RNA–Protein interactions for RNA: ENST00000419493.2

CTSA-205, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-205ENST00000419493 PRDM6Q9NQX0 595 aa10.81□□□□□ -0.68
CTSA-205ENST00000419493 RGS18Q9NS28 235 aa10.81□□□□□ -0.68
CTSA-205ENST00000419493 C1orf112Q9NSG2 853 aa10.81□□□□□ -0.68
CTSA-205ENST00000419493 WRAP73Q9P2S5 460 aaPredicted RBP10.81□□□□□ -0.68
CTSA-205ENST00000419493 SMC3Q9UQE7 1217 aa10.81□□□□□ -0.68
CTSA-205ENST00000419493 ADGRA3Q8IWK6 1321 aa10.81□□□□□ -0.68
CTSA-205ENST00000419493 A0A087WZ62 844 aa10.8□□□□□ -0.68
CTSA-205ENST00000419493 POTEMA6NI47 508 aa10.8□□□□□ -0.68
CTSA-205ENST00000419493 MGEA5O60502 916 aa10.8□□□□□ -0.68
CTSA-205ENST00000419493 CD2BP2O95400 341 aaKnown RBP10.8□□□□□ -0.68
CTSA-205ENST00000419493 SRGAP2CP0DJJ0 459 aa10.8□□□□□ -0.68
CTSA-205ENST00000419493 DARSP14868 501 aaKnown RBP10.8□□□□□ -0.68
CTSA-205ENST00000419493 POU3F3P20264 500 aaPredicted RBP10.8□□□□□ -0.68
CTSA-205ENST00000419493 GJB2P29033 226 aa10.8□□□□□ -0.68
CTSA-205ENST00000419493 CTNNB1P35222 781 aa10.8□□□□□ -0.68
CTSA-205ENST00000419493 SPIRE1Q08AE8 756 aa10.8□□□□□ -0.68
CTSA-205ENST00000419493 PTPROQ16827 1216 aa10.8□□□□□ -0.68
CTSA-205ENST00000419493 FAM43BQ6ZT52 329 aaPredicted RBP10.8□□□□□ -0.68
CTSA-205ENST00000419493 KSR1Q8IVT5 923 aa10.8□□□□□ -0.68
CTSA-205ENST00000419493 LINC01465Q8N7H1 131 aa10.8□□□□□ -0.68
CTSA-205ENST00000419493 ZNF579Q8NAF0 562 aaKnown RBP10.8□□□□□ -0.68
CTSA-205ENST00000419493 RNF169Q8NCN4 708 aa10.8□□□□□ -0.68
CTSA-205ENST00000419493 NEK9Q8TD19 979 aa10.8□□□□□ -0.68
CTSA-205ENST00000419493 TCP11Q8WWU5 503 aa10.8□□□□□ -0.68
CTSA-205ENST00000419493 ZNF689Q96CS4 500 aaPredicted RBP10.8□□□□□ -0.68
CTSA-205ENST00000419493 MTMR9Q96QG7 549 aa10.8□□□□□ -0.68
CTSA-205ENST00000419493 FDXACB1Q9BRP7 624 aaPredicted RBP10.8□□□□□ -0.68
CTSA-205ENST00000419493 TMEM60Q9H2L4 133 aa10.8□□□□□ -0.68
CTSA-205ENST00000419493 ATP6V0A4Q9HBG4 840 aa10.8□□□□□ -0.68
CTSA-205ENST00000419493 LMCD1Q9NZU5 365 aa10.8□□□□□ -0.68
CTSA-205ENST00000419493 THEGQ9P2T0 379 aa10.8□□□□□ -0.68
CTSA-205ENST00000419493 RWDD3Q9Y3V2 267 aa10.8□□□□□ -0.68
CTSA-205ENST00000419493 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.8□□□□□ -0.68
CTSA-205ENST00000419493 A0A087WWV3 80 aa10.79□□□□□ -0.68
CTSA-205ENST00000419493 IGKV6-21A0A0C4DH24 114 aa10.79□□□□□ -0.68
CTSA-205ENST00000419493 TBKBP1A7MCY6 615 aa10.79□□□□□ -0.68
CTSA-205ENST00000419493 H3BNC9 293 aa10.79□□□□□ -0.68
CTSA-205ENST00000419493 LPXNO60711 386 aa10.79□□□□□ -0.68
CTSA-205ENST00000419493 CSPG5O95196 566 aa10.79□□□□□ -0.68
CTSA-205ENST00000419493 OR52Z1P0C646 297 aa10.79□□□□□ -0.68
CTSA-205ENST00000419493 SFPQP23246 707 aaKnown RBP eCLIP10.79□□□□□ -0.68
CTSA-205ENST00000419493 BMPR1AP36894 532 aa10.79□□□□□ -0.68
CTSA-205ENST00000419493 RFC5P40937 340 aa10.79□□□□□ -0.68
CTSA-205ENST00000419493 TRAPPC10P48553 1259 aa10.79□□□□□ -0.68
CTSA-205ENST00000419493 GATMP50440 423 aa10.79□□□□□ -0.68
CTSA-205ENST00000419493 NBR1Q14596 966 aa10.79□□□□□ -0.68
CTSA-205ENST00000419493 FAM102BQ5T8I3 360 aa10.79□□□□□ -0.68
CTSA-205ENST00000419493 ZNF410Q86VK4 478 aa10.79□□□□□ -0.68
CTSA-205ENST00000419493 CMTR2Q8IYT2 770 aaKnown RBP10.79□□□□□ -0.68
CTSA-205ENST00000419493 ABI1Q8IZP0 508 aa10.79□□□□□ -0.68
CTSA-205ENST00000419493 ERMNQ8TAM6 284 aa10.79□□□□□ -0.68
CTSA-205ENST00000419493 PIGOQ8TEQ8 1089 aa10.79□□□□□ -0.68
CTSA-205ENST00000419493 PSPC1Q8WXF1 523 aaKnown RBP10.79□□□□□ -0.68
CTSA-205ENST00000419493 TMEM143Q96AN5 459 aa10.79□□□□□ -0.68
CTSA-205ENST00000419493 CEP89Q96ST8 783 aa10.79□□□□□ -0.68
CTSA-205ENST00000419493 MTRQ99707 1265 aa10.79□□□□□ -0.68
CTSA-205ENST00000419493 HSD17B14Q9BPX1 270 aa10.79□□□□□ -0.68
CTSA-205ENST00000419493 C11orf84Q9BUA3 381 aaPredicted RBP10.79□□□□□ -0.68
CTSA-205ENST00000419493 PPME1Q9Y570 386 aa10.79□□□□□ -0.68
CTSA-205ENST00000419493 COL4A3BPQ9Y5P4 624 aa10.79□□□□□ -0.68
CTSA-205ENST00000419493 GTF3C3Q9Y5Q9 886 aa10.79□□□□□ -0.68
CTSA-205ENST00000419493 TTC3P53804 2025 aa10.79□□□□□ -0.68
CTSA-205ENST00000419493 C9IYK1 514 aa10.78□□□□□ -0.68
CTSA-205ENST00000419493 GAS2O43903 313 aaKnown RBP10.78□□□□□ -0.68
CTSA-205ENST00000419493 U2AF2P26368 475 aaKnown RBP eCLIP10.78□□□□□ -0.68
CTSA-205ENST00000419493 ORC2Q13416 577 aaPredicted RBP10.78□□□□□ -0.68
CTSA-205ENST00000419493 EMC2Q15006 297 aa10.78□□□□□ -0.68
CTSA-205ENST00000419493 LARP1BQ659C4 914 aaKnown RBP10.78□□□□□ -0.68
CTSA-205ENST00000419493 TWF2Q6IBS0 349 aaKnown RBP10.78□□□□□ -0.68
CTSA-205ENST00000419493 EP400NLQ6ZTU2 488 aa10.78□□□□□ -0.68
CTSA-205ENST00000419493 CATSPER4Q7RTX7 472 aa10.78□□□□□ -0.68
CTSA-205ENST00000419493 ATXN2LQ8WWM7 1075 aaKnown RBP10.78□□□□□ -0.68
CTSA-205ENST00000419493 PRPF31Q8WWY3 499 aaKnown RBP10.78□□□□□ -0.68
CTSA-205ENST00000419493 BACH2Q9BYV9 841 aa10.78□□□□□ -0.68
CTSA-205ENST00000419493 DHX33Q9H6R0 707 aaKnown RBP10.78□□□□□ -0.68
CTSA-205ENST00000419493 ANKEF1Q9NU02 776 aa10.78□□□□□ -0.68
CTSA-205ENST00000419493 TMEM161AQ9NX61 479 aa10.78□□□□□ -0.68
CTSA-205ENST00000419493 DACT1Q9NYF0 836 aa10.78□□□□□ -0.68
CTSA-205ENST00000419493 MRPL42Q9Y6G3 142 aaKnown RBP10.78□□□□□ -0.68
CTSA-205ENST00000419493 ASAP2O43150 1006 aa10.77□□□□□ -0.69
CTSA-205ENST00000419493 DGAT1O75907 488 aa10.77□□□□□ -0.69
CTSA-205ENST00000419493 RB1P06400 928 aa10.77□□□□□ -0.69
CTSA-205ENST00000419493 FGFR1P11362 822 aa10.77□□□□□ -0.69
CTSA-205ENST00000419493 MRPS5P82675 430 aaKnown RBP10.77□□□□□ -0.69
CTSA-205ENST00000419493 LAMTOR4Q0VGL1 99 aa10.77□□□□□ -0.69
CTSA-205ENST00000419493 PTGDRQ13258 359 aa10.77□□□□□ -0.69
CTSA-205ENST00000419493 DSC3Q14574 896 aa10.77□□□□□ -0.69
CTSA-205ENST00000419493 AAK1Q2M2I8 961 aa10.77□□□□□ -0.69
CTSA-205ENST00000419493 MAEAQ7L5Y9 396 aa10.77□□□□□ -0.69
CTSA-205ENST00000419493 CATSPER3Q86XQ3 398 aa10.77□□□□□ -0.69
CTSA-205ENST00000419493 CRIPAKQ8N1N5 446 aa10.77□□□□□ -0.69
CTSA-205ENST00000419493 RNF149Q8NC42 400 aa10.77□□□□□ -0.69
CTSA-205ENST00000419493 SYMPKQ92797 1274 aaKnown RBP10.77□□□□□ -0.69
CTSA-205ENST00000419493 CLP1Q92989 425 aaKnown RBP10.77□□□□□ -0.69
CTSA-205ENST00000419493 HLA-CQ95604 372 aa10.77□□□□□ -0.69
CTSA-205ENST00000419493 MRPL38Q96DV4 380 aaKnown RBP10.77□□□□□ -0.69
CTSA-205ENST00000419493 NACC1Q96RE7 527 aa10.77□□□□□ -0.69
CTSA-205ENST00000419493 RAB34Q9BZG1 259 aa10.77□□□□□ -0.69
CTSA-205ENST00000419493 ELAC1Q9H777 363 aaKnown RBP10.77□□□□□ -0.69
CTSA-205ENST00000419493 RC3H2Q9HBD1 1191 aaKnown RBP10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms