000421625 HOOK2Q96ED9 719 aa23.01■■□□□ 1.27
USP48-205ENST00000421625 REEP2Q9BRK0 252 aa23.01■■□□□ 1.27
USP48-205ENST00000421625 IKZF4Q9H2S9 585 aa23.01■■□□□ 1.27
USP48-205ENST00000421625 CCNL1Q9UK58 526 aaPredicted RBP23.01■■□□□ 1.27
USP48-205ENST00000421625 ASTN1O14525 1302 aa23.01■■□□□ 1.27
USP48-205ENST00000421625 NR3C1P04150 777 aa23.01■■□□□ 1.27
USP48-205ENST00000421625 NOVP48745 357 aa23.01■■□□□ 1.27
USP48-205ENST00000421625 MAPK7Q13164 816 aa23.01■■□□□ 1.27
USP48-205ENST00000421625 PPP2R5AQ15172 486 aa23.01■■□□□ 1.27
USP48-205ENST00000421625 CARD9Q9H257 536 aa23.01■■□□□ 1.27
USP48-205ENST00000421625 TAS2R14Q9NYV8 317 aa23.01■■□□□ 1.27
USP48-205ENST00000421625 RTCBQ9Y3I0 505 aaKnown RBP23.01■■□□□ 1.27
USP48-205ENST00000421625 PCDHB13Q9Y5F0 798 aa23.01■■□□□ 1.27
USP48-205ENST00000421625 PITPNM2Q9BZ72 1349 aa23■■□□□ 1.27
USP48-205ENST00000421625 FAM187AA6NFU0 413 aa23■■□□□ 1.27
USP48-205ENST00000421625 SLC16A2P36021 539 aa23■■□□□ 1.27
USP48-205ENST00000421625 RPL21P46778 160 aaKnown RBP23■■□□□ 1.27
USP48-205ENST00000421625 RIPK1Q13546 671 aa23■■□□□ 1.27
USP48-205ENST00000421625 ASPRV1Q53RT3 343 aa23■■□□□ 1.27
USP48-205ENST00000421625 EPM2AIP1Q7L775 607 aaPredicted RBP23■■□□□ 1.27
USP48-205ENST00000421625 KCNMB3Q9NPA1 279 aa23■■□□□ 1.27
USP48-205ENST00000421625 ANKIB1Q9P2G1 1089 aa23■■□□□ 1.27
USP48-205ENST00000421625 DBR1Q9UK59 544 aaKnown RBP23■■□□□ 1.27
USP48-205ENST00000421625 C15orf41Q9Y2V0 281 aa23■■□□□ 1.27
USP48-205ENST00000421625 PNMA6FA0A0J9YX94 578 aa23■■□□□ 1.27
USP48-205ENST00000421625 RSPH10B2B2RC85 870 aa23■■□□□ 1.27
USP48-205ENST00000421625 CLGNO14967 610 aa23■■□□□ 1.27
USP48-205ENST00000421625 AGTP01019 485 aa23■■□□□ 1.27
USP48-205ENST00000421625 TMEM253P0C7T8 217 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms