RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 MED4Q9NPJ6 270 aa10.27□□□□□ -0.77
SNHG3-201ENST00000413987 ATP8A2Q9NTI2 1148 aa10.27□□□□□ -0.77
SNHG3-201ENST00000413987 KLHL11Q9NVR0 708 aa10.27□□□□□ -0.77
SNHG3-201ENST00000413987 RTEL1Q9NZ71 1219 aa10.27□□□□□ -0.77
SNHG3-201ENST00000413987 CEP83Q9Y592 693 aa10.27□□□□□ -0.77
SNHG3-201ENST00000413987 ZMYM6O95789 1325 aa10.27□□□□□ -0.77
SNHG3-201ENST00000413987 EVI5O60447 810 aa10.26□□□□□ -0.77
SNHG3-201ENST00000413987 RANBP6O60518 1105 aaKnown RBP10.26□□□□□ -0.77
SNHG3-201ENST00000413987 PFKFB2O60825 505 aa10.26□□□□□ -0.77
SNHG3-201ENST00000413987 SERPINC1P01008 464 aa10.26□□□□□ -0.77
SNHG3-201ENST00000413987 POLR3DP05423 398 aaPredicted RBP10.26□□□□□ -0.77
SNHG3-201ENST00000413987 TRDNQ13061 729 aa10.26□□□□□ -0.77
SNHG3-201ENST00000413987 BEND6Q5SZJ8 279 aaPredicted RBP10.26□□□□□ -0.77
SNHG3-201ENST00000413987 BTN2A1Q7KYR7 527 aa10.26□□□□□ -0.77
SNHG3-201ENST00000413987 CDAN1Q8IWY9 1227 aa10.26□□□□□ -0.77
SNHG3-201ENST00000413987 RIN3Q8TB24 985 aa10.26□□□□□ -0.77
SNHG3-201ENST00000413987 MGARPQ8TDB4 240 aa10.26□□□□□ -0.77
SNHG3-201ENST00000413987 ZDHHC15Q96MV8 337 aa10.26□□□□□ -0.77
SNHG3-201ENST00000413987 TBC1D22BQ9NU19 505 aa10.26□□□□□ -0.77
SNHG3-201ENST00000413987 TIAM2Q8IVF5 1701 aa10.26□□□□□ -0.77
SNHG3-201ENST00000413987 ASTN2O75129 1339 aaPredicted RBP10.26□□□□□ -0.77
SNHG3-201ENST00000413987 PSME4Q14997 1843 aa10.26□□□□□ -0.77
SNHG3-201ENST00000413987 LAMB1P07942 1786 aa10.26□□□□□ -0.77
SNHG3-201ENST00000413987 PMM2O15305 246 aa10.26□□□□□ -0.77
SNHG3-201ENST00000413987 SMARCA1P28370 1054 aa10.26□□□□□ -0.77
SNHG3-201ENST00000413987 EIF2B5Q13144 721 aaKnown RBP10.26□□□□□ -0.77
SNHG3-201ENST00000413987 TRIM14Q14142 442 aa10.26□□□□□ -0.77
SNHG3-201ENST00000413987 SHROOM1Q2M3G4 852 aaPredicted RBP10.26□□□□□ -0.77
SNHG3-201ENST00000413987 ATP13A4Q4VNC1 1196 aa10.26□□□□□ -0.77
SNHG3-201ENST00000413987 C12orf60Q5U649 245 aa10.26□□□□□ -0.77
SNHG3-201ENST00000413987 CIAPIN1Q6FI81 312 aa10.26□□□□□ -0.77
SNHG3-201ENST00000413987 SPOCD1Q6ZMY3 1216 aa10.26□□□□□ -0.77
SNHG3-201ENST00000413987 MSANTD4Q8NCY6 345 aa10.26□□□□□ -0.77
SNHG3-201ENST00000413987 CPLX3Q8WVH0 158 aa10.26□□□□□ -0.77
SNHG3-201ENST00000413987 JAKMIP2Q96AA8 810 aa10.26□□□□□ -0.77
SNHG3-201ENST00000413987 EPC1Q9H2F5 836 aa10.26□□□□□ -0.77
SNHG3-201ENST00000413987 PIH1D1Q9NWS0 290 aaKnown RBP10.26□□□□□ -0.77
SNHG3-201ENST00000413987 PCDHA7Q9UN72 937 aa10.26□□□□□ -0.77
SNHG3-201ENST00000413987 ITIH6Q6UXX5 1313 aa10.26□□□□□ -0.77
SNHG3-201ENST00000413987 TCP10L2B9ZVM9 353 aa10.25□□□□□ -0.77
SNHG3-201ENST00000413987 SMAD7O15105 426 aaKnown RBP10.25□□□□□ -0.77
SNHG3-201ENST00000413987 FANCGO15287 622 aa10.25□□□□□ -0.77
SNHG3-201ENST00000413987 KIAA0754O94854 1291 aa10.25□□□□□ -0.77
SNHG3-201ENST00000413987 YEATS4O95619 227 aa10.25□□□□□ -0.77
SNHG3-201ENST00000413987 EYA4O95677 639 aa10.25□□□□□ -0.77
SNHG3-201ENST00000413987 PRPHP41219 470 aa10.25□□□□□ -0.77
SNHG3-201ENST00000413987 SOX9P48436 509 aa10.25□□□□□ -0.77
SNHG3-201ENST00000413987 PRSS12P56730 875 aa10.25□□□□□ -0.77
SNHG3-201ENST00000413987 GSCP56915 257 aaPredicted RBP10.25□□□□□ -0.77
SNHG3-201ENST00000413987 MTMR2Q13614 643 aa10.25□□□□□ -0.77
SNHG3-201ENST00000413987 SEPT7Q16181 437 aaKnown RBP10.25□□□□□ -0.77
SNHG3-201ENST00000413987 GALNT17Q6IS24 598 aa10.25□□□□□ -0.77
SNHG3-201ENST00000413987 HHIPL2Q6UWX4 724 aa10.25□□□□□ -0.77
SNHG3-201ENST00000413987 SAMD7Q7Z3H4 446 aa10.25□□□□□ -0.77
SNHG3-201ENST00000413987 SULF1Q8IWU6 871 aa10.25□□□□□ -0.77
SNHG3-201ENST00000413987 RSAD2Q8WXG1 361 aa10.25□□□□□ -0.77
SNHG3-201ENST00000413987 KIFC2Q96AC6 838 aa10.25□□□□□ -0.77
SNHG3-201ENST00000413987 TNIP3Q96KP6 325 aa10.25□□□□□ -0.77
SNHG3-201ENST00000413987 GSDMAQ96QA5 445 aa10.25□□□□□ -0.77
SNHG3-201ENST00000413987 BAG1Q99933 345 aaPredicted RBP10.25□□□□□ -0.77
SNHG3-201ENST00000413987 RPAP3Q9H6T3 665 aaPredicted RBP10.25□□□□□ -0.77
SNHG3-201ENST00000413987 CYP4F11Q9HBI6 524 aa10.25□□□□□ -0.77
SNHG3-201ENST00000413987 SLC5A4Q9NY91 659 aa10.25□□□□□ -0.77
SNHG3-201ENST00000413987 ARPP21Q9UBL0 812 aaPredicted RBP10.25□□□□□ -0.77
SNHG3-201ENST00000413987 FAM198AQ9UFP1 575 aa10.25□□□□□ -0.77
SNHG3-201ENST00000413987 L1RE1Q9UN81 338 aa10.25□□□□□ -0.77
SNHG3-201ENST00000413987 DDX60LQ5H9U9 1706 aaKnown RBP10.25□□□□□ -0.77
SNHG3-201ENST00000413987 RTCAO00442 366 aaKnown RBP10.25□□□□□ -0.77
SNHG3-201ENST00000413987 IL33O95760 270 aa10.25□□□□□ -0.77
SNHG3-201ENST00000413987 CCDC172P0C7W6 258 aa10.25□□□□□ -0.77
SNHG3-201ENST00000413987 GMPSP49915 693 aaPredicted RBP10.25□□□□□ -0.77
SNHG3-201ENST00000413987 GJA9P57773 515 aa10.25□□□□□ -0.77
SNHG3-201ENST00000413987 MYL5Q02045 173 aa10.25□□□□□ -0.77
SNHG3-201ENST00000413987 SPATA1Q5VX52 437 aa10.25□□□□□ -0.77
SNHG3-201ENST00000413987 NECAB2Q7Z6G3 386 aa10.25□□□□□ -0.77
SNHG3-201ENST00000413987 TADA2BQ86TJ2 420 aa10.25□□□□□ -0.77
SNHG3-201ENST00000413987 CLEC10AQ8IUN9 316 aa10.25□□□□□ -0.77
SNHG3-201ENST00000413987 ELOA2Q8IYF1 753 aaPredicted RBP10.25□□□□□ -0.77
SNHG3-201ENST00000413987 PHTF2Q8N3S3 785 aa10.25□□□□□ -0.77
SNHG3-201ENST00000413987 LILRB1Q8NHL6 650 aaPredicted RBP10.25□□□□□ -0.77
SNHG3-201ENST00000413987 NUDT16L1Q9BRJ7 211 aaKnown RBP10.25□□□□□ -0.77
SNHG3-201ENST00000413987 VEZTQ9HBM0 779 aa10.25□□□□□ -0.77
SNHG3-201ENST00000413987 PCSK1NQ9UHG2 260 aa10.25□□□□□ -0.77
SNHG3-201ENST00000413987 MAPK8IP1Q9UQF2 711 aa10.25□□□□□ -0.77
SNHG3-201ENST00000413987 PCNTO95613 3336 aa10.24□□□□□ -0.77
SNHG3-201ENST00000413987 MYH1P12882 1939 aa10.24□□□□□ -0.77
SNHG3-201ENST00000413987 A0A087WWV3 80 aa10.24□□□□□ -0.77
SNHG3-201ENST00000413987 KLF18A0A0U1RQI7 1052 aa10.24□□□□□ -0.77
SNHG3-201ENST00000413987 DDTLA6NHG4 134 aaPredicted RBP10.24□□□□□ -0.77
SNHG3-201ENST00000413987 BHMG1C9JSJ3 638 aaPredicted RBP10.24□□□□□ -0.77
SNHG3-201ENST00000413987 STXBP3O00186 592 aa10.24□□□□□ -0.77
SNHG3-201ENST00000413987 CUTAO60888 179 aa10.24□□□□□ -0.77
SNHG3-201ENST00000413987 EIF1AXP47813 144 aaKnown RBP10.24□□□□□ -0.77
SNHG3-201ENST00000413987 NDUFA8P51970 172 aa10.24□□□□□ -0.77
SNHG3-201ENST00000413987 MRPS35P82673 323 aaKnown RBP10.24□□□□□ -0.77
SNHG3-201ENST00000413987 SCRN1Q12765 414 aa10.24□□□□□ -0.77
SNHG3-201ENST00000413987 MRPL28Q13084 256 aaKnown RBP10.24□□□□□ -0.77
SNHG3-201ENST00000413987 SLC9A5Q14940 896 aa10.24□□□□□ -0.77
SNHG3-201ENST00000413987 LRRC31Q6UY01 552 aa10.24□□□□□ -0.77
SNHG3-201ENST00000413987 SH3BP5LQ7L8J4 393 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms