RNA–Protein interactions for RNA: ENST00000414040.6

TNFRSF25-206, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 1 (best)

Gene TNFRSF25, Length 1,198 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-206ENST00000414040 C1orf112Q9NSG2 853 aa25.54■■□□□ 1.68
TNFRSF25-206ENST00000414040 PCDHB7Q9Y5E2 793 aa25.54■■□□□ 1.68
TNFRSF25-206ENST00000414040 IGKV6-21A0A0C4DH24 114 aa25.53■■□□□ 1.68
TNFRSF25-206ENST00000414040 BTBD18B2RXH4 712 aa25.53■■□□□ 1.68
TNFRSF25-206ENST00000414040 MMP1P03956 469 aa25.53■■□□□ 1.68
TNFRSF25-206ENST00000414040 ITGB1P05556 798 aa25.53■■□□□ 1.68
TNFRSF25-206ENST00000414040 DARSP14868 501 aaKnown RBP25.53■■□□□ 1.68
TNFRSF25-206ENST00000414040 EIF4BP23588 611 aaKnown RBP25.53■■□□□ 1.68
TNFRSF25-206ENST00000414040 NPEPPSP55786 919 aa25.53■■□□□ 1.68
TNFRSF25-206ENST00000414040 PSMC5P62195 406 aa25.53■■□□□ 1.68
TNFRSF25-206ENST00000414040 SPIRE1Q08AE8 756 aa25.53■■□□□ 1.68
TNFRSF25-206ENST00000414040 C8orf34Q49A92 452 aa25.53■■□□□ 1.68
TNFRSF25-206ENST00000414040 RNF19AQ9NV58 838 aa25.53■■□□□ 1.68
TNFRSF25-206ENST00000414040 PLAGL2Q9UPG8 496 aa25.53■■□□□ 1.68
TNFRSF25-206ENST00000414040 TBKBP1A7MCY6 615 aa25.52■■□□□ 1.68
TNFRSF25-206ENST00000414040 FAM189BP81408 668 aa25.52■■□□□ 1.68
TNFRSF25-206ENST00000414040 ODR4Q5SWX8 454 aa25.52■■□□□ 1.68
TNFRSF25-206ENST00000414040 NCAPH2Q6IBW4 605 aa25.52■■□□□ 1.68
TNFRSF25-206ENST00000414040 DIS3L2Q8IYB7 885 aaKnown RBP25.52■■□□□ 1.68
TNFRSF25-206ENST00000414040 KLHL23Q8NBE8 558 aa25.52■■□□□ 1.68
TNFRSF25-206ENST00000414040 GADD45GIP1Q8TAE8 222 aaPredicted RBP25.52■■□□□ 1.68
TNFRSF25-206ENST00000414040 NLRP7Q8WX94 980 aa25.52■■□□□ 1.68
TNFRSF25-206ENST00000414040 SCLT1Q96NL6 688 aa25.52■■□□□ 1.68
TNFRSF25-206ENST00000414040 KIF2CQ99661 725 aa25.52■■□□□ 1.68
TNFRSF25-206ENST00000414040 RGL1Q9NZL6 768 aa25.52■■□□□ 1.68
TNFRSF25-206ENST00000414040 H3BQ06 376 aaPredicted RBP25.51■■□□□ 1.67
TNFRSF25-206ENST00000414040 GTF2F1P35269 517 aaKnown RBP eCLIP25.51■■□□□ 1.67
TNFRSF25-206ENST00000414040 QARSP47897 775 aaKnown RBP25.51■■□□□ 1.67
TNFRSF25-206ENST00000414040 GUCY1B3Q02153 619 aa25.51■■□□□ 1.67
TNFRSF25-206ENST00000414040 KSR1Q8IVT5 923 aa25.51■■□□□ 1.67
TNFRSF25-206ENST00000414040 CCDC83Q8IWF9 413 aa25.51■■□□□ 1.67
TNFRSF25-206ENST00000414040 PLVAPQ9BX97 442 aa25.51■■□□□ 1.67
TNFRSF25-206ENST00000414040 BMP2KQ9NSY1 1161 aaPredicted RBP25.51■■□□□ 1.67
TNFRSF25-206ENST00000414040 TMEM161AQ9NX61 479 aa25.51■■□□□ 1.67
TNFRSF25-206ENST00000414040 A0A087WZ62 844 aa25.5■■□□□ 1.67
TNFRSF25-206ENST00000414040 TBX3O15119 743 aa25.5■■□□□ 1.67
TNFRSF25-206ENST00000414040 IRS1P35568 1242 aa25.5■■□□□ 1.67
TNFRSF25-206ENST00000414040 HYAL1Q12794 435 aa25.5■■□□□ 1.67
TNFRSF25-206ENST00000414040 COL19A1Q14993 1142 aa25.5■■□□□ 1.67
TNFRSF25-206ENST00000414040 SPPL3Q8TCT6 385 aa25.5■■□□□ 1.67
TNFRSF25-206ENST00000414040 P2RX5Q93086 422 aa25.5■■□□□ 1.67
TNFRSF25-206ENST00000414040 DYDC2Q96IM9 177 aa25.5■■□□□ 1.67
TNFRSF25-206ENST00000414040 FDXACB1Q9BRP7 624 aaPredicted RBP25.5■■□□□ 1.67
TNFRSF25-206ENST00000414040 LMAN2LQ9H0V9 348 aa25.5■■□□□ 1.67
TNFRSF25-206ENST00000414040 PCDHGC5Q9Y5F6 944 aa25.5■■□□□ 1.67
TNFRSF25-206ENST00000414040 ZBTB39O15060 712 aa25.49■■□□□ 1.67
TNFRSF25-206ENST00000414040 MAFO75444 373 aaPredicted RBP25.49■■□□□ 1.67
TNFRSF25-206ENST00000414040 CYP4A11Q02928 519 aa25.49■■□□□ 1.67
TNFRSF25-206ENST00000414040 LEXMQ3ZCV2 418 aa25.49■■□□□ 1.67
TNFRSF25-206ENST00000414040 EP400NLQ6ZTU2 488 aa25.49■■□□□ 1.67
TNFRSF25-206ENST00000414040 NAP1L4Q99733 375 aaKnown RBP25.49■■□□□ 1.67
TNFRSF25-206ENST00000414040 LXNQ9BS40 222 aa25.49■■□□□ 1.67
TNFRSF25-206ENST00000414040 ATP6V0A4Q9HBG4 840 aa25.49■■□□□ 1.67
TNFRSF25-206ENST00000414040 BRMS1Q9HCU9 246 aa25.49■■□□□ 1.67
TNFRSF25-206ENST00000414040 CYP26B1Q9NR63 512 aa25.49■■□□□ 1.67
TNFRSF25-206ENST00000414040 SUCLA2Q9P2R7 463 aaPredicted RBP25.49■■□□□ 1.67
TNFRSF25-206ENST00000414040 MARCH6O60337 910 aa25.48■■□□□ 1.67
TNFRSF25-206ENST00000414040 P4HBP07237 508 aaKnown RBP25.48■■□□□ 1.67
TNFRSF25-206ENST00000414040 IL9P15248 144 aa25.48■■□□□ 1.67
TNFRSF25-206ENST00000414040 CTTNQ14247 550 aaKnown RBP25.48■■□□□ 1.67
TNFRSF25-206ENST00000414040 EPHA7Q15375 998 aa25.48■■□□□ 1.67
TNFRSF25-206ENST00000414040 ADGRD2Q7Z7M1 963 aa25.48■■□□□ 1.67
TNFRSF25-206ENST00000414040 ECHDC2Q86YB7 292 aa25.48■■□□□ 1.67
TNFRSF25-206ENST00000414040 RHPN2Q8IUC4 686 aa25.48■■□□□ 1.67
TNFRSF25-206ENST00000414040 NEK9Q8TD19 979 aa25.48■■□□□ 1.67
TNFRSF25-206ENST00000414040 PABPC5Q96DU9 382 aaKnown RBP25.48■■□□□ 1.67
TNFRSF25-206ENST00000414040 CWH43Q9H720 699 aa25.48■■□□□ 1.67
TNFRSF25-206ENST00000414040 CD320Q9NPF0 282 aa25.48■■□□□ 1.67
TNFRSF25-206ENST00000414040 TYW1Q9NV66 732 aaKnown RBP25.48■■□□□ 1.67
TNFRSF25-206ENST00000414040 CLDND1Q9NY35 253 aa25.48■■□□□ 1.67
TNFRSF25-206ENST00000414040 LIMCH1Q9UPQ0 1083 aa25.48■■□□□ 1.67
TNFRSF25-206ENST00000414040 LINC01565O15544 149 aa25.47■■□□□ 1.67
TNFRSF25-206ENST00000414040 ATF7P17544 494 aaPredicted RBP25.47■■□□□ 1.67
TNFRSF25-206ENST00000414040 LTBRP36941 435 aa25.47■■□□□ 1.67
TNFRSF25-206ENST00000414040 DLX2Q07687 328 aaPredicted RBP25.47■■□□□ 1.67
TNFRSF25-206ENST00000414040 SPOUT1Q5T280 376 aaKnown RBP25.47■■□□□ 1.67
TNFRSF25-206ENST00000414040 LRRC55Q6ZSA7 311 aa25.47■■□□□ 1.67
TNFRSF25-206ENST00000414040 POF1BQ8WVV4 589 aa25.47■■□□□ 1.67
TNFRSF25-206ENST00000414040 NLRP4Q96MN2 994 aa25.47■■□□□ 1.67
TNFRSF25-206ENST00000414040 ELAC1Q9H777 363 aaKnown RBP25.47■■□□□ 1.67
TNFRSF25-206ENST00000414040 EIF5BO60841 1220 aaKnown RBP25.46■■□□□ 1.67
TNFRSF25-206ENST00000414040 CLLU1OSQ5K130 101 aa25.46■■□□□ 1.67
TNFRSF25-206ENST00000414040 RNF169Q8NCN4 708 aa25.46■■□□□ 1.67
TNFRSF25-206ENST00000414040 KHSRPQ92945 711 aaKnown RBP eCLIP25.46■■□□□ 1.67
TNFRSF25-206ENST00000414040 CEP170P1Q96L14 293 aa25.46■■□□□ 1.67
TNFRSF25-206ENST00000414040 CASD1Q96PB1 797 aa25.46■■□□□ 1.67
TNFRSF25-206ENST00000414040 GCOM2Q9BZD3 368 aaPredicted RBP25.46■■□□□ 1.67
TNFRSF25-206ENST00000414040 ZSCAN20P17040 1043 aaPredicted RBP25.45■■□□□ 1.66
TNFRSF25-206ENST00000414040 TRIM29Q14134 588 aa25.45■■□□□ 1.66
TNFRSF25-206ENST00000414040 CALCRLQ16602 461 aa25.45■■□□□ 1.66
TNFRSF25-206ENST00000414040 PTCRAQ6ISU1 281 aaPredicted RBP25.45■■□□□ 1.66
TNFRSF25-206ENST00000414040 FAM43BQ6ZT52 329 aaPredicted RBP25.45■■□□□ 1.66
TNFRSF25-206ENST00000414040 C4orf19Q8IY42 314 aa25.45■■□□□ 1.66
TNFRSF25-206ENST00000414040 SLFN12Q8IYM2 578 aa25.45■■□□□ 1.66
TNFRSF25-206ENST00000414040 ZNF710Q8N1W2 664 aa25.45■■□□□ 1.66
TNFRSF25-206ENST00000414040 COLGALT1Q8NBJ5 622 aa25.45■■□□□ 1.66
TNFRSF25-206ENST00000414040 TMEM143Q96AN5 459 aa25.45■■□□□ 1.66
TNFRSF25-206ENST00000414040 TMEM60Q9H2L4 133 aa25.45■■□□□ 1.66
TNFRSF25-206ENST00000414040 IGFLR1Q9H665 355 aa25.45■■□□□ 1.66
TNFRSF25-206ENST00000414040 DHX33Q9H6R0 707 aaKnown RBP25.45■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms