RNA–Protein interactions for RNA: ENST00000419181.5

GTF3A-202, Transcript of general transcription factor IIIA, humanhuman

TSL 1 (best)

Gene GTF3A, Length 1,191 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-202ENST00000419181 MTUS1Q9ULD2 1270 aa22.72■■□□□ 1.23
GTF3A-202ENST00000419181 SMC3Q9UQE7 1217 aa22.72■■□□□ 1.23
GTF3A-202ENST00000419181 RALGAPA2Q2PPJ7 1873 aa22.72■■□□□ 1.23
GTF3A-202ENST00000419181 LPXNO60711 386 aa22.71■■□□□ 1.23
GTF3A-202ENST00000419181 DGKIO75912 1065 aa22.71■■□□□ 1.23
GTF3A-202ENST00000419181 RFC5P40937 340 aa22.71■■□□□ 1.23
GTF3A-202ENST00000419181 POLGP54098 1239 aaPredicted RBP22.71■■□□□ 1.23
GTF3A-202ENST00000419181 GRB10Q13322 594 aa22.71■■□□□ 1.23
GTF3A-202ENST00000419181 EXOC8Q8IYI6 725 aa22.71■■□□□ 1.23
GTF3A-202ENST00000419181 C4orf32Q8N8J7 132 aa22.71■■□□□ 1.23
GTF3A-202ENST00000419181 NLRP7Q8WX94 980 aa22.71■■□□□ 1.23
GTF3A-202ENST00000419181 ZNF689Q96CS4 500 aaPredicted RBP22.71■■□□□ 1.23
GTF3A-202ENST00000419181 SCLT1Q96NL6 688 aa22.71■■□□□ 1.23
GTF3A-202ENST00000419181 ADAM2Q99965 735 aa22.71■■□□□ 1.23
GTF3A-202ENST00000419181 C17orf80Q9BSJ5 609 aa22.71■■□□□ 1.23
GTF3A-202ENST00000419181 RGS18Q9NS28 235 aa22.71■■□□□ 1.23
GTF3A-202ENST00000419181 SUCLA2Q9P2R7 463 aaPredicted RBP22.71■■□□□ 1.23
GTF3A-202ENST00000419181 ADGRA3Q8IWK6 1321 aa22.71■■□□□ 1.23
GTF3A-202ENST00000419181 DENND3A2RUS2 1198 aa22.7■■□□□ 1.22
GTF3A-202ENST00000419181 TECP42680 631 aa22.7■■□□□ 1.22
GTF3A-202ENST00000419181 SARSP49591 514 aaKnown RBP22.7■■□□□ 1.22
GTF3A-202ENST00000419181 CUL4AQ13619 759 aa22.7■■□□□ 1.22
GTF3A-202ENST00000419181 DSC3Q14574 896 aa22.7■■□□□ 1.22
GTF3A-202ENST00000419181 XKR9Q5GH70 373 aa22.7■■□□□ 1.22
GTF3A-202ENST00000419181 ZNF410Q86VK4 478 aa22.7■■□□□ 1.22
GTF3A-202ENST00000419181 C1orf112Q9NSG2 853 aa22.7■■□□□ 1.22
GTF3A-202ENST00000419181 MTCH2Q9Y6C9 303 aa22.7■■□□□ 1.22
GTF3A-202ENST00000419181 A0A0C4DFX4 3053 aa22.7■■□□□ 1.22
GTF3A-202ENST00000419181 C9IYK1 514 aa22.69■■□□□ 1.22
GTF3A-202ENST00000419181 STAG3L1P0CL83 205 aa22.69■■□□□ 1.22
GTF3A-202ENST00000419181 SPATA31C1P0DKV0 1188 aa22.69■■□□□ 1.22
GTF3A-202ENST00000419181 EMC2Q15006 297 aa22.69■■□□□ 1.22
GTF3A-202ENST00000419181 CCDC85BQ15834 202 aaPredicted RBP22.69■■□□□ 1.22
GTF3A-202ENST00000419181 MCTP1Q6DN14 999 aa22.69■■□□□ 1.22
GTF3A-202ENST00000419181 SLC24A5Q71RS6 500 aa22.69■■□□□ 1.22
GTF3A-202ENST00000419181 RHPN2Q8IUC4 686 aa22.69■■□□□ 1.22
GTF3A-202ENST00000419181 GDPD5Q8WTR4 605 aa22.69■■□□□ 1.22
GTF3A-202ENST00000419181 SAMD11Q96NU1 681 aa22.69■■□□□ 1.22
GTF3A-202ENST00000419181 GCOM2Q9BZD3 368 aaPredicted RBP22.69■■□□□ 1.22
GTF3A-202ENST00000419181 ANKEF1Q9NU02 776 aa22.69■■□□□ 1.22
GTF3A-202ENST00000419181 PCDHB6Q9Y5E3 794 aa22.69■■□□□ 1.22
GTF3A-202ENST00000419181 REV3LO60673 3130 aa22.68■■□□□ 1.22
GTF3A-202ENST00000419181 A0A087WZ62 844 aa22.68■■□□□ 1.22
GTF3A-202ENST00000419181 H3BQV1 296 aa22.68■■□□□ 1.22
GTF3A-202ENST00000419181 GAS2O43903 313 aaKnown RBP22.68■■□□□ 1.22
GTF3A-202ENST00000419181 LINC00271P0C7V0 271 aa22.68■■□□□ 1.22
GTF3A-202ENST00000419181 EPC2Q52LR7 807 aa22.68■■□□□ 1.22
GTF3A-202ENST00000419181 CATSPER3Q86XQ3 398 aa22.68■■□□□ 1.22
GTF3A-202ENST00000419181 MICALL1Q8N3F8 863 aa22.68■■□□□ 1.22
GTF3A-202ENST00000419181 FIBCD1Q8N539 461 aa22.68■■□□□ 1.22
GTF3A-202ENST00000419181 FBXO22Q8NEZ5 403 aa22.68■■□□□ 1.22
GTF3A-202ENST00000419181 FDXACB1Q9BRP7 624 aaPredicted RBP22.68■■□□□ 1.22
GTF3A-202ENST00000419181 TUFT1Q9NNX1 390 aa22.68■■□□□ 1.22
GTF3A-202ENST00000419181 BMP2KQ9NSY1 1161 aaPredicted RBP22.68■■□□□ 1.22
GTF3A-202ENST00000419181 GTPBP6O43824 516 aaPredicted RBP22.67■■□□□ 1.22
GTF3A-202ENST00000419181 FXR2P51116 673 aaKnown RBP eCLIP22.67■■□□□ 1.22
GTF3A-202ENST00000419181 PTGDRQ13258 359 aa22.67■■□□□ 1.22
GTF3A-202ENST00000419181 RILPL1Q5EBL4 403 aa22.67■■□□□ 1.22
GTF3A-202ENST00000419181 KSR1Q8IVT5 923 aa22.67■■□□□ 1.22
GTF3A-202ENST00000419181 PSPC1Q8WXF1 523 aaKnown RBP22.67■■□□□ 1.22
GTF3A-202ENST00000419181 TMEM143Q96AN5 459 aa22.67■■□□□ 1.22
GTF3A-202ENST00000419181 NLRP4Q96MN2 994 aa22.67■■□□□ 1.22
GTF3A-202ENST00000419181 POLR3CQ9BUI4 534 aaPredicted RBP22.67■■□□□ 1.22
GTF3A-202ENST00000419181 XPNPEP1Q9NQW7 623 aa22.67■■□□□ 1.22
GTF3A-202ENST00000419181 COL4A3BPQ9Y5P4 624 aa22.67■■□□□ 1.22
GTF3A-202ENST00000419181 FNDC1Q4ZHG4 1894 aaPredicted RBP22.66■■□□□ 1.22
GTF3A-202ENST00000419181 MED24O75448 989 aa22.66■■□□□ 1.22
GTF3A-202ENST00000419181 CSDE1O75534 798 aaKnown RBP22.66■■□□□ 1.22
GTF3A-202ENST00000419181 XRCC6P12956 609 aaKnown RBP eCLIP22.66■■□□□ 1.22
GTF3A-202ENST00000419181 FGFR4P22455 802 aa22.66■■□□□ 1.22
GTF3A-202ENST00000419181 RARRES1P49788 294 aa22.66■■□□□ 1.22
GTF3A-202ENST00000419181 FAM189BP81408 668 aa22.66■■□□□ 1.22
GTF3A-202ENST00000419181 BTG3Q14201 252 aaPredicted RBP22.66■■□□□ 1.22
GTF3A-202ENST00000419181 LARP1BQ659C4 914 aaKnown RBP22.66■■□□□ 1.22
GTF3A-202ENST00000419181 TMEM192Q8IY95 271 aa22.66■■□□□ 1.22
GTF3A-202ENST00000419181 CMTR2Q8IYT2 770 aaKnown RBP22.66■■□□□ 1.22
GTF3A-202ENST00000419181 ERMNQ8TAM6 284 aa22.66■■□□□ 1.22
GTF3A-202ENST00000419181 PIGOQ8TEQ8 1089 aa22.66■■□□□ 1.22
GTF3A-202ENST00000419181 PRPF31Q8WWY3 499 aaKnown RBP22.66■■□□□ 1.22
GTF3A-202ENST00000419181 CLP1Q92989 425 aaKnown RBP22.66■■□□□ 1.22
GTF3A-202ENST00000419181 MTRQ99707 1265 aa22.66■■□□□ 1.22
GTF3A-202ENST00000419181 IFT122Q9HBG6 1241 aa22.66■■□□□ 1.22
GTF3A-202ENST00000419181 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.66■■□□□ 1.22
GTF3A-202ENST00000419181 RNF216Q9NWF9 866 aaPredicted RBP22.66■■□□□ 1.22
GTF3A-202ENST00000419181 LRFN2Q9ULH4 789 aa22.66■■□□□ 1.22
GTF3A-202ENST00000419181 KIAA1671Q9BY89 1806 aa22.66■■□□□ 1.22
GTF3A-202ENST00000419181 LAD1O00515 517 aa22.65■■□□□ 1.22
GTF3A-202ENST00000419181 DGAT1O75907 488 aa22.65■■□□□ 1.22
GTF3A-202ENST00000419181 SFPQP23246 707 aaKnown RBP eCLIP22.65■■□□□ 1.22
GTF3A-202ENST00000419181 RPA1P27694 616 aa22.65■■□□□ 1.22
GTF3A-202ENST00000419181 TCP11Q8WWU5 503 aa22.65■■□□□ 1.22
GTF3A-202ENST00000419181 INO80BQ9C086 356 aaPredicted RBP22.65■■□□□ 1.22
GTF3A-202ENST00000419181 ELAC1Q9H777 363 aaKnown RBP22.65■■□□□ 1.22
GTF3A-202ENST00000419181 LMCD1Q9NZU5 365 aa22.65■■□□□ 1.22
GTF3A-202ENST00000419181 PCDHB7Q9Y5E2 793 aa22.65■■□□□ 1.22
GTF3A-202ENST00000419181 C5orf67F2Z3F1 127 aa22.64■■□□□ 1.21
GTF3A-202ENST00000419181 ZSCAN20P17040 1043 aaPredicted RBP22.64■■□□□ 1.21
GTF3A-202ENST00000419181 IBSPP21815 317 aaPredicted RBP22.64■■□□□ 1.21
GTF3A-202ENST00000419181 GATMP50440 423 aa22.64■■□□□ 1.21
GTF3A-202ENST00000419181 LAMTOR4Q0VGL1 99 aa22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms