RNA–Protein interactions for RNA: ENST00000416688.5

CTDSPL-203, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-203ENST00000416688 GDAP1Q8TB36 358 aa3.47□□□□□ -1.85
CTDSPL-203ENST00000416688 RNF217Q8TC41 542 aa3.47□□□□□ -1.85
CTDSPL-203ENST00000416688 HSPH1Q92598 858 aa3.47□□□□□ -1.85
CTDSPL-203ENST00000416688 HTRA1Q92743 480 aa3.47□□□□□ -1.85
CTDSPL-203ENST00000416688 TEKT1Q969V4 418 aa3.47□□□□□ -1.85
CTDSPL-203ENST00000416688 NSUN4Q96CB9 384 aaKnown RBP3.47□□□□□ -1.85
CTDSPL-203ENST00000416688 ATG4CQ96DT6 458 aa3.47□□□□□ -1.85
CTDSPL-203ENST00000416688 CHFRQ96EP1 664 aa3.47□□□□□ -1.85
CTDSPL-203ENST00000416688 RRP36Q96EU6 259 aaKnown RBP3.47□□□□□ -1.85
CTDSPL-203ENST00000416688 VPS39Q96JC1 886 aa3.47□□□□□ -1.85
CTDSPL-203ENST00000416688 FEM1CQ96JP0 617 aa3.47□□□□□ -1.85
CTDSPL-203ENST00000416688 CLMNQ96JQ2 1002 aa3.47□□□□□ -1.85
CTDSPL-203ENST00000416688 SUSD3Q96L08 255 aa3.47□□□□□ -1.85
CTDSPL-203ENST00000416688 CCDC140Q96MF4 163 aa3.47□□□□□ -1.85
CTDSPL-203ENST00000416688 AGAP3Q96P47 875 aa3.47□□□□□ -1.85
CTDSPL-203ENST00000416688 GAS2L1Q99501 681 aaPredicted RBP3.47□□□□□ -1.85
CTDSPL-203ENST00000416688 HAUS7Q99871 368 aa3.47□□□□□ -1.85
CTDSPL-203ENST00000416688 SLX1AQ9BQ83 275 aa3.47□□□□□ -1.85
CTDSPL-203ENST00000416688 TACO1Q9BSH4 297 aaKnown RBP3.47□□□□□ -1.85
CTDSPL-203ENST00000416688 HGH1Q9BTY7 390 aa3.47□□□□□ -1.85
CTDSPL-203ENST00000416688 COLEC11Q9BWP8 271 aa3.47□□□□□ -1.85
CTDSPL-203ENST00000416688 SORBS1Q9BX66 1292 aaKnown RBP3.47□□□□□ -1.85
CTDSPL-203ENST00000416688 B3GNT5Q9BYG0 378 aa3.47□□□□□ -1.85
CTDSPL-203ENST00000416688 SENP6Q9GZR1 1112 aaPredicted RBP3.47□□□□□ -1.85
CTDSPL-203ENST00000416688 OR10A4Q9H209 315 aa3.47□□□□□ -1.85
CTDSPL-203ENST00000416688 RABEP2Q9H5N1 569 aa3.47□□□□□ -1.85
CTDSPL-203ENST00000416688 SYNCQ9H7C4 482 aa3.47□□□□□ -1.85
CTDSPL-203ENST00000416688 SPON1Q9HCB6 807 aa3.47□□□□□ -1.85
CTDSPL-203ENST00000416688 PNPLA8Q9NP80 782 aa3.47□□□□□ -1.85
CTDSPL-203ENST00000416688 DCP1AQ9NPI6 582 aaPredicted RBP3.47□□□□□ -1.85
CTDSPL-203ENST00000416688 DISC1Q9NRI5 854 aa3.47□□□□□ -1.85
CTDSPL-203ENST00000416688 MBIPQ9NS73 344 aa3.47□□□□□ -1.85
CTDSPL-203ENST00000416688 TBCCD1Q9NVR7 557 aa3.47□□□□□ -1.85
CTDSPL-203ENST00000416688 ADPRHL2Q9NX46 363 aa3.47□□□□□ -1.85
CTDSPL-203ENST00000416688 SEPT10Q9P0V9 454 aa3.47□□□□□ -1.85
CTDSPL-203ENST00000416688 USP36Q9P275 1121 aaKnown RBP3.47□□□□□ -1.85
CTDSPL-203ENST00000416688 ZNF624Q9P2J8 865 aaPredicted RBP3.47□□□□□ -1.85
CTDSPL-203ENST00000416688 GRHPRQ9UBQ7 328 aa3.47□□□□□ -1.85
CTDSPL-203ENST00000416688 RPS6KA6Q9UK32 745 aa3.47□□□□□ -1.85
CTDSPL-203ENST00000416688 CORO2BQ9UQ03 480 aa3.47□□□□□ -1.85
CTDSPL-203ENST00000416688 MRPL11Q9Y3B7 192 aaKnown RBP3.47□□□□□ -1.85
CTDSPL-203ENST00000416688 SNX8Q9Y5X2 465 aa3.47□□□□□ -1.85
CTDSPL-203ENST00000416688 SQORQ9Y6N5 450 aa3.47□□□□□ -1.85
CTDSPL-203ENST00000416688 LOC102724428A0A0B4J2F2 783 aa3.46□□□□□ -1.86
CTDSPL-203ENST00000416688 POM121BA6NF01 834 aa3.46□□□□□ -1.86
CTDSPL-203ENST00000416688 CCDC169A6NNP5 214 aa3.46□□□□□ -1.86
CTDSPL-203ENST00000416688 A8MVJ9 347 aa3.46□□□□□ -1.86
CTDSPL-203ENST00000416688 DDX39AO00148 427 aaKnown RBP3.46□□□□□ -1.86
CTDSPL-203ENST00000416688 AP3D1O14617 1153 aa3.46□□□□□ -1.86
CTDSPL-203ENST00000416688 CAPN9O14815 690 aa3.46□□□□□ -1.86
CTDSPL-203ENST00000416688 CTAGE5O15320 804 aa3.46□□□□□ -1.86
CTDSPL-203ENST00000416688 TXNL1O43396 289 aa3.46□□□□□ -1.86
CTDSPL-203ENST00000416688 ZBTB14O43829 449 aa3.46□□□□□ -1.86
CTDSPL-203ENST00000416688 KLHL41O60662 606 aa3.46□□□□□ -1.86
CTDSPL-203ENST00000416688 SRGAP2O75044 1071 aa3.46□□□□□ -1.86
CTDSPL-203ENST00000416688 AOC2O75106 756 aa3.46□□□□□ -1.86
CTDSPL-203ENST00000416688 PPFIA2O75334 1257 aa3.46□□□□□ -1.86
CTDSPL-203ENST00000416688 GLRX3O76003 335 aaKnown RBP3.46□□□□□ -1.86
CTDSPL-203ENST00000416688 SASH1O94885 1247 aa3.46□□□□□ -1.86
CTDSPL-203ENST00000416688 IPO7O95373 1038 aaKnown RBP3.46□□□□□ -1.86
CTDSPL-203ENST00000416688 SLU7O95391 586 aaKnown RBP3.46□□□□□ -1.86
CTDSPL-203ENST00000416688 SCGB1D1O95968 90 aa3.46□□□□□ -1.86
CTDSPL-203ENST00000416688 EGFRP00533 1210 aa3.46□□□□□ -1.86
CTDSPL-203ENST00000416688 IL2RAP01589 272 aa3.46□□□□□ -1.86
CTDSPL-203ENST00000416688 OPN1MWP04001 364 aa3.46□□□□□ -1.86
CTDSPL-203ENST00000416688 SOD2P04179 222 aa3.46□□□□□ -1.86
CTDSPL-203ENST00000416688 RHOXF2BP0C7M4 288 aa3.46□□□□□ -1.86
CTDSPL-203ENST00000416688 OPN1MW2P0DN77 364 aa3.46□□□□□ -1.86
CTDSPL-203ENST00000416688 OPN1MW3P0DN78 364 aa3.46□□□□□ -1.86
CTDSPL-203ENST00000416688 MYF5P13349 255 aa3.46□□□□□ -1.86
CTDSPL-203ENST00000416688 VEGFAP15692 232 aaPredicted RBP3.46□□□□□ -1.86
CTDSPL-203ENST00000416688 RAG1P15918 1043 aa3.46□□□□□ -1.86
CTDSPL-203ENST00000416688 IL11P20809 199 aa3.46□□□□□ -1.86
CTDSPL-203ENST00000416688 PDCP20941 246 aa3.46□□□□□ -1.86
CTDSPL-203ENST00000416688 ENPP1P22413 925 aa3.46□□□□□ -1.86
CTDSPL-203ENST00000416688 HTR1BP28222 390 aa3.46□□□□□ -1.86
CTDSPL-203ENST00000416688 TMOD1P28289 359 aa3.46□□□□□ -1.86
CTDSPL-203ENST00000416688 PDIA3P30101 505 aaKnown RBP3.46□□□□□ -1.86
CTDSPL-203ENST00000416688 MXI1P50539 228 aa3.46□□□□□ -1.86
CTDSPL-203ENST00000416688 TUBP50607 506 aa3.46□□□□□ -1.86
CTDSPL-203ENST00000416688 AFF3P51826 1226 aaKnown RBP3.46□□□□□ -1.86
CTDSPL-203ENST00000416688 AGFG1P52594 562 aaKnown RBP3.46□□□□□ -1.86
CTDSPL-203ENST00000416688 NR1H2P55055 460 aa3.46□□□□□ -1.86
CTDSPL-203ENST00000416688 SIK1P57059 783 aa3.46□□□□□ -1.86
CTDSPL-203ENST00000416688 PPARDQ03181 441 aa3.46□□□□□ -1.86
CTDSPL-203ENST00000416688 PDE4BQ07343 736 aa3.46□□□□□ -1.86
CTDSPL-203ENST00000416688 SLC20A2Q08357 652 aa3.46□□□□□ -1.86
CTDSPL-203ENST00000416688 GALNT1Q10472 559 aaPredicted RBP3.46□□□□□ -1.86
CTDSPL-203ENST00000416688 ERV3-1Q14264 604 aa3.46□□□□□ -1.86
CTDSPL-203ENST00000416688 KCNB1Q14721 858 aa3.46□□□□□ -1.86
CTDSPL-203ENST00000416688 ACAP1Q15027 740 aa3.46□□□□□ -1.86
CTDSPL-203ENST00000416688 PPA1Q15181 289 aa3.46□□□□□ -1.86
CTDSPL-203ENST00000416688 GEN1Q17RS7 908 aa3.46□□□□□ -1.86
CTDSPL-203ENST00000416688 TMEM266Q2M3C6 531 aa3.46□□□□□ -1.86
CTDSPL-203ENST00000416688 WSCD2Q2TBF2 565 aa3.46□□□□□ -1.86
CTDSPL-203ENST00000416688 PGS1Q32NB8 556 aa3.46□□□□□ -1.86
CTDSPL-203ENST00000416688 C2orf76Q3KRA6 126 aa3.46□□□□□ -1.86
CTDSPL-203ENST00000416688 TJAP1Q5JTD0 557 aa3.46□□□□□ -1.86
CTDSPL-203ENST00000416688 BROXQ5VW32 411 aa3.46□□□□□ -1.86
CTDSPL-203ENST00000416688 CEP135Q66GS9 1140 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms