RNA–Protein interactions for RNA: ENST00000414620.1

ACTB-202, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 561 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-202ENST00000414620 STBD1O95210 358 aa17.48■□□□□ 0.39
ACTB-202ENST00000414620 XBP1P17861 261 aa17.48■□□□□ 0.39
ACTB-202ENST00000414620 LTBRP36941 435 aa17.48■□□□□ 0.39
ACTB-202ENST00000414620 FOSBP53539 338 aa17.48■□□□□ 0.39
ACTB-202ENST00000414620 COL19A1Q14993 1142 aa17.48■□□□□ 0.39
ACTB-202ENST00000414620 TARBP2Q15633 366 aaKnown RBP17.48■□□□□ 0.39
ACTB-202ENST00000414620 PLA2G4FQ68DD2 849 aa17.48■□□□□ 0.39
ACTB-202ENST00000414620 NEK8Q86SG6 692 aa17.48■□□□□ 0.39
ACTB-202ENST00000414620 FAM178BQ8IXR5 827 aa17.48■□□□□ 0.39
ACTB-202ENST00000414620 FAM177A1Q8N128 213 aaPredicted RBP17.48■□□□□ 0.39
ACTB-202ENST00000414620 TMEM161AQ9NX61 479 aa17.48■□□□□ 0.39
ACTB-202ENST00000414620 FAM205CA6NFA0 338 aa17.47■□□□□ 0.39
ACTB-202ENST00000414620 DDX11L8A8MPP1 907 aa17.47■□□□□ 0.39
ACTB-202ENST00000414620 CCNT1O60563 726 aaKnown RBP17.47■□□□□ 0.39
ACTB-202ENST00000414620 ZSCAN20P17040 1043 aaPredicted RBP17.47■□□□□ 0.39
ACTB-202ENST00000414620 EIF4BP23588 611 aaKnown RBP17.47■□□□□ 0.39
ACTB-202ENST00000414620 ANAPC15P60006 121 aa17.47■□□□□ 0.39
ACTB-202ENST00000414620 PUS10Q3MIT2 529 aaKnown RBP17.47■□□□□ 0.39
ACTB-202ENST00000414620 NAALADL2Q58DX5 795 aa17.47■□□□□ 0.39
ACTB-202ENST00000414620 XKR3Q5GH77 459 aa17.47■□□□□ 0.39
ACTB-202ENST00000414620 EARS2Q5JPH6 523 aaKnown RBP17.47■□□□□ 0.39
ACTB-202ENST00000414620 GJD3Q8N144 294 aa17.47■□□□□ 0.39
ACTB-202ENST00000414620 RNF169Q8NCN4 708 aa17.47■□□□□ 0.39
ACTB-202ENST00000414620 NIFKQ9BYG3 293 aaKnown RBP17.47■□□□□ 0.39
ACTB-202ENST00000414620 RNF19AQ9NV58 838 aa17.47■□□□□ 0.39
ACTB-202ENST00000414620 TYW1Q9NV66 732 aaKnown RBP17.47■□□□□ 0.39
ACTB-202ENST00000414620 RNF216Q9NWF9 866 aaPredicted RBP17.47■□□□□ 0.39
ACTB-202ENST00000414620 PCDHB12Q9Y5F1 795 aa17.47■□□□□ 0.39
ACTB-202ENST00000414620 FAM86C2PA6NEL3 165 aa17.46■□□□□ 0.39
ACTB-202ENST00000414620 DARSP14868 501 aaKnown RBP17.46■□□□□ 0.39
ACTB-202ENST00000414620 ME3Q16798 604 aa17.46■□□□□ 0.39
ACTB-202ENST00000414620 CTC1Q2NKJ3 1217 aa17.46■□□□□ 0.39
ACTB-202ENST00000414620 RBM23Q86U06 439 aaKnown RBP17.46■□□□□ 0.39
ACTB-202ENST00000414620 POTEDQ86YR6 584 aa17.46■□□□□ 0.39
ACTB-202ENST00000414620 THNSL1Q8IYQ7 743 aa17.46■□□□□ 0.39
ACTB-202ENST00000414620 COLGALT1Q8NBJ5 622 aa17.46■□□□□ 0.39
ACTB-202ENST00000414620 CEP89Q96ST8 783 aa17.46■□□□□ 0.39
ACTB-202ENST00000414620 C1QTNF1Q9BXJ1 281 aa17.46■□□□□ 0.39
ACTB-202ENST00000414620 CWH43Q9H720 699 aa17.46■□□□□ 0.39
ACTB-202ENST00000414620 ELAC1Q9H777 363 aaKnown RBP17.46■□□□□ 0.39
ACTB-202ENST00000414620 AAASQ9NRG9 546 aa17.46■□□□□ 0.39
ACTB-202ENST00000414620 VAV3Q9UKW4 847 aa17.46■□□□□ 0.39
ACTB-202ENST00000414620 A0A087WZ62 844 aa17.45■□□□□ 0.38
ACTB-202ENST00000414620 NCK2O43639 380 aa17.45■□□□□ 0.38
ACTB-202ENST00000414620 MARCH6O60337 910 aa17.45■□□□□ 0.38
ACTB-202ENST00000414620 NRIP1P48552 1158 aa17.45■□□□□ 0.38
ACTB-202ENST00000414620 NDUFV1P49821 464 aa17.45■□□□□ 0.38
ACTB-202ENST00000414620 PSMC5P62195 406 aa17.45■□□□□ 0.38
ACTB-202ENST00000414620 FAM189BP81408 668 aa17.45■□□□□ 0.38
ACTB-202ENST00000414620 NR5A1Q13285 461 aa17.45■□□□□ 0.38
ACTB-202ENST00000414620 ANKRD1Q15327 319 aa17.45■□□□□ 0.38
ACTB-202ENST00000414620 ECHDC2Q86YB7 292 aa17.45■□□□□ 0.38
ACTB-202ENST00000414620 PPP2R3CQ969Q6 453 aa17.45■□□□□ 0.38
ACTB-202ENST00000414620 FDXACB1Q9BRP7 624 aaPredicted RBP17.45■□□□□ 0.38
ACTB-202ENST00000414620 KCNMB3Q9NPA1 279 aa17.45■□□□□ 0.38
ACTB-202ENST00000414620 BMP2KQ9NSY1 1161 aaPredicted RBP17.45■□□□□ 0.38
ACTB-202ENST00000414620 MBTPS2O43462 519 aa17.44■□□□□ 0.38
ACTB-202ENST00000414620 FGF18O76093 207 aa17.44■□□□□ 0.38
ACTB-202ENST00000414620 FDPSP14324 419 aaKnown RBP17.44■□□□□ 0.38
ACTB-202ENST00000414620 KRT2P35908 639 aa17.44■□□□□ 0.38
ACTB-202ENST00000414620 PBX3P40426 434 aa17.44■□□□□ 0.38
ACTB-202ENST00000414620 NPEPPSP55786 919 aa17.44■□□□□ 0.38
ACTB-202ENST00000414620 PPP2R5CQ13362 524 aa17.44■□□□□ 0.38
ACTB-202ENST00000414620 NCAPH2Q6IBW4 605 aa17.44■□□□□ 0.38
ACTB-202ENST00000414620 ANO5Q75V66 913 aa17.44■□□□□ 0.38
ACTB-202ENST00000414620 RHPN2Q8IUC4 686 aa17.44■□□□□ 0.38
ACTB-202ENST00000414620 KSR1Q8IVT5 923 aa17.44■□□□□ 0.38
ACTB-202ENST00000414620 ABI1Q8IZP0 508 aa17.44■□□□□ 0.38
ACTB-202ENST00000414620 MICAL1Q8TDZ2 1067 aa17.44■□□□□ 0.38
ACTB-202ENST00000414620 WASF1Q92558 559 aa17.44■□□□□ 0.38
ACTB-202ENST00000414620 GTF3C6Q969F1 213 aa17.44■□□□□ 0.38
ACTB-202ENST00000414620 NLRP4Q96MN2 994 aa17.44■□□□□ 0.38
ACTB-202ENST00000414620 CASD1Q96PB1 797 aa17.44■□□□□ 0.38
ACTB-202ENST00000414620 GCOM2Q9BZD3 368 aaPredicted RBP17.44■□□□□ 0.38
ACTB-202ENST00000414620 TMEM117Q9H0C3 514 aa17.44■□□□□ 0.38
ACTB-202ENST00000414620 SUCLA2Q9P2R7 463 aaPredicted RBP17.44■□□□□ 0.38
ACTB-202ENST00000414620 WRAP73Q9P2S5 460 aaPredicted RBP17.44■□□□□ 0.38
ACTB-202ENST00000414620 FAM50BQ9Y247 325 aa17.44■□□□□ 0.38
ACTB-202ENST00000414620 IGKV6-21A0A0C4DH24 114 aa17.43■□□□□ 0.38
ACTB-202ENST00000414620 JAK2O60674 1132 aa17.43■□□□□ 0.38
ACTB-202ENST00000414620 GCFC2P16383 781 aaKnown RBP17.43■□□□□ 0.38
ACTB-202ENST00000414620 LAG3P18627 525 aa17.43■□□□□ 0.38
ACTB-202ENST00000414620 QARSP47897 775 aaKnown RBP17.43■□□□□ 0.38
ACTB-202ENST00000414620 DNM2P50570 870 aa17.43■□□□□ 0.38
ACTB-202ENST00000414620 ZP2Q05996 745 aa17.43■□□□□ 0.38
ACTB-202ENST00000414620 ADAM15Q13444 863 aa17.43■□□□□ 0.38
ACTB-202ENST00000414620 CLLU1OSQ5K130 101 aa17.43■□□□□ 0.38
ACTB-202ENST00000414620 PPP4R3AQ6IN85 833 aa17.43■□□□□ 0.38
ACTB-202ENST00000414620 LRRC55Q6ZSA7 311 aa17.43■□□□□ 0.38
ACTB-202ENST00000414620 FAM43BQ6ZT52 329 aaPredicted RBP17.43■□□□□ 0.38
ACTB-202ENST00000414620 ZNF710Q8N1W2 664 aa17.43■□□□□ 0.38
ACTB-202ENST00000414620 LRRC43Q8N309 656 aa17.43■□□□□ 0.38
ACTB-202ENST00000414620 ZNF579Q8NAF0 562 aaKnown RBP17.43■□□□□ 0.38
ACTB-202ENST00000414620 HELQQ8TDG4 1101 aa17.43■□□□□ 0.38
ACTB-202ENST00000414620 HAS1Q92839 578 aa17.43■□□□□ 0.38
ACTB-202ENST00000414620 FAM20AQ96MK3 541 aa17.43■□□□□ 0.38
ACTB-202ENST00000414620 LRFN3Q9BTN0 628 aa17.43■□□□□ 0.38
ACTB-202ENST00000414620 TLR9Q9NR96 1032 aa17.43■□□□□ 0.38
ACTB-202ENST00000414620 CD207Q9UJ71 328 aa17.43■□□□□ 0.38
ACTB-202ENST00000414620 BARX2Q9UMQ3 279 aaPredicted RBP17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms