RNA–Protein interactions for RNA: ENST00000417122.6

ITGB1-204, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-204ENST00000417122 ZSWIM4Q9H7M6 989 aa17.5■□□□□ 0.39
ITGB1-204ENST00000417122 TTC12Q9H892 705 aaPredicted RBP17.5■□□□□ 0.39
ITGB1-204ENST00000417122 RNF216Q9NWF9 866 aaPredicted RBP17.5■□□□□ 0.39
ITGB1-204ENST00000417122 PRUNE2Q8WUY3 3088 aa17.5■□□□□ 0.39
ITGB1-204ENST00000417122 SLITRK3O94933 977 aa17.49■□□□□ 0.39
ITGB1-204ENST00000417122 LINC00271P0C7V0 271 aa17.49■□□□□ 0.39
ITGB1-204ENST00000417122 DARSP14868 501 aaKnown RBP17.49■□□□□ 0.39
ITGB1-204ENST00000417122 YWHABP31946 246 aaKnown RBP17.49■□□□□ 0.39
ITGB1-204ENST00000417122 MCM7P33993 719 aa17.49■□□□□ 0.39
ITGB1-204ENST00000417122 BMPR1AP36894 532 aa17.49■□□□□ 0.39
ITGB1-204ENST00000417122 CYP4A11Q02928 519 aa17.49■□□□□ 0.39
ITGB1-204ENST00000417122 GNL2Q13823 731 aaKnown RBP17.49■□□□□ 0.39
ITGB1-204ENST00000417122 DSC3Q14574 896 aa17.49■□□□□ 0.39
ITGB1-204ENST00000417122 OTUD6AQ7L8S5 288 aa17.49■□□□□ 0.39
ITGB1-204ENST00000417122 TPH2Q8IWU9 490 aa17.49■□□□□ 0.39
ITGB1-204ENST00000417122 EXOC8Q8IYI6 725 aa17.49■□□□□ 0.39
ITGB1-204ENST00000417122 ZNF579Q8NAF0 562 aaKnown RBP17.49■□□□□ 0.39
ITGB1-204ENST00000417122 SLC7A3Q8WY07 619 aa17.49■□□□□ 0.39
ITGB1-204ENST00000417122 CLP1Q92989 425 aaKnown RBP17.49■□□□□ 0.39
ITGB1-204ENST00000417122 EIF2AK1Q9BQI3 630 aaKnown RBP17.49■□□□□ 0.39
ITGB1-204ENST00000417122 GCOM2Q9BZD3 368 aaPredicted RBP17.49■□□□□ 0.39
ITGB1-204ENST00000417122 SUCLA2Q9P2R7 463 aaPredicted RBP17.49■□□□□ 0.39
ITGB1-204ENST00000417122 PPME1Q9Y570 386 aa17.49■□□□□ 0.39
ITGB1-204ENST00000417122 ARID2Q68CP9 1835 aa17.49■□□□□ 0.39
ITGB1-204ENST00000417122 KIAA1671Q9BY89 1806 aa17.49■□□□□ 0.39
ITGB1-204ENST00000417122 FNDC1Q4ZHG4 1894 aaPredicted RBP17.48■□□□□ 0.39
ITGB1-204ENST00000417122 C5orf67F2Z3F1 127 aa17.48■□□□□ 0.39
ITGB1-204ENST00000417122 RB1P06400 928 aa17.48■□□□□ 0.39
ITGB1-204ENST00000417122 ZSCAN20P17040 1043 aaPredicted RBP17.48■□□□□ 0.39
ITGB1-204ENST00000417122 GATMP50440 423 aa17.48■□□□□ 0.39
ITGB1-204ENST00000417122 POLGP54098 1239 aaPredicted RBP17.48■□□□□ 0.39
ITGB1-204ENST00000417122 MRPS5P82675 430 aaKnown RBP17.48■□□□□ 0.39
ITGB1-204ENST00000417122 PTPROQ16827 1216 aa17.48■□□□□ 0.39
ITGB1-204ENST00000417122 PAN2Q504Q3 1202 aaKnown RBP17.48■□□□□ 0.39
ITGB1-204ENST00000417122 TJAP1Q5JTD0 557 aa17.48■□□□□ 0.39
ITGB1-204ENST00000417122 RHPN2Q8IUC4 686 aa17.48■□□□□ 0.39
ITGB1-204ENST00000417122 NEK9Q8TD19 979 aa17.48■□□□□ 0.39
ITGB1-204ENST00000417122 MRPL38Q96DV4 380 aaKnown RBP17.48■□□□□ 0.39
ITGB1-204ENST00000417122 TMEM60Q9H2L4 133 aa17.48■□□□□ 0.39
ITGB1-204ENST00000417122 DHX33Q9H6R0 707 aaKnown RBP17.48■□□□□ 0.39
ITGB1-204ENST00000417122 TRANK1O15050 2925 aa17.47■□□□□ 0.39
ITGB1-204ENST00000417122 A0A087WZ62 844 aa17.47■□□□□ 0.39
ITGB1-204ENST00000417122 CSDE1O75534 798 aaKnown RBP17.47■□□□□ 0.39
ITGB1-204ENST00000417122 FGFR4P22455 802 aa17.47■□□□□ 0.39
ITGB1-204ENST00000417122 RFC5P40937 340 aa17.47■□□□□ 0.39
ITGB1-204ENST00000417122 FAM189BP81408 668 aa17.47■□□□□ 0.39
ITGB1-204ENST00000417122 ZNF174Q15697 407 aa17.47■□□□□ 0.39
ITGB1-204ENST00000417122 XKR9Q5GH70 373 aa17.47■□□□□ 0.39
ITGB1-204ENST00000417122 ZNF410Q86VK4 478 aa17.47■□□□□ 0.39
ITGB1-204ENST00000417122 NOSTRINQ8IVI9 506 aa17.47■□□□□ 0.39
ITGB1-204ENST00000417122 SYMPKQ92797 1274 aaKnown RBP17.47■□□□□ 0.39
ITGB1-204ENST00000417122 TMX3Q96JJ7 454 aa17.47■□□□□ 0.39
ITGB1-204ENST00000417122 TBC1D32Q96NH3 1257 aa17.47■□□□□ 0.39
ITGB1-204ENST00000417122 ASB2Q96Q27 587 aa17.47■□□□□ 0.39
ITGB1-204ENST00000417122 HSD17B14Q9BPX1 270 aa17.47■□□□□ 0.39
ITGB1-204ENST00000417122 FDXACB1Q9BRP7 624 aaPredicted RBP17.47■□□□□ 0.39
ITGB1-204ENST00000417122 C11orf84Q9BUA3 381 aaPredicted RBP17.47■□□□□ 0.39
ITGB1-204ENST00000417122 ELAC1Q9H777 363 aaKnown RBP17.47■□□□□ 0.39
ITGB1-204ENST00000417122 TMEM161AQ9NX61 479 aa17.47■□□□□ 0.39
ITGB1-204ENST00000417122 COG5Q9UP83 839 aa17.47■□□□□ 0.39
ITGB1-204ENST00000417122 MRPL42Q9Y6G3 142 aaKnown RBP17.47■□□□□ 0.39
ITGB1-204ENST00000417122 POTEMA6NI47 508 aa17.46■□□□□ 0.39
ITGB1-204ENST00000417122 ZBTB39O15060 712 aa17.46■□□□□ 0.39
ITGB1-204ENST00000417122 LYPLA2O95372 231 aa17.46■□□□□ 0.39
ITGB1-204ENST00000417122 CD2BP2O95400 341 aaKnown RBP17.46■□□□□ 0.39
ITGB1-204ENST00000417122 ORC2Q13416 577 aaPredicted RBP17.46■□□□□ 0.39
ITGB1-204ENST00000417122 TTC38Q5R3I4 469 aa17.46■□□□□ 0.39
ITGB1-204ENST00000417122 FAM102BQ5T8I3 360 aa17.46■□□□□ 0.39
ITGB1-204ENST00000417122 KSR1Q8IVT5 923 aa17.46■□□□□ 0.39
ITGB1-204ENST00000417122 NLRP4Q96MN2 994 aa17.46■□□□□ 0.39
ITGB1-204ENST00000417122 PLVAPQ9BX97 442 aa17.46■□□□□ 0.39
ITGB1-204ENST00000417122 INO80BQ9C086 356 aaPredicted RBP17.46■□□□□ 0.39
ITGB1-204ENST00000417122 ATP6V0A4Q9HBG4 840 aa17.46■□□□□ 0.39
ITGB1-204ENST00000417122 BMP2KQ9NSY1 1161 aaPredicted RBP17.46■□□□□ 0.39
ITGB1-204ENST00000417122 KIF3AQ9Y496 699 aa17.46■□□□□ 0.39
ITGB1-204ENST00000417122 TBKBP1A7MCY6 615 aa17.45■□□□□ 0.38
ITGB1-204ENST00000417122 GAS2O43903 313 aaKnown RBP17.45■□□□□ 0.38
ITGB1-204ENST00000417122 SFPQP23246 707 aaKnown RBP eCLIP17.45■□□□□ 0.38
ITGB1-204ENST00000417122 U2AF2P26368 475 aaKnown RBP eCLIP17.45■□□□□ 0.38
ITGB1-204ENST00000417122 TRAPPC10P48553 1259 aa17.45■□□□□ 0.38
ITGB1-204ENST00000417122 MCM2P49736 904 aa17.45■□□□□ 0.38
ITGB1-204ENST00000417122 TFF2Q03403 129 aa17.45■□□□□ 0.38
ITGB1-204ENST00000417122 EMC2Q15006 297 aa17.45■□□□□ 0.38
ITGB1-204ENST00000417122 AAK1Q2M2I8 961 aa17.45■□□□□ 0.38
ITGB1-204ENST00000417122 TCP11Q8WWU5 503 aa17.45■□□□□ 0.38
ITGB1-204ENST00000417122 PSPC1Q8WXF1 523 aaKnown RBP17.45■□□□□ 0.38
ITGB1-204ENST00000417122 HLA-CQ95604 372 aa17.45■□□□□ 0.38
ITGB1-204ENST00000417122 TMEM143Q96AN5 459 aa17.45■□□□□ 0.38
ITGB1-204ENST00000417122 NOL7Q9UMY1 257 aaKnown RBP17.45■□□□□ 0.38
ITGB1-204ENST00000417122 COL4A3BPQ9Y5P4 624 aa17.45■□□□□ 0.38
ITGB1-204ENST00000417122 GRM6O15303 877 aa17.44■□□□□ 0.38
ITGB1-204ENST00000417122 OR52Z1P0C646 297 aa17.44■□□□□ 0.38
ITGB1-204ENST00000417122 TECP42680 631 aa17.44■□□□□ 0.38
ITGB1-204ENST00000417122 TIGD5Q53EQ6 642 aa17.44■□□□□ 0.38
ITGB1-204ENST00000417122 PRPF31Q8WWY3 499 aaKnown RBP17.44■□□□□ 0.38
ITGB1-204ENST00000417122 P2RX5Q93086 422 aa17.44■□□□□ 0.38
ITGB1-204ENST00000417122 MTRQ99707 1265 aa17.44■□□□□ 0.38
ITGB1-204ENST00000417122 LMAN2LQ9H0V9 348 aa17.44■□□□□ 0.38
ITGB1-204ENST00000417122 CHST12Q9NRB3 414 aa17.44■□□□□ 0.38
ITGB1-204ENST00000417122 ANKEF1Q9NU02 776 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms