RNA–Protein interactions for RNA: ENST00000415600.6

PTPRU-203, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 1,590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-203ENST00000415600 C1QTNF1Q9BXJ1 281 aa22.96■■□□□ 1.27
PTPRU-203ENST00000415600 NIFKQ9BYG3 293 aaKnown RBP22.96■■□□□ 1.27
PTPRU-203ENST00000415600 TMEM161AQ9NX61 479 aa22.96■■□□□ 1.27
PTPRU-203ENST00000415600 GRM6O15303 877 aa22.95■■□□□ 1.26
PTPRU-203ENST00000415600 LARGE1O95461 756 aa22.95■■□□□ 1.26
PTPRU-203ENST00000415600 PSMC5P62195 406 aa22.95■■□□□ 1.26
PTPRU-203ENST00000415600 NLRP7Q8WX94 980 aa22.95■■□□□ 1.26
PTPRU-203ENST00000415600 PLAGL2Q9UPG8 496 aa22.95■■□□□ 1.26
PTPRU-203ENST00000415600 LOXHD1Q8IVV2 1947 aa22.95■■□□□ 1.26
PTPRU-203ENST00000415600 MUC3AQ02505 3323 aa22.94■■□□□ 1.26
PTPRU-203ENST00000415600 C9IYK1 514 aa22.94■■□□□ 1.26
PTPRU-203ENST00000415600 TBX3O15119 743 aa22.94■■□□□ 1.26
PTPRU-203ENST00000415600 CCNT1O60563 726 aaKnown RBP22.94■■□□□ 1.26
PTPRU-203ENST00000415600 BAG4O95429 457 aaKnown RBP22.94■■□□□ 1.26
PTPRU-203ENST00000415600 LINC00271P0C7V0 271 aa22.94■■□□□ 1.26
PTPRU-203ENST00000415600 TRIM29Q14134 588 aa22.94■■□□□ 1.26
PTPRU-203ENST00000415600 UGCGQ16739 394 aa22.94■■□□□ 1.26
PTPRU-203ENST00000415600 PTCRAQ6ISU1 281 aaPredicted RBP22.94■■□□□ 1.26
PTPRU-203ENST00000415600 ABI1Q8IZP0 508 aa22.94■■□□□ 1.26
PTPRU-203ENST00000415600 LINC01465Q8N7H1 131 aa22.94■■□□□ 1.26
PTPRU-203ENST00000415600 GJA10Q969M2 543 aa22.94■■□□□ 1.26
PTPRU-203ENST00000415600 CLDND1Q9NY35 253 aa22.94■■□□□ 1.26
PTPRU-203ENST00000415600 DACT1Q9NYF0 836 aa22.94■■□□□ 1.26
PTPRU-203ENST00000415600 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.94■■□□□ 1.26
PTPRU-203ENST00000415600 REV3LO60673 3130 aa22.94■■□□□ 1.26
PTPRU-203ENST00000415600 TBKBP1A7MCY6 615 aa22.93■■□□□ 1.26
PTPRU-203ENST00000415600 MCM4P33991 863 aa22.93■■□□□ 1.26
PTPRU-203ENST00000415600 KRT2P35908 639 aa22.93■■□□□ 1.26
PTPRU-203ENST00000415600 PPP2R5CQ13362 524 aa22.93■■□□□ 1.26
PTPRU-203ENST00000415600 MTERF2Q49AM1 385 aa22.93■■□□□ 1.26
PTPRU-203ENST00000415600 CLEC17AQ6ZS10 378 aa22.93■■□□□ 1.26
PTPRU-203ENST00000415600 PIK3AP1Q6ZUJ8 805 aa22.93■■□□□ 1.26
PTPRU-203ENST00000415600 SLFN12Q8IYM2 578 aa22.93■■□□□ 1.26
PTPRU-203ENST00000415600 GCOM2Q9BZD3 368 aaPredicted RBP22.93■■□□□ 1.26
PTPRU-203ENST00000415600 INO80BQ9C086 356 aaPredicted RBP22.93■■□□□ 1.26
PTPRU-203ENST00000415600 ADAMTS10Q9H324 1103 aa22.93■■□□□ 1.26
PTPRU-203ENST00000415600 ALG13Q9NP73 1137 aaKnown RBP22.93■■□□□ 1.26
PTPRU-203ENST00000415600 PPME1Q9Y570 386 aa22.93■■□□□ 1.26
PTPRU-203ENST00000415600 DDX11L8A8MPP1 907 aa22.93■■□□□ 1.26
PTPRU-203ENST00000415600 MGEA5O60502 916 aa22.93■■□□□ 1.26
PTPRU-203ENST00000415600 DARSP14868 501 aaKnown RBP22.93■■□□□ 1.26
PTPRU-203ENST00000415600 GPC3P51654 580 aa22.93■■□□□ 1.26
PTPRU-203ENST00000415600 UBE3AQ05086 875 aa22.93■■□□□ 1.26
PTPRU-203ENST00000415600 TARBP2Q15633 366 aaKnown RBP22.93■■□□□ 1.26
PTPRU-203ENST00000415600 ME3Q16798 604 aa22.93■■□□□ 1.26
PTPRU-203ENST00000415600 B3GNT9Q6UX72 402 aa22.93■■□□□ 1.26
PTPRU-203ENST00000415600 NEK9Q8TD19 979 aa22.93■■□□□ 1.26
PTPRU-203ENST00000415600 FSD2A1L4K1 749 aa22.92■■□□□ 1.26
PTPRU-203ENST00000415600 QARSP47897 775 aaKnown RBP22.92■■□□□ 1.26
PTPRU-203ENST00000415600 FAM189BP81408 668 aa22.92■■□□□ 1.26
PTPRU-203ENST00000415600 COL19A1Q14993 1142 aa22.92■■□□□ 1.26
PTPRU-203ENST00000415600 KLHL23Q8NBE8 558 aa22.92■■□□□ 1.26
PTPRU-203ENST00000415600 GTF3C6Q969F1 213 aa22.92■■□□□ 1.26
PTPRU-203ENST00000415600 GBP4Q96PP9 640 aa22.92■■□□□ 1.26
PTPRU-203ENST00000415600 KCNMB3Q9NPA1 279 aa22.92■■□□□ 1.26
PTPRU-203ENST00000415600 SLC37A4O43826 429 aa22.91■■□□□ 1.26
PTPRU-203ENST00000415600 SFPQP23246 707 aaKnown RBP eCLIP22.91■■□□□ 1.26
PTPRU-203ENST00000415600 DSC3Q14574 896 aa22.91■■□□□ 1.26
PTPRU-203ENST00000415600 ZNF410Q86VK4 478 aa22.91■■□□□ 1.26
PTPRU-203ENST00000415600 SLC7A3Q8WY07 619 aa22.91■■□□□ 1.26
PTPRU-203ENST00000415600 RSPH1Q8WYR4 309 aa22.91■■□□□ 1.26
PTPRU-203ENST00000415600 TMEM117Q9H0C3 514 aa22.91■■□□□ 1.26
PTPRU-203ENST00000415600 H3BQ06 376 aaPredicted RBP22.9■■□□□ 1.26
PTPRU-203ENST00000415600 ITGB1P05556 798 aa22.9■■□□□ 1.26
PTPRU-203ENST00000415600 P4HBP07237 508 aaKnown RBP22.9■■□□□ 1.26
PTPRU-203ENST00000415600 LAG3P18627 525 aa22.9■■□□□ 1.26
PTPRU-203ENST00000415600 GADD45GIP1Q8TAE8 222 aaPredicted RBP22.9■■□□□ 1.26
PTPRU-203ENST00000415600 CHST12Q9NRB3 414 aa22.9■■□□□ 1.26
PTPRU-203ENST00000415600 MYO7AQ13402 2215 aa22.9■■□□□ 1.26
PTPRU-203ENST00000415600 GRXCR2A6NFK2 248 aa22.89■■□□□ 1.26
PTPRU-203ENST00000415600 GATMP50440 423 aa22.89■■□□□ 1.26
PTPRU-203ENST00000415600 ST3GAL1Q11201 340 aa22.89■■□□□ 1.26
PTPRU-203ENST00000415600 PKP1Q13835 747 aa22.89■■□□□ 1.26
PTPRU-203ENST00000415600 PDE12Q6L8Q7 609 aaKnown RBP22.89■■□□□ 1.26
PTPRU-203ENST00000415600 OTUD6AQ7L8S5 288 aa22.89■■□□□ 1.26
PTPRU-203ENST00000415600 CCDC83Q8IWF9 413 aa22.89■■□□□ 1.26
PTPRU-203ENST00000415600 THNSL1Q8IYQ7 743 aa22.89■■□□□ 1.26
PTPRU-203ENST00000415600 LRRC43Q8N309 656 aa22.89■■□□□ 1.26
PTPRU-203ENST00000415600 SPPL3Q8TCT6 385 aa22.89■■□□□ 1.26
PTPRU-203ENST00000415600 POF1BQ8WVV4 589 aa22.89■■□□□ 1.26
PTPRU-203ENST00000415600 SUCLA2Q9P2R7 463 aaPredicted RBP22.89■■□□□ 1.26
PTPRU-203ENST00000415600 PUF60Q9UHX1 559 aaKnown RBP22.89■■□□□ 1.26
PTPRU-203ENST00000415600 MAFO75444 373 aaPredicted RBP22.89■■□□□ 1.25
PTPRU-203ENST00000415600 SKIP12755 728 aa22.89■■□□□ 1.25
PTPRU-203ENST00000415600 SSTR3P32745 418 aaPredicted RBP22.89■■□□□ 1.25
PTPRU-203ENST00000415600 FAM102BQ5T8I3 360 aa22.89■■□□□ 1.25
PTPRU-203ENST00000415600 NECAB1Q8N987 351 aa22.89■■□□□ 1.25
PTPRU-203ENST00000415600 MICAL1Q8TDZ2 1067 aa22.89■■□□□ 1.25
PTPRU-203ENST00000415600 CYP26B1Q9NR63 512 aa22.89■■□□□ 1.25
PTPRU-203ENST00000415600 VAV3Q9UKW4 847 aa22.89■■□□□ 1.25
PTPRU-203ENST00000415600 ZDHHC9Q9Y397 364 aa22.89■■□□□ 1.25
PTPRU-203ENST00000415600 WDR81Q562E7 1941 aa22.88■■□□□ 1.25
PTPRU-203ENST00000415600 IGKV6-21A0A0C4DH24 114 aa22.88■■□□□ 1.25
PTPRU-203ENST00000415600 CARNS1A5YM72 827 aa22.88■■□□□ 1.25
PTPRU-203ENST00000415600 CSPG5O95196 566 aa22.88■■□□□ 1.25
PTPRU-203ENST00000415600 CTDNEP1O95476 244 aa22.88■■□□□ 1.25
PTPRU-203ENST00000415600 BRD1O95696 1058 aa22.88■■□□□ 1.25
PTPRU-203ENST00000415600 EOMESO95936 686 aa22.88■■□□□ 1.25
PTPRU-203ENST00000415600 PPM1AP35813 382 aa22.88■■□□□ 1.25
PTPRU-203ENST00000415600 POLGP54098 1239 aaPredicted RBP22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms