RNA–Protein interactions for RNA: ENST00000417508.1

VPS16-204, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-204ENST00000417508 CEP89Q96ST8 783 aa20.7■□□□□ 0.9
VPS16-204ENST00000417508 GCOM2Q9BZD3 368 aaPredicted RBP20.7■□□□□ 0.9
VPS16-204ENST00000417508 INO80BQ9C086 356 aaPredicted RBP20.7■□□□□ 0.9
VPS16-204ENST00000417508 SEPT9Q9UHD8 586 aaPredicted RBP20.7■□□□□ 0.9
VPS16-204ENST00000417508 PPME1Q9Y570 386 aa20.7■□□□□ 0.9
VPS16-204ENST00000417508 MUC3AQ02505 3323 aa20.7■□□□□ 0.9
VPS16-204ENST00000417508 XIRP2A4UGR9 3374 aa20.69■□□□□ 0.9
VPS16-204ENST00000417508 DDX11L8A8MPP1 907 aa20.69■□□□□ 0.9
VPS16-204ENST00000417508 H3BQ06 376 aaPredicted RBP20.69■□□□□ 0.9
VPS16-204ENST00000417508 SLC37A4O43826 429 aa20.69■□□□□ 0.9
VPS16-204ENST00000417508 CTDNEP1O95476 244 aa20.69■□□□□ 0.9
VPS16-204ENST00000417508 P4HBP07237 508 aaKnown RBP20.69■□□□□ 0.9
VPS16-204ENST00000417508 QARSP47897 775 aaKnown RBP20.69■□□□□ 0.9
VPS16-204ENST00000417508 GATMP50440 423 aa20.69■□□□□ 0.9
VPS16-204ENST00000417508 HYAL1Q12794 435 aa20.69■□□□□ 0.9
VPS16-204ENST00000417508 MTERF2Q49AM1 385 aa20.69■□□□□ 0.9
VPS16-204ENST00000417508 NLRP7Q8WX94 980 aa20.69■□□□□ 0.9
VPS16-204ENST00000417508 SCLT1Q96NL6 688 aa20.69■□□□□ 0.9
VPS16-204ENST00000417508 TMEM117Q9H0C3 514 aa20.69■□□□□ 0.9
VPS16-204ENST00000417508 BRMS1Q9HCU9 246 aa20.69■□□□□ 0.9
VPS16-204ENST00000417508 CHST12Q9NRB3 414 aa20.69■□□□□ 0.9
VPS16-204ENST00000417508 DACT1Q9NYF0 836 aa20.69■□□□□ 0.9
VPS16-204ENST00000417508 KIAA1671Q9BY89 1806 aa20.69■□□□□ 0.9
VPS16-204ENST00000417508 MARCH6O60337 910 aa20.68■□□□□ 0.9
VPS16-204ENST00000417508 CCNT1O60563 726 aaKnown RBP20.68■□□□□ 0.9
VPS16-204ENST00000417508 MAFO75444 373 aaPredicted RBP20.68■□□□□ 0.9
VPS16-204ENST00000417508 BAG4O95429 457 aaKnown RBP20.68■□□□□ 0.9
VPS16-204ENST00000417508 EOMESO95936 686 aa20.68■□□□□ 0.9
VPS16-204ENST00000417508 IBSPP21815 317 aaPredicted RBP20.68■□□□□ 0.9
VPS16-204ENST00000417508 LTBRP36941 435 aa20.68■□□□□ 0.9
VPS16-204ENST00000417508 PDE12Q6L8Q7 609 aaKnown RBP20.68■□□□□ 0.9
VPS16-204ENST00000417508 PIK3AP1Q6ZUJ8 805 aa20.68■□□□□ 0.9
VPS16-204ENST00000417508 POF1BQ8WVV4 589 aa20.68■□□□□ 0.9
VPS16-204ENST00000417508 TYW1Q9NV66 732 aaKnown RBP20.68■□□□□ 0.9
VPS16-204ENST00000417508 PRKAG3Q9UGI9 489 aa20.68■□□□□ 0.9
VPS16-204ENST00000417508 ATG2AQ2TAZ0 1938 aa20.68■□□□□ 0.9
VPS16-204ENST00000417508 A0A0U1RQF3 1178 aa20.67■□□□□ 0.9
VPS16-204ENST00000417508 IL9P15248 144 aa20.67■□□□□ 0.9
VPS16-204ENST00000417508 LAG3P18627 525 aa20.67■□□□□ 0.9
VPS16-204ENST00000417508 DNAJB1P25685 340 aa20.67■□□□□ 0.9
VPS16-204ENST00000417508 ADAM15Q13444 863 aa20.67■□□□□ 0.9
VPS16-204ENST00000417508 ANO5Q75V66 913 aa20.67■□□□□ 0.9
VPS16-204ENST00000417508 ZNF410Q86VK4 478 aa20.67■□□□□ 0.9
VPS16-204ENST00000417508 ECHDC2Q86YB7 292 aa20.67■□□□□ 0.9
VPS16-204ENST00000417508 SLFN12Q8IYM2 578 aa20.67■□□□□ 0.9
VPS16-204ENST00000417508 GJD3Q8N144 294 aa20.67■□□□□ 0.9
VPS16-204ENST00000417508 RSPH1Q8WYR4 309 aa20.67■□□□□ 0.9
VPS16-204ENST00000417508 GTF3C6Q969F1 213 aa20.67■□□□□ 0.9
VPS16-204ENST00000417508 VAV3Q9UKW4 847 aa20.67■□□□□ 0.9
VPS16-204ENST00000417508 FSD2A1L4K1 749 aa20.66■□□□□ 0.9
VPS16-204ENST00000417508 EML1O00423 815 aa20.66■□□□□ 0.9
VPS16-204ENST00000417508 FDPSP14324 419 aaKnown RBP20.66■□□□□ 0.9
VPS16-204ENST00000417508 KRT2P35908 639 aa20.66■□□□□ 0.9
VPS16-204ENST00000417508 NEK4P51957 841 aa20.66■□□□□ 0.9
VPS16-204ENST00000417508 EPHA7Q15375 998 aa20.66■□□□□ 0.9
VPS16-204ENST00000417508 ME3Q16798 604 aa20.66■□□□□ 0.9
VPS16-204ENST00000417508 ABI1Q8IZP0 508 aa20.66■□□□□ 0.9
VPS16-204ENST00000417508 COLGALT1Q8NBJ5 622 aa20.66■□□□□ 0.9
VPS16-204ENST00000417508 OXER1Q8TDS5 423 aa20.66■□□□□ 0.9
VPS16-204ENST00000417508 HAS1Q92839 578 aa20.66■□□□□ 0.9
VPS16-204ENST00000417508 TRAIPQ9BWF2 469 aa20.66■□□□□ 0.9
VPS16-204ENST00000417508 IGFLR1Q9H665 355 aa20.66■□□□□ 0.9
VPS16-204ENST00000417508 CWH43Q9H720 699 aa20.66■□□□□ 0.9
VPS16-204ENST00000417508 CYP26B1Q9NR63 512 aa20.66■□□□□ 0.9
VPS16-204ENST00000417508 SUCLA2Q9P2R7 463 aaPredicted RBP20.66■□□□□ 0.9
VPS16-204ENST00000417508 LZTS1Q9Y250 596 aa20.66■□□□□ 0.9
VPS16-204ENST00000417508 PI4K2BG5E9Z4 385 aa20.65■□□□□ 0.9
VPS16-204ENST00000417508 FGFR1P11362 822 aa20.65■□□□□ 0.9
VPS16-204ENST00000417508 COL9A1P20849 921 aa20.65■□□□□ 0.9
VPS16-204ENST00000417508 SFPQP23246 707 aaKnown RBP eCLIP20.65■□□□□ 0.9
VPS16-204ENST00000417508 OTUD6AQ7L8S5 288 aa20.65■□□□□ 0.9
VPS16-204ENST00000417508 C4orf19Q8IY42 314 aa20.65■□□□□ 0.9
VPS16-204ENST00000417508 THNSL1Q8IYQ7 743 aa20.65■□□□□ 0.9
VPS16-204ENST00000417508 EFHBQ8N7U6 833 aa20.65■□□□□ 0.9
VPS16-204ENST00000417508 CASD1Q96PB1 797 aa20.65■□□□□ 0.9
VPS16-204ENST00000417508 EPHX3Q9H6B9 360 aa20.65■□□□□ 0.9
VPS16-204ENST00000417508 GJB4Q9NTQ9 266 aa20.65■□□□□ 0.9
VPS16-204ENST00000417508 PUF60Q9UHX1 559 aaKnown RBP20.65■□□□□ 0.9
VPS16-204ENST00000417508 FGF18O76093 207 aa20.64■□□□□ 0.89
VPS16-204ENST00000417508 SKIP12755 728 aa20.64■□□□□ 0.89
VPS16-204ENST00000417508 PLCB3Q01970 1234 aa20.64■□□□□ 0.89
VPS16-204ENST00000417508 DRP2Q13474 957 aa20.64■□□□□ 0.89
VPS16-204ENST00000417508 NECAB1Q8N987 351 aa20.64■□□□□ 0.89
VPS16-204ENST00000417508 MICAL1Q8TDZ2 1067 aa20.64■□□□□ 0.89
VPS16-204ENST00000417508 SLC7A3Q8WY07 619 aa20.64■□□□□ 0.89
VPS16-204ENST00000417508 ZNF668Q96K58 619 aaPredicted RBP20.64■□□□□ 0.89
VPS16-204ENST00000417508 CD320Q9NPF0 282 aa20.64■□□□□ 0.89
VPS16-204ENST00000417508 TLR9Q9NR96 1032 aa20.64■□□□□ 0.89
VPS16-204ENST00000417508 A0A087WZ62 844 aa20.63■□□□□ 0.89
VPS16-204ENST00000417508 CARNS1A5YM72 827 aa20.63■□□□□ 0.89
VPS16-204ENST00000417508 TMEM150BA6NC51 233 aa20.63■□□□□ 0.89
VPS16-204ENST00000417508 GAS2O43903 313 aaKnown RBP20.63■□□□□ 0.89
VPS16-204ENST00000417508 SSTR3P32745 418 aaPredicted RBP20.63■□□□□ 0.89
VPS16-204ENST00000417508 PPM1AP35813 382 aa20.63■□□□□ 0.89
VPS16-204ENST00000417508 RFC5P40937 340 aa20.63■□□□□ 0.89
VPS16-204ENST00000417508 TRIM29Q14134 588 aa20.63■□□□□ 0.89
VPS16-204ENST00000417508 SMAD2Q15796 467 aaKnown RBP20.63■□□□□ 0.89
VPS16-204ENST00000417508 ZNF598Q86UK7 904 aaKnown RBP20.63■□□□□ 0.89
VPS16-204ENST00000417508 RHPN2Q8IUC4 686 aa20.63■□□□□ 0.89
VPS16-204ENST00000417508 LRRC43Q8N309 656 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms