RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 SCLT1Q96NL6 688 aa28.46■■■□□ 2.15
VEGFA-208ENST00000417285 SEPT9Q9UHD8 586 aaPredicted RBP28.46■■■□□ 2.15
VEGFA-208ENST00000417285 LOXHD1Q8IVV2 1947 aa28.45■■■□□ 2.15
VEGFA-208ENST00000417285 UBE3AQ05086 875 aa28.45■■■□□ 2.14
VEGFA-208ENST00000417285 PPP2R5CQ13362 524 aa28.45■■■□□ 2.14
VEGFA-208ENST00000417285 ME3Q16798 604 aa28.45■■■□□ 2.14
VEGFA-208ENST00000417285 MTERF2Q49AM1 385 aa28.45■■■□□ 2.14
VEGFA-208ENST00000417285 SPOUT1Q5T280 376 aaKnown RBP28.45■■■□□ 2.14
VEGFA-208ENST00000417285 NECAB1Q8N987 351 aa28.45■■■□□ 2.14
VEGFA-208ENST00000417285 NLRP7Q8WX94 980 aa28.45■■■□□ 2.14
VEGFA-208ENST00000417285 GTF3C6Q969F1 213 aa28.45■■■□□ 2.14
VEGFA-208ENST00000417285 JPH2Q9BR39 696 aaPredicted RBP28.45■■■□□ 2.14
VEGFA-208ENST00000417285 KCNMB3Q9NPA1 279 aa28.45■■■□□ 2.14
VEGFA-208ENST00000417285 IGKV6-21A0A0C4DH24 114 aa28.44■■■□□ 2.14
VEGFA-208ENST00000417285 SLC37A4O43826 429 aa28.44■■■□□ 2.14
VEGFA-208ENST00000417285 EXOC8Q8IYI6 725 aa28.44■■■□□ 2.14
VEGFA-208ENST00000417285 CEP89Q96ST8 783 aa28.44■■■□□ 2.14
VEGFA-208ENST00000417285 GCOM2Q9BZD3 368 aaPredicted RBP28.44■■■□□ 2.14
VEGFA-208ENST00000417285 TYW1Q9NV66 732 aaKnown RBP28.44■■■□□ 2.14
VEGFA-208ENST00000417285 MARCH6O60337 910 aa28.43■■■□□ 2.14
VEGFA-208ENST00000417285 CCNT1O60563 726 aaKnown RBP28.43■■■□□ 2.14
VEGFA-208ENST00000417285 MAFO75444 373 aaPredicted RBP28.43■■■□□ 2.14
VEGFA-208ENST00000417285 SEC24BO95487 1268 aa28.43■■■□□ 2.14
VEGFA-208ENST00000417285 LTBRP36941 435 aa28.43■■■□□ 2.14
VEGFA-208ENST00000417285 QARSP47897 775 aaKnown RBP28.43■■■□□ 2.14
VEGFA-208ENST00000417285 PIK3AP1Q6ZUJ8 805 aa28.43■■■□□ 2.14
VEGFA-208ENST00000417285 GJD3Q8N144 294 aa28.43■■■□□ 2.14
VEGFA-208ENST00000417285 POF1BQ8WVV4 589 aa28.43■■■□□ 2.14
VEGFA-208ENST00000417285 INO80BQ9C086 356 aaPredicted RBP28.43■■■□□ 2.14
VEGFA-208ENST00000417285 TMEM117Q9H0C3 514 aa28.43■■■□□ 2.14
VEGFA-208ENST00000417285 BRMS1Q9HCU9 246 aa28.43■■■□□ 2.14
VEGFA-208ENST00000417285 CHST12Q9NRB3 414 aa28.43■■■□□ 2.14
VEGFA-208ENST00000417285 IL9P15248 144 aa28.42■■■□□ 2.14
VEGFA-208ENST00000417285 DNAJB1P25685 340 aa28.42■■■□□ 2.14
VEGFA-208ENST00000417285 ADAM15Q13444 863 aa28.42■■■□□ 2.14
VEGFA-208ENST00000417285 OXER1Q8TDS5 423 aa28.42■■■□□ 2.14
VEGFA-208ENST00000417285 IGFLR1Q9H665 355 aa28.42■■■□□ 2.14
VEGFA-208ENST00000417285 GJB4Q9NTQ9 266 aa28.42■■■□□ 2.14
VEGFA-208ENST00000417285 DACT1Q9NYF0 836 aa28.42■■■□□ 2.14
VEGFA-208ENST00000417285 PRKAG3Q9UGI9 489 aa28.42■■■□□ 2.14
VEGFA-208ENST00000417285 VAV3Q9UKW4 847 aa28.42■■■□□ 2.14
VEGFA-208ENST00000417285 PPME1Q9Y570 386 aa28.42■■■□□ 2.14
VEGFA-208ENST00000417285 A0A0U1RQF3 1178 aa28.41■■■□□ 2.14
VEGFA-208ENST00000417285 DTNBO60941 627 aa28.41■■■□□ 2.14
VEGFA-208ENST00000417285 BAG4O95429 457 aaKnown RBP28.41■■■□□ 2.14
VEGFA-208ENST00000417285 LARGE1O95461 756 aa28.41■■■□□ 2.14
VEGFA-208ENST00000417285 EOMESO95936 686 aa28.41■■■□□ 2.14
VEGFA-208ENST00000417285 P4HBP07237 508 aaKnown RBP28.41■■■□□ 2.14
VEGFA-208ENST00000417285 ANO5Q75V66 913 aa28.41■■■□□ 2.14
VEGFA-208ENST00000417285 ECHDC2Q86YB7 292 aa28.41■■■□□ 2.14
VEGFA-208ENST00000417285 SUCLA2Q9P2R7 463 aaPredicted RBP28.41■■■□□ 2.14
VEGFA-208ENST00000417285 EML1O00423 815 aa28.4■■■□□ 2.14
VEGFA-208ENST00000417285 FGFR1P11362 822 aa28.4■■■□□ 2.14
VEGFA-208ENST00000417285 FDPSP14324 419 aaKnown RBP28.4■■■□□ 2.14
VEGFA-208ENST00000417285 LAG3P18627 525 aa28.4■■■□□ 2.14
VEGFA-208ENST00000417285 COL9A1P20849 921 aa28.4■■■□□ 2.14
VEGFA-208ENST00000417285 KRT2P35908 639 aa28.4■■■□□ 2.14
VEGFA-208ENST00000417285 PDE12Q6L8Q7 609 aaKnown RBP28.4■■■□□ 2.14
VEGFA-208ENST00000417285 ZNF410Q86VK4 478 aa28.4■■■□□ 2.14
VEGFA-208ENST00000417285 SLFN12Q8IYM2 578 aa28.4■■■□□ 2.14
VEGFA-208ENST00000417285 ABI1Q8IZP0 508 aa28.4■■■□□ 2.14
VEGFA-208ENST00000417285 ZNF668Q96K58 619 aaPredicted RBP28.4■■■□□ 2.14
VEGFA-208ENST00000417285 EPHX3Q9H6B9 360 aa28.4■■■□□ 2.14
VEGFA-208ENST00000417285 CD320Q9NPF0 282 aa28.4■■■□□ 2.14
VEGFA-208ENST00000417285 SSTR3P32745 418 aaPredicted RBP28.39■■■□□ 2.14
VEGFA-208ENST00000417285 DRP2Q13474 957 aa28.39■■■□□ 2.14
VEGFA-208ENST00000417285 EPHA7Q15375 998 aa28.39■■■□□ 2.14
VEGFA-208ENST00000417285 COLGALT1Q8NBJ5 622 aa28.39■■■□□ 2.14
VEGFA-208ENST00000417285 NSUN7Q8NE18 718 aaKnown RBP28.39■■■□□ 2.14
VEGFA-208ENST00000417285 MICAL1Q8TDZ2 1067 aa28.39■■■□□ 2.14
VEGFA-208ENST00000417285 HAS1Q92839 578 aa28.39■■■□□ 2.14
VEGFA-208ENST00000417285 CASD1Q96PB1 797 aa28.39■■■□□ 2.14
VEGFA-208ENST00000417285 CWH43Q9H720 699 aa28.39■■■□□ 2.14
VEGFA-208ENST00000417285 CYP26B1Q9NR63 512 aa28.39■■■□□ 2.14
VEGFA-208ENST00000417285 TMEM150BA6NC51 233 aa28.38■■■□□ 2.13
VEGFA-208ENST00000417285 FGF18O76093 207 aa28.38■■■□□ 2.13
VEGFA-208ENST00000417285 THNSL1Q8IYQ7 743 aa28.38■■■□□ 2.13
VEGFA-208ENST00000417285 EFHBQ8N7U6 833 aa28.38■■■□□ 2.13
VEGFA-208ENST00000417285 SLC7A3Q8WY07 619 aa28.38■■■□□ 2.13
VEGFA-208ENST00000417285 RSPH1Q8WYR4 309 aa28.38■■■□□ 2.13
VEGFA-208ENST00000417285 SH2D3AQ9BRG2 576 aa28.38■■■□□ 2.13
VEGFA-208ENST00000417285 PUF60Q9UHX1 559 aaKnown RBP28.38■■■□□ 2.13
VEGFA-208ENST00000417285 LZTS1Q9Y250 596 aa28.38■■■□□ 2.13
VEGFA-208ENST00000417285 A0A087WZ62 844 aa28.37■■■□□ 2.13
VEGFA-208ENST00000417285 PI4K2BG5E9Z4 385 aa28.37■■■□□ 2.13
VEGFA-208ENST00000417285 SFPQP23246 707 aaKnown RBP eCLIP28.37■■■□□ 2.13
VEGFA-208ENST00000417285 IRS1P35568 1242 aa28.37■■■□□ 2.13
VEGFA-208ENST00000417285 OTUD6AQ7L8S5 288 aa28.37■■■□□ 2.13
VEGFA-208ENST00000417285 RHPN2Q8IUC4 686 aa28.37■■■□□ 2.13
VEGFA-208ENST00000417285 FDXACB1Q9BRP7 624 aaPredicted RBP28.37■■■□□ 2.13
VEGFA-208ENST00000417285 TRAIPQ9BWF2 469 aa28.37■■■□□ 2.13
VEGFA-208ENST00000417285 TLR9Q9NR96 1032 aa28.37■■■□□ 2.13
VEGFA-208ENST00000417285 WDR81Q562E7 1941 aa28.36■■■□□ 2.13
VEGFA-208ENST00000417285 FSD2A1L4K1 749 aa28.36■■■□□ 2.13
VEGFA-208ENST00000417285 CSPG5O95196 566 aa28.36■■■□□ 2.13
VEGFA-208ENST00000417285 SKIP12755 728 aa28.36■■■□□ 2.13
VEGFA-208ENST00000417285 GTF2F1P35269 517 aaKnown RBP eCLIP28.36■■■□□ 2.133e-11■■■■■ 42.3
VEGFA-208ENST00000417285 PLCB3Q01970 1234 aa28.36■■■□□ 2.13
VEGFA-208ENST00000417285 DLX2Q07687 328 aaPredicted RBP28.36■■■□□ 2.13
VEGFA-208ENST00000417285 C4orf19Q8IY42 314 aa28.36■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms