RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 ERVK-21P61565 698 aa3.58□□□□□ -1.84
VPS41-206ENST00000418457 KIAA2012Q0VF49 1180 aa3.58□□□□□ -1.84
VPS41-206ENST00000418457 MTMR1Q13613 665 aa3.58□□□□□ -1.84
VPS41-206ENST00000418457 EIF4HQ15056 248 aaKnown RBP3.58□□□□□ -1.84
VPS41-206ENST00000418457 FSCN1Q16658 493 aaKnown RBP3.58□□□□□ -1.84
VPS41-206ENST00000418457 KRTAP19-4Q3LI73 84 aa3.58□□□□□ -1.84
VPS41-206ENST00000418457 CT83Q5H943 113 aa3.58□□□□□ -1.84
VPS41-206ENST00000418457 NT5DC1Q5TFE4 455 aa3.58□□□□□ -1.84
VPS41-206ENST00000418457 CCDC62Q6P9F0 684 aa3.58□□□□□ -1.84
VPS41-206ENST00000418457 BMP8AQ7Z5Y6 402 aa3.58□□□□□ -1.84
VPS41-206ENST00000418457 SIAH1Q8IUQ4 282 aa3.58□□□□□ -1.84
VPS41-206ENST00000418457 ANKRD13AQ8IZ07 590 aa3.58□□□□□ -1.84
VPS41-206ENST00000418457 LMBR1Q8WVP7 490 aa3.58□□□□□ -1.84
VPS41-206ENST00000418457 AJUBAQ96IF1 538 aa3.58□□□□□ -1.84
VPS41-206ENST00000418457 HIST1H2AHQ96KK5 128 aa3.58□□□□□ -1.84
VPS41-206ENST00000418457 HIST1H2AJQ99878 128 aa3.58□□□□□ -1.84
VPS41-206ENST00000418457 NOL10Q9BSC4 688 aaKnown RBP3.58□□□□□ -1.84
VPS41-206ENST00000418457 MENTQ9BUN1 341 aa3.58□□□□□ -1.84
VPS41-206ENST00000418457 CARD11Q9BXL7 1154 aa3.58□□□□□ -1.84
VPS41-206ENST00000418457 KRTAP4-8Q9BYQ9 185 aa3.58□□□□□ -1.84
VPS41-206ENST00000418457 TRIM8Q9BZR9 551 aa3.58□□□□□ -1.84
VPS41-206ENST00000418457 KATNBL1Q9H079 304 aa3.58□□□□□ -1.84
VPS41-206ENST00000418457 SAE1Q9UBE0 346 aaPredicted RBP3.58□□□□□ -1.84
VPS41-206ENST00000418457 MAGEL2Q9UJ55 1249 aa3.58□□□□□ -1.84
VPS41-206ENST00000418457 ADAM29Q9UKF5 820 aa3.58□□□□□ -1.84
VPS41-206ENST00000418457 DENND2AQ9ULE3 1009 aa3.58□□□□□ -1.84
VPS41-206ENST00000418457 SYNPO2Q9UMS6 1093 aa3.58□□□□□ -1.84
VPS41-206ENST00000418457 ZDHHC9Q9Y397 364 aa3.58□□□□□ -1.84
VPS41-206ENST00000418457 MYPNQ86TC9 1320 aa3.58□□□□□ -1.84
VPS41-206ENST00000418457 WASHC2CQ9Y4E1 1318 aa3.58□□□□□ -1.84
VPS41-206ENST00000418457 EEA1Q15075 1411 aa3.58□□□□□ -1.84
VPS41-206ENST00000418457 A0A0A6YYJ9 748 aa3.57□□□□□ -1.84
VPS41-206ENST00000418457 NOBOXO60393 691 aa3.57□□□□□ -1.84
VPS41-206ENST00000418457 OPHN1O60890 802 aa3.57□□□□□ -1.84
VPS41-206ENST00000418457 PFKMP08237 780 aa3.57□□□□□ -1.84
VPS41-206ENST00000418457 ENPP1P22413 925 aa3.57□□□□□ -1.84
VPS41-206ENST00000418457 CSF2RBP32927 897 aa3.57□□□□□ -1.84
VPS41-206ENST00000418457 MEOX1P50221 254 aa3.57□□□□□ -1.84
VPS41-206ENST00000418457 STAT5BP51692 787 aa3.57□□□□□ -1.84
VPS41-206ENST00000418457 KLF1Q13351 362 aaPredicted RBP3.57□□□□□ -1.84
VPS41-206ENST00000418457 USP10Q14694 798 aaKnown RBP3.57□□□□□ -1.84
VPS41-206ENST00000418457 UGT8Q16880 541 aa3.57□□□□□ -1.84
VPS41-206ENST00000418457 SYDE2Q5VT97 1194 aa3.57□□□□□ -1.84
VPS41-206ENST00000418457 BORAQ6PGQ7 559 aa3.57□□□□□ -1.84
VPS41-206ENST00000418457 LCNL1Q6ZST4 164 aa3.57□□□□□ -1.84
VPS41-206ENST00000418457 RALYLQ86SE5 291 aaKnown RBP3.57□□□□□ -1.84
VPS41-206ENST00000418457 FERMT3Q86UX7 667 aa3.57□□□□□ -1.84
VPS41-206ENST00000418457 CMIPQ8IY22 773 aa3.57□□□□□ -1.84
VPS41-206ENST00000418457 RTKN2Q8IZC4 609 aa3.57□□□□□ -1.84
VPS41-206ENST00000418457 CDYL2Q8N8U2 506 aa3.57□□□□□ -1.84
VPS41-206ENST00000418457 MARCH10Q8NA82 808 aaPredicted RBP3.57□□□□□ -1.84
VPS41-206ENST00000418457 TGFBRAP1Q8WUH2 860 aa3.57□□□□□ -1.84
VPS41-206ENST00000418457 EAF2Q96CJ1 260 aaPredicted RBP3.57□□□□□ -1.84
VPS41-206ENST00000418457 MBD6Q96DN6 1003 aa3.57□□□□□ -1.84
VPS41-206ENST00000418457 DYDC2Q96IM9 177 aa3.57□□□□□ -1.84
VPS41-206ENST00000418457 TYW1Q9NV66 732 aaKnown RBP3.57□□□□□ -1.84
VPS41-206ENST00000418457 USP40Q9NVE5 1235 aa3.57□□□□□ -1.84
VPS41-206ENST00000418457 POLR3BQ9NW08 1133 aaPredicted RBP3.57□□□□□ -1.84
VPS41-206ENST00000418457 DDX56Q9NY93 547 aaKnown RBP3.57□□□□□ -1.84
VPS41-206ENST00000418457 TRHDEQ9UKU6 1024 aa3.57□□□□□ -1.84
VPS41-206ENST00000418457 USP18Q9UMW8 372 aa3.57□□□□□ -1.84
VPS41-206ENST00000418457 PCDHB6Q9Y5E3 794 aa3.57□□□□□ -1.84
VPS41-206ENST00000418457 NUMBLQ9Y6R0 609 aa3.57□□□□□ -1.84
VPS41-206ENST00000418457 CC2D2AQ9P2K1 1620 aa3.56□□□□□ -1.84
VPS41-206ENST00000418457 LPLP06858 475 aa3.56□□□□□ -1.84
VPS41-206ENST00000418457 ZNF888P0CJ79 500 aaPredicted RBP3.56□□□□□ -1.84
VPS41-206ENST00000418457 XPAP23025 273 aaPredicted RBP3.56□□□□□ -1.84
VPS41-206ENST00000418457 GPR15P49685 360 aa3.56□□□□□ -1.84
VPS41-206ENST00000418457 RRADP55042 308 aa3.56□□□□□ -1.84
VPS41-206ENST00000418457 SESN2P58004 480 aaPredicted RBP3.56□□□□□ -1.84
VPS41-206ENST00000418457 ANTXR2P58335 489 aa3.56□□□□□ -1.84
VPS41-206ENST00000418457 JAG1P78504 1218 aa3.56□□□□□ -1.84
VPS41-206ENST00000418457 EXOSC10Q01780 885 aaKnown RBP3.56□□□□□ -1.84
VPS41-206ENST00000418457 PPARAQ07869 468 aa3.56□□□□□ -1.84
VPS41-206ENST00000418457 PCOLCEQ15113 449 aa3.56□□□□□ -1.84
VPS41-206ENST00000418457 CPEB4Q17RY0 729 aaKnown RBP eCLIP3.56□□□□□ -1.84
VPS41-206ENST00000418457 ZNF568Q3ZCX4 644 aa3.56□□□□□ -1.84
VPS41-206ENST00000418457 BRDTQ58F21 947 aaPredicted RBP3.56□□□□□ -1.84
VPS41-206ENST00000418457 ZMAT1Q5H9K5 638 aa3.56□□□□□ -1.84
VPS41-206ENST00000418457 PITRM1Q5JRX3 1037 aa3.56□□□□□ -1.84
VPS41-206ENST00000418457 TRIM68Q6AZZ1 485 aa3.56□□□□□ -1.84
VPS41-206ENST00000418457 KLHDC10Q6PID8 442 aa3.56□□□□□ -1.84
VPS41-206ENST00000418457 GPR155Q7Z3F1 870 aa3.56□□□□□ -1.84
VPS41-206ENST00000418457 KBTBD2Q8IY47 623 aa3.56□□□□□ -1.84
VPS41-206ENST00000418457 BCL6BQ8N143 479 aaPredicted RBP3.56□□□□□ -1.84
VPS41-206ENST00000418457 SYT8Q8NBV8 401 aa3.56□□□□□ -1.84
VPS41-206ENST00000418457 GAB3Q8WWW8 586 aa3.56□□□□□ -1.84
VPS41-206ENST00000418457 RSAD2Q8WXG1 361 aa3.56□□□□□ -1.84
VPS41-206ENST00000418457 RAX2Q96IS3 184 aa3.56□□□□□ -1.84
VPS41-206ENST00000418457 KCNC2Q96PR1 638 aa3.56□□□□□ -1.84
VPS41-206ENST00000418457 CEP89Q96ST8 783 aa3.56□□□□□ -1.84
VPS41-206ENST00000418457 HAPLN2Q9GZV7 340 aa3.56□□□□□ -1.84
VPS41-206ENST00000418457 CCDC8Q9H0W5 538 aaPredicted RBP3.56□□□□□ -1.84
VPS41-206ENST00000418457 KCTD10Q9H3F6 313 aa3.56□□□□□ -1.84
VPS41-206ENST00000418457 ZCCHC4Q9H5U6 513 aa3.56□□□□□ -1.84
VPS41-206ENST00000418457 DNAI1Q9UI46 699 aa3.56□□□□□ -1.84
VPS41-206ENST00000418457 FAM184BQ9ULE4 1060 aa3.56□□□□□ -1.84
VPS41-206ENST00000418457 EDARQ9UNE0 448 aa3.56□□□□□ -1.84
VPS41-206ENST00000418457 VWA7Q9Y334 891 aa3.56□□□□□ -1.84
VPS41-206ENST00000418457 GABRDO14764 452 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms