RNA–Protein interactions for RNA: ENST00000419533.1

UBR4-206, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 5,583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-206ENST00000419533 GSG1L2A8MUP6 293 aa9.09□□□□□ -0.95
UBR4-206ENST00000419533 NMT2O60551 498 aa9.09□□□□□ -0.95
UBR4-206ENST00000419533 USP11P51784 963 aa9.09□□□□□ -0.95
UBR4-206ENST00000419533 MTMR2Q13614 643 aa9.09□□□□□ -0.95
UBR4-206ENST00000419533 TSTA3Q13630 321 aaPredicted RBP9.09□□□□□ -0.95
UBR4-206ENST00000419533 DPCR1Q3MIW9 517 aa9.09□□□□□ -0.95
UBR4-206ENST00000419533 MAP1SQ66K74 1059 aaPredicted RBP9.09□□□□□ -0.95
UBR4-206ENST00000419533 DARS2Q6PI48 645 aaKnown RBP9.09□□□□□ -0.95
UBR4-206ENST00000419533 CCDC170Q8IYT3 715 aa9.09□□□□□ -0.95
UBR4-206ENST00000419533 TAB3Q8N5C8 712 aaPredicted RBP9.09□□□□□ -0.95
UBR4-206ENST00000419533 XXYLT1Q8NBI6 393 aa9.09□□□□□ -0.95
UBR4-206ENST00000419533 PARD3BQ8TEW8 1205 aa9.09□□□□□ -0.95
UBR4-206ENST00000419533 NDST4Q9H3R1 872 aa9.09□□□□□ -0.95
UBR4-206ENST00000419533 FAM114A2Q9NRY5 505 aa9.09□□□□□ -0.95
UBR4-206ENST00000419533 CCL15-CCL14A0A0B4J2E2 113 aa9.09□□□□□ -0.95
UBR4-206ENST00000419533 CPP00450 1065 aa9.09□□□□□ -0.95
UBR4-206ENST00000419533 INHBAP08476 426 aa9.09□□□□□ -0.95
UBR4-206ENST00000419533 FKBP1BP68106 108 aa9.09□□□□□ -0.95
UBR4-206ENST00000419533 CDC42EP1Q00587 391 aa9.09□□□□□ -0.95
UBR4-206ENST00000419533 PDE1BQ01064 536 aa9.09□□□□□ -0.95
UBR4-206ENST00000419533 CCL15Q16663 113 aa9.09□□□□□ -0.95
UBR4-206ENST00000419533 SGO2Q562F6 1265 aa9.09□□□□□ -0.95
UBR4-206ENST00000419533 RHPN2Q8IUC4 686 aa9.09□□□□□ -0.95
UBR4-206ENST00000419533 ANKRD13CQ8N6S4 541 aa9.09□□□□□ -0.95
UBR4-206ENST00000419533 DNAAF3Q8N9W5 541 aa9.09□□□□□ -0.95
UBR4-206ENST00000419533 GPRC5DQ9NZD1 345 aa9.09□□□□□ -0.95
UBR4-206ENST00000419533 SEL1LQ9UBV2 794 aa9.09□□□□□ -0.95
UBR4-206ENST00000419533 AKR1B1P15121 316 aa9.09□□□□□ -0.95
UBR4-206ENST00000419533 PPARGP37231 505 aaPredicted RBP9.09□□□□□ -0.95
UBR4-206ENST00000419533 THOC5Q13769 683 aaKnown RBP9.09□□□□□ -0.95
UBR4-206ENST00000419533 DEFB115Q30KQ5 88 aa9.09□□□□□ -0.95
UBR4-206ENST00000419533 C12orf60Q5U649 245 aa9.09□□□□□ -0.95
UBR4-206ENST00000419533 RNF219Q5W0B1 726 aaPredicted RBP9.09□□□□□ -0.95
UBR4-206ENST00000419533 RESP18Q5W5W9 173 aa9.09□□□□□ -0.95
UBR4-206ENST00000419533 ARHGEF2Q92974 986 aaKnown RBP9.09□□□□□ -0.95
UBR4-206ENST00000419533 NSUN4Q96CB9 384 aaKnown RBP9.09□□□□□ -0.95
UBR4-206ENST00000419533 CALN1Q9BXU9 219 aa9.09□□□□□ -0.95
UBR4-206ENST00000419533 MRPL4Q9BYD3 311 aaKnown RBP9.09□□□□□ -0.95
UBR4-206ENST00000419533 UBN1Q9NPG3 1134 aa9.09□□□□□ -0.95
UBR4-206ENST00000419533 IL1R1P14778 569 aa9.08□□□□□ -0.96
UBR4-206ENST00000419533 KPNA2P52292 529 aaKnown RBP9.08□□□□□ -0.96
UBR4-206ENST00000419533 ETF1P62495 437 aaKnown RBP9.08□□□□□ -0.96
UBR4-206ENST00000419533 ASPHQ12797 758 aa9.08□□□□□ -0.96
UBR4-206ENST00000419533 ZNF699Q32M78 642 aa9.08□□□□□ -0.96
UBR4-206ENST00000419533 NXNQ6DKJ4 435 aa9.08□□□□□ -0.96
UBR4-206ENST00000419533 CAPN12Q6ZSI9 719 aa9.08□□□□□ -0.96
UBR4-206ENST00000419533 ATG9AQ7Z3C6 839 aa9.08□□□□□ -0.96
UBR4-206ENST00000419533 CEP57Q86XR8 500 aa9.08□□□□□ -0.96
UBR4-206ENST00000419533 MGARPQ8TDB4 240 aa9.08□□□□□ -0.96
UBR4-206ENST00000419533 GANCQ8TET4 914 aa9.08□□□□□ -0.96
UBR4-206ENST00000419533 VCX3BQ9H321 246 aa9.08□□□□□ -0.96
UBR4-206ENST00000419533 PVALEFA0A1B0GWK0 134 aa9.08□□□□□ -0.96
UBR4-206ENST00000419533 SFI1A8K8P3 1242 aa9.08□□□□□ -0.96
UBR4-206ENST00000419533 KBTBD13C9JR72 458 aa9.08□□□□□ -0.96
UBR4-206ENST00000419533 GOLGA8KD6RF30 607 aa9.08□□□□□ -0.96
UBR4-206ENST00000419533 IPO5O00410 1097 aaKnown RBP9.08□□□□□ -0.96
UBR4-206ENST00000419533 CTNND1O60716 968 aaKnown RBP9.08□□□□□ -0.96
UBR4-206ENST00000419533 RASSF2P50749 326 aa9.08□□□□□ -0.96
UBR4-206ENST00000419533 CRY2Q49AN0 593 aa9.08□□□□□ -0.96
UBR4-206ENST00000419533 ZNF280CQ8ND82 737 aa9.08□□□□□ -0.96
UBR4-206ENST00000419533 HDAC11Q96DB2 347 aa9.08□□□□□ -0.96
UBR4-206ENST00000419533 CABS1Q96KC9 395 aa9.08□□□□□ -0.96
UBR4-206ENST00000419533 SLC9A2Q9UBY0 812 aa9.08□□□□□ -0.96
UBR4-206ENST00000419533 POTEMA6NI47 508 aa9.08□□□□□ -0.96
UBR4-206ENST00000419533 ECEL1O95672 775 aa9.08□□□□□ -0.96
UBR4-206ENST00000419533 RAPH1Q70E73 1250 aa9.08□□□□□ -0.96
UBR4-206ENST00000419533 SFR1Q86XK3 245 aa9.08□□□□□ -0.96
UBR4-206ENST00000419533 RPUSD2Q8IZ73 545 aaKnown RBP9.08□□□□□ -0.96
UBR4-206ENST00000419533 MB21D1Q8N884 522 aa9.08□□□□□ -0.96
UBR4-206ENST00000419533 OR6J1Q8NGC5 347 aa9.08□□□□□ -0.96
UBR4-206ENST00000419533 KATNAL1Q9BW62 490 aa9.08□□□□□ -0.96
UBR4-206ENST00000419533 SPZ1Q9BXG8 430 aa9.08□□□□□ -0.96
UBR4-206ENST00000419533 POLR3FQ9H1D9 316 aaPredicted RBP9.08□□□□□ -0.96
UBR4-206ENST00000419533 TMEM88BA6NKF7 163 aa9.08□□□□□ -0.96
UBR4-206ENST00000419533 APBA1Q02410 837 aa9.08□□□□□ -0.96
UBR4-206ENST00000419533 NAA35Q5VZE5 725 aa9.08□□□□□ -0.96
UBR4-206ENST00000419533 POTEDQ86YR6 584 aa9.08□□□□□ -0.96
UBR4-206ENST00000419533 PBKQ96KB5 322 aa9.08□□□□□ -0.96
UBR4-206ENST00000419533 TEX13BQ9BXU2 312 aa9.08□□□□□ -0.96
UBR4-206ENST00000419533 NUF2Q9BZD4 464 aa9.08□□□□□ -0.96
UBR4-206ENST00000419533 FAM8A1Q9UBU6 413 aa9.08□□□□□ -0.96
UBR4-206ENST00000419533 PTPN22Q9Y2R2 807 aa9.08□□□□□ -0.96
UBR4-206ENST00000419533 SPDYE2BA6NHP3 402 aa9.07□□□□□ -0.96
UBR4-206ENST00000419533 LARGE1O95461 756 aa9.07□□□□□ -0.96
UBR4-206ENST00000419533 SPDYE6P0CI01 402 aa9.07□□□□□ -0.96
UBR4-206ENST00000419533 OAS2P29728 719 aaKnown RBP9.07□□□□□ -0.96
UBR4-206ENST00000419533 RECQLP46063 649 aaPredicted RBP9.07□□□□□ -0.96
UBR4-206ENST00000419533 RNF14Q9UBS8 474 aa9.07□□□□□ -0.96
UBR4-206ENST00000419533 PCDHA10Q9Y5I2 948 aa9.07□□□□□ -0.96
UBR4-206ENST00000419533 GOLGA8QA0A0J9YX86 632 aa9.07□□□□□ -0.96
UBR4-206ENST00000419533 GOLGA8OA6NCC3 632 aa9.07□□□□□ -0.96
UBR4-206ENST00000419533 EFCAB8A8MWE9 144 aa9.07□□□□□ -0.96
UBR4-206ENST00000419533 GOLGA8NF8WBI6 632 aa9.07□□□□□ -0.96
UBR4-206ENST00000419533 PGRMC1O00264 195 aaKnown RBP9.07□□□□□ -0.96
UBR4-206ENST00000419533 SLC16A4O15374 487 aa9.07□□□□□ -0.96
UBR4-206ENST00000419533 KRT3P12035 628 aa9.07□□□□□ -0.96
UBR4-206ENST00000419533 TCP11X2Q5H9J9 407 aa9.07□□□□□ -0.96
UBR4-206ENST00000419533 CDC42EP5Q6NZY7 148 aa9.07□□□□□ -0.96
UBR4-206ENST00000419533 ERO1BQ86YB8 467 aa9.07□□□□□ -0.96
UBR4-206ENST00000419533 CPVLQ9H3G5 476 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms