RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 MAML1Q92585 1016 aa13.84□□□□□ -0.19
SCN1B-202ENST00000415950 CYFIP2Q96F07 1278 aa13.84□□□□□ -0.19
SCN1B-202ENST00000415950 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.84□□□□□ -0.19
SCN1B-202ENST00000415950 BARHL2Q9NY43 387 aa13.84□□□□□ -0.19
SCN1B-202ENST00000415950 SUFUQ9UMX1 484 aa13.84□□□□□ -0.19
SCN1B-202ENST00000415950 FNDC3AQ9Y2H6 1198 aaKnown RBP13.84□□□□□ -0.19
SCN1B-202ENST00000415950 COL3A1P02461 1466 aaPredicted RBP13.84□□□□□ -0.19
SCN1B-202ENST00000415950 CDHR2Q9BYE9 1310 aa13.84□□□□□ -0.19
SCN1B-202ENST00000415950 EVI5O60447 810 aa13.84□□□□□ -0.19
SCN1B-202ENST00000415950 MYBL2P10244 700 aa13.84□□□□□ -0.19
SCN1B-202ENST00000415950 LCA5Q86VQ0 697 aa13.84□□□□□ -0.19
SCN1B-202ENST00000415950 PASD1Q8IV76 773 aa13.84□□□□□ -0.19
SCN1B-202ENST00000415950 NXF1Q9UBU9 619 aaKnown RBP13.84□□□□□ -0.19
SCN1B-202ENST00000415950 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.84□□□□□ -0.19
SCN1B-202ENST00000415950 LMTK3Q96Q04 1460 aa13.84□□□□□ -0.19
SCN1B-202ENST00000415950 TCP11X1B4DZS4 312 aa13.84□□□□□ -0.19
SCN1B-202ENST00000415950 RASA4BC9J798 803 aa13.84□□□□□ -0.19
SCN1B-202ENST00000415950 RASA4O43374 803 aa13.84□□□□□ -0.19
SCN1B-202ENST00000415950 NR3C1P04150 777 aa13.84□□□□□ -0.19
SCN1B-202ENST00000415950 SKIP12755 728 aa13.84□□□□□ -0.19
SCN1B-202ENST00000415950 TROAPQ12815 778 aa13.84□□□□□ -0.19
SCN1B-202ENST00000415950 C6orf118Q5T5N4 469 aa13.84□□□□□ -0.19
SCN1B-202ENST00000415950 RAD54LQ92698 747 aa13.84□□□□□ -0.19
SCN1B-202ENST00000415950 RGL1Q9NZL6 768 aa13.84□□□□□ -0.19
SCN1B-202ENST00000415950 CAMSAP1Q5T5Y3 1602 aa13.84□□□□□ -0.19
SCN1B-202ENST00000415950 PDE2AO00408 941 aaPredicted RBP13.83□□□□□ -0.19
SCN1B-202ENST00000415950 TTLL1O95922 423 aa13.83□□□□□ -0.19
SCN1B-202ENST00000415950 TNNC2P02585 160 aa13.83□□□□□ -0.19
SCN1B-202ENST00000415950 FTLP02792 175 aaPredicted RBP13.83□□□□□ -0.19
SCN1B-202ENST00000415950 CD58P19256 250 aa13.83□□□□□ -0.19
SCN1B-202ENST00000415950 POLGP54098 1239 aaPredicted RBP13.83□□□□□ -0.19
SCN1B-202ENST00000415950 FOXD4Q12950 439 aaPredicted RBP13.83□□□□□ -0.19
SCN1B-202ENST00000415950 SLC12A1Q13621 1099 aa13.83□□□□□ -0.19
SCN1B-202ENST00000415950 TMEM259Q4ZIN3 620 aa13.83□□□□□ -0.19
SCN1B-202ENST00000415950 SEC16BQ96JE7 1060 aa13.83□□□□□ -0.19
SCN1B-202ENST00000415950 SLC4A7Q9Y6M7 1214 aa13.83□□□□□ -0.19
SCN1B-202ENST00000415950 CEP170BQ9Y4F5 1589 aaPredicted RBP13.83□□□□□ -0.19
SCN1B-202ENST00000415950 P4HA1P13674 534 aa13.83□□□□□ -0.2
SCN1B-202ENST00000415950 CHN1P15882 459 aa13.83□□□□□ -0.2
SCN1B-202ENST00000415950 NCF2P19878 526 aaPredicted RBP13.83□□□□□ -0.2
SCN1B-202ENST00000415950 MXI1P50539 228 aa13.83□□□□□ -0.2
SCN1B-202ENST00000415950 GIMAP8Q8ND71 665 aaPredicted RBP13.83□□□□□ -0.2
SCN1B-202ENST00000415950 CDKL2Q92772 493 aa13.83□□□□□ -0.2
SCN1B-202ENST00000415950 MED10Q9BTT4 135 aa13.83□□□□□ -0.2
SCN1B-202ENST00000415950 APOL6Q9BWW8 343 aa13.83□□□□□ -0.2
SCN1B-202ENST00000415950 RFX7Q2KHR2 1363 aa13.83□□□□□ -0.2
SCN1B-202ENST00000415950 RNF225M0QZC1 329 aaPredicted RBP13.83□□□□□ -0.2
SCN1B-202ENST00000415950 RHOBTB3O94955 611 aa13.83□□□□□ -0.2
SCN1B-202ENST00000415950 FAM153BP0C7A2 387 aa13.83□□□□□ -0.2
SCN1B-202ENST00000415950 NBPF9Q3BBW0 867 aa13.83□□□□□ -0.2
SCN1B-202ENST00000415950 FAM153CQ494X1 144 aa13.83□□□□□ -0.2
SCN1B-202ENST00000415950 RNF25Q96BH1 459 aaPredicted RBP13.83□□□□□ -0.2
SCN1B-202ENST00000415950 AGXT2Q9BYV1 514 aa13.83□□□□□ -0.2
SCN1B-202ENST00000415950 SLC40A1Q9NP59 571 aa13.83□□□□□ -0.2
SCN1B-202ENST00000415950 FAM153AQ9UHL3 310 aa13.83□□□□□ -0.2
SCN1B-202ENST00000415950 CEP152O94986 1710 aa13.83□□□□□ -0.2
SCN1B-202ENST00000415950 ITIH6Q6UXX5 1313 aa13.83□□□□□ -0.2
SCN1B-202ENST00000415950 ESYT2A0FGR8 921 aa13.83□□□□□ -0.2
SCN1B-202ENST00000415950 PPIP5K2O43314 1243 aa13.83□□□□□ -0.2
SCN1B-202ENST00000415950 KRT1P04264 644 aa13.83□□□□□ -0.2
SCN1B-202ENST00000415950 LONRF1Q17RB8 773 aa13.83□□□□□ -0.2
SCN1B-202ENST00000415950 TMED8Q6PL24 325 aaPredicted RBP13.83□□□□□ -0.2
SCN1B-202ENST00000415950 PCGF5Q86SE9 256 aa13.83□□□□□ -0.2
SCN1B-202ENST00000415950 OVOS2A0A0J9YW53 1432 aa13.83□□□□□ -0.2
SCN1B-202ENST00000415950 OVOS2Q6IE36 1432 aa13.83□□□□□ -0.2
SCN1B-202ENST00000415950 CLRN2A0PK11 232 aa13.82□□□□□ -0.2
SCN1B-202ENST00000415950 TMED1Q13445 227 aa13.82□□□□□ -0.2
SCN1B-202ENST00000415950 SLC18A3Q16572 532 aa13.82□□□□□ -0.2
SCN1B-202ENST00000415950 TMTC4Q5T4D3 741 aa13.82□□□□□ -0.2
SCN1B-202ENST00000415950 SYCP2LQ5T4T6 812 aa13.82□□□□□ -0.2
SCN1B-202ENST00000415950 WDR93Q6P2C0 686 aa13.82□□□□□ -0.2
SCN1B-202ENST00000415950 ZBTB8OSQ8IWT0 167 aa13.82□□□□□ -0.2
SCN1B-202ENST00000415950 DNAAF3Q8N9W5 541 aa13.82□□□□□ -0.2
SCN1B-202ENST00000415950 MYCBPAPQ8TBZ2 947 aa13.82□□□□□ -0.2
SCN1B-202ENST00000415950 C9orf72Q96LT7 481 aa13.82□□□□□ -0.2
SCN1B-202ENST00000415950 DBNDD1Q9H9R9 158 aa13.82□□□□□ -0.2
SCN1B-202ENST00000415950 PARVGQ9HBI0 331 aa13.82□□□□□ -0.2
SCN1B-202ENST00000415950 FAM217BQ9NTX9 383 aaPredicted RBP13.82□□□□□ -0.2
SCN1B-202ENST00000415950 GINM1Q9NU53 330 aa13.82□□□□□ -0.2
SCN1B-202ENST00000415950 ARHGAP20Q9P2F6 1191 aa13.82□□□□□ -0.2
SCN1B-202ENST00000415950 ANAPC7Q9UJX3 599 aa13.82□□□□□ -0.2
SCN1B-202ENST00000415950 MRPL11Q9Y3B7 192 aaKnown RBP13.82□□□□□ -0.2
SCN1B-202ENST00000415950 COL15A1P39059 1388 aa13.82□□□□□ -0.2
SCN1B-202ENST00000415950 ZBBXA8MT70 800 aa13.82□□□□□ -0.2
SCN1B-202ENST00000415950 ELF1P32519 619 aa13.82□□□□□ -0.2
SCN1B-202ENST00000415950 GALCP54803 685 aa13.82□□□□□ -0.2
SCN1B-202ENST00000415950 EIF3BP55884 814 aaKnown RBP13.82□□□□□ -0.2
SCN1B-202ENST00000415950 OSTNP61366 133 aa13.82□□□□□ -0.2
SCN1B-202ENST00000415950 YWHAEP62258 255 aaKnown RBP13.82□□□□□ -0.2
SCN1B-202ENST00000415950 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.82□□□□□ -0.2
SCN1B-202ENST00000415950 ZC3H18Q86VM9 953 aaKnown RBP13.82□□□□□ -0.2
SCN1B-202ENST00000415950 C7orf31Q8N865 590 aa13.82□□□□□ -0.2
SCN1B-202ENST00000415950 TTC17Q96AE7 1141 aa13.82□□□□□ -0.2
SCN1B-202ENST00000415950 NBPF3Q9H094 633 aa13.82□□□□□ -0.2
SCN1B-202ENST00000415950 PPME1Q9Y570 386 aa13.82□□□□□ -0.2
SCN1B-202ENST00000415950 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.82□□□□□ -0.2
SCN1B-202ENST00000415950 CEMIPQ8WUJ3 1361 aa13.82□□□□□ -0.2
SCN1B-202ENST00000415950 APOEP02649 317 aa13.82□□□□□ -0.2
SCN1B-202ENST00000415950 NMT1P30419 496 aaKnown RBP13.82□□□□□ -0.2
SCN1B-202ENST00000415950 PHEXP78562 749 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms