RNA–Protein interactions for RNA: ENST00000416778.5

CPNE1-210, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-210ENST00000416778 QARSP47897 775 aaKnown RBP20.08■□□□□ 0.81
CPNE1-210ENST00000416778 ST3GAL1Q11201 340 aa20.08■□□□□ 0.81
CPNE1-210ENST00000416778 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.08■□□□□ 0.81
CPNE1-210ENST00000416778 SEPT9Q9UHD8 586 aaPredicted RBP20.08■□□□□ 0.81
CPNE1-210ENST00000416778 TCF20Q9UGU0 1960 aaKnown RBP20.07■□□□□ 0.8
CPNE1-210ENST00000416778 BTBD18B2RXH4 712 aa20.07■□□□□ 0.8
CPNE1-210ENST00000416778 ITGB1P05556 798 aa20.07■□□□□ 0.8
CPNE1-210ENST00000416778 P4HBP07237 508 aaKnown RBP20.07■□□□□ 0.8
CPNE1-210ENST00000416778 IBSPP21815 317 aaPredicted RBP20.07■□□□□ 0.8
CPNE1-210ENST00000416778 KCNA5P22460 613 aa20.07■□□□□ 0.8
CPNE1-210ENST00000416778 DNAJB1P25685 340 aa20.07■□□□□ 0.8
CPNE1-210ENST00000416778 EPHA7Q15375 998 aa20.07■□□□□ 0.8
CPNE1-210ENST00000416778 ZNF579Q8NAF0 562 aaKnown RBP20.07■□□□□ 0.8
CPNE1-210ENST00000416778 KLHL23Q8NBE8 558 aa20.07■□□□□ 0.8
CPNE1-210ENST00000416778 NEK9Q8TD19 979 aa20.07■□□□□ 0.8
CPNE1-210ENST00000416778 TMEM161AQ9NX61 479 aa20.07■□□□□ 0.8
CPNE1-210ENST00000416778 WRAP73Q9P2S5 460 aaPredicted RBP20.07■□□□□ 0.8
CPNE1-210ENST00000416778 MMP1P03956 469 aa20.06■□□□□ 0.8
CPNE1-210ENST00000416778 ZSCAN20P17040 1043 aaPredicted RBP20.06■□□□□ 0.8
CPNE1-210ENST00000416778 DNM2P50570 870 aa20.06■□□□□ 0.8
CPNE1-210ENST00000416778 SPIRE1Q08AE8 756 aa20.06■□□□□ 0.8
CPNE1-210ENST00000416778 PABPC5Q96DU9 382 aaKnown RBP20.06■□□□□ 0.8
CPNE1-210ENST00000416778 ATP6V0A4Q9HBG4 840 aa20.06■□□□□ 0.8
CPNE1-210ENST00000416778 TYW1Q9NV66 732 aaKnown RBP20.06■□□□□ 0.8
CPNE1-210ENST00000416778 SUCLA2Q9P2R7 463 aaPredicted RBP20.06■□□□□ 0.8
CPNE1-210ENST00000416778 LIMCH1Q9UPQ0 1083 aa20.06■□□□□ 0.8
CPNE1-210ENST00000416778 TBKBP1A7MCY6 615 aa20.05■□□□□ 0.8
CPNE1-210ENST00000416778 NCK2O43639 380 aa20.05■□□□□ 0.8
CPNE1-210ENST00000416778 MARCH6O60337 910 aa20.05■□□□□ 0.8
CPNE1-210ENST00000416778 CSDE1O75534 798 aaKnown RBP20.05■□□□□ 0.8
CPNE1-210ENST00000416778 BAG4O95429 457 aaKnown RBP20.05■□□□□ 0.8
CPNE1-210ENST00000416778 FGFR4P22455 802 aa20.05■□□□□ 0.8
CPNE1-210ENST00000416778 NPEPPSP55786 919 aa20.05■□□□□ 0.8
CPNE1-210ENST00000416778 CTC1Q2NKJ3 1217 aa20.05■□□□□ 0.8
CPNE1-210ENST00000416778 POTEDQ86YR6 584 aa20.05■□□□□ 0.8
CPNE1-210ENST00000416778 SLFN12Q8IYM2 578 aa20.05■□□□□ 0.8
CPNE1-210ENST00000416778 KIF2CQ99661 725 aa20.05■□□□□ 0.8
CPNE1-210ENST00000416778 CYP26B1Q9NR63 512 aa20.05■□□□□ 0.8
CPNE1-210ENST00000416778 RNF19AQ9NV58 838 aa20.05■□□□□ 0.8
CPNE1-210ENST00000416778 RGL1Q9NZL6 768 aa20.05■□□□□ 0.8
CPNE1-210ENST00000416778 DKC1O60832 514 aaKnown RBP eCLIP20.04■□□□□ 0.8
CPNE1-210ENST00000416778 SLITRK3O94933 977 aa20.04■□□□□ 0.8
CPNE1-210ENST00000416778 FGFR1P11362 822 aa20.04■□□□□ 0.8
CPNE1-210ENST00000416778 LTBRP36941 435 aa20.04■□□□□ 0.8
CPNE1-210ENST00000416778 HYAL1Q12794 435 aa20.04■□□□□ 0.8
CPNE1-210ENST00000416778 LRRC55Q6ZSA7 311 aa20.04■□□□□ 0.8
CPNE1-210ENST00000416778 ECHDC2Q86YB7 292 aa20.04■□□□□ 0.8
CPNE1-210ENST00000416778 C4orf19Q8IY42 314 aa20.04■□□□□ 0.8
CPNE1-210ENST00000416778 NLRP7Q8WX94 980 aa20.04■□□□□ 0.8
CPNE1-210ENST00000416778 CASD1Q96PB1 797 aa20.04■□□□□ 0.8
CPNE1-210ENST00000416778 GCOM2Q9BZD3 368 aaPredicted RBP20.04■□□□□ 0.8
CPNE1-210ENST00000416778 CWH43Q9H720 699 aa20.04■□□□□ 0.8
CPNE1-210ENST00000416778 BRMS1Q9HCU9 246 aa20.04■□□□□ 0.8
CPNE1-210ENST00000416778 WDR81Q562E7 1941 aa20.04■□□□□ 0.8
CPNE1-210ENST00000416778 A0A087WZ62 844 aa20.03■□□□□ 0.8
CPNE1-210ENST00000416778 A0A0U1RQF3 1178 aa20.03■□□□□ 0.8
CPNE1-210ENST00000416778 GRXCR2A6NFK2 248 aa20.03■□□□□ 0.8
CPNE1-210ENST00000416778 ZBTB39O15060 712 aa20.03■□□□□ 0.8
CPNE1-210ENST00000416778 PLA2G4FQ68DD2 849 aa20.03■□□□□ 0.8
CPNE1-210ENST00000416778 KSR1Q8IVT5 923 aa20.03■□□□□ 0.8
CPNE1-210ENST00000416778 DIS3L2Q8IYB7 885 aaKnown RBP20.03■□□□□ 0.8
CPNE1-210ENST00000416778 POF1BQ8WVV4 589 aa20.03■□□□□ 0.8
CPNE1-210ENST00000416778 DYDC2Q96IM9 177 aa20.03■□□□□ 0.8
CPNE1-210ENST00000416778 HSD17B14Q9BPX1 270 aa20.03■□□□□ 0.8
CPNE1-210ENST00000416778 JPH2Q9BR39 696 aaPredicted RBP20.03■□□□□ 0.8
CPNE1-210ENST00000416778 FDXACB1Q9BRP7 624 aaPredicted RBP20.03■□□□□ 0.8
CPNE1-210ENST00000416778 DHX33Q9H6R0 707 aaKnown RBP20.03■□□□□ 0.8
CPNE1-210ENST00000416778 CHST12Q9NRB3 414 aa20.03■□□□□ 0.8
CPNE1-210ENST00000416778 PCDHA12Q9UN75 941 aa20.03■□□□□ 0.8
CPNE1-210ENST00000416778 H3BQ06 376 aaPredicted RBP20.02■□□□□ 0.8
CPNE1-210ENST00000416778 WNT7AO00755 349 aa20.02■□□□□ 0.8
CPNE1-210ENST00000416778 EOMESO95936 686 aa20.02■□□□□ 0.8
CPNE1-210ENST00000416778 IRS1P35568 1242 aa20.02■□□□□ 0.8
CPNE1-210ENST00000416778 C8orf34Q49A92 452 aa20.02■□□□□ 0.8
CPNE1-210ENST00000416778 ZNF598Q86UK7 904 aaKnown RBP20.02■□□□□ 0.8
CPNE1-210ENST00000416778 ZNF410Q86VK4 478 aa20.02■□□□□ 0.8
CPNE1-210ENST00000416778 RHPN2Q8IUC4 686 aa20.02■□□□□ 0.8
CPNE1-210ENST00000416778 CEP170P1Q96L14 293 aa20.02■□□□□ 0.8
CPNE1-210ENST00000416778 SCLT1Q96NL6 688 aa20.02■□□□□ 0.8
CPNE1-210ENST00000416778 MTMR9Q96QG7 549 aa20.02■□□□□ 0.8
CPNE1-210ENST00000416778 TMEM117Q9H0C3 514 aa20.02■□□□□ 0.8
CPNE1-210ENST00000416778 ZSWIM4Q9H7M6 989 aa20.02■□□□□ 0.8
CPNE1-210ENST00000416778 CD320Q9NPF0 282 aa20.02■□□□□ 0.8
CPNE1-210ENST00000416778 HCSTQ9UBK5 93 aa20.02■□□□□ 0.8
CPNE1-210ENST00000416778 PPME1Q9Y570 386 aa20.02■□□□□ 0.8
CPNE1-210ENST00000416778 PCDHB12Q9Y5F1 795 aa20.02■□□□□ 0.8
CPNE1-210ENST00000416778 RALGAPA2Q2PPJ7 1873 aa20.01■□□□□ 0.79
CPNE1-210ENST00000416778 NLRC5Q86WI3 1866 aa20.01■□□□□ 0.79
CPNE1-210ENST00000416778 YWHABP31946 246 aaKnown RBP20.01■□□□□ 0.79
CPNE1-210ENST00000416778 GTF2F1P35269 517 aaKnown RBP eCLIP20.01■□□□□ 0.796e-10■■■□□ 14.7
CPNE1-210ENST00000416778 FOSBP53539 338 aa20.01■□□□□ 0.79
CPNE1-210ENST00000416778 ADAM15Q13444 863 aa20.01■□□□□ 0.79
CPNE1-210ENST00000416778 TRIM29Q14134 588 aa20.01■□□□□ 0.79
CPNE1-210ENST00000416778 CTTNQ14247 550 aaKnown RBP20.01■□□□□ 0.79
CPNE1-210ENST00000416778 PUS10Q3MIT2 529 aaKnown RBP20.01■□□□□ 0.79
CPNE1-210ENST00000416778 NCAPH2Q6IBW4 605 aa20.01■□□□□ 0.79
CPNE1-210ENST00000416778 PTCRAQ6ISU1 281 aaPredicted RBP20.01■□□□□ 0.79
CPNE1-210ENST00000416778 OTUD6AQ7L8S5 288 aa20.01■□□□□ 0.79
CPNE1-210ENST00000416778 FAM178BQ8IXR5 827 aa20.01■□□□□ 0.79
CPNE1-210ENST00000416778 EXOC8Q8IYI6 725 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms