RNA–Protein interactions for RNA: ENST00000413582.6

RFFL-203, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene RFFL, Length 1,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-203ENST00000413582 TYW1BQ6NUM6 668 aa10.87□□□□□ -0.67
RFFL-203ENST00000413582 PDXDC2PQ6P474 469 aa10.87□□□□□ -0.67
RFFL-203ENST00000413582 ECHDC2Q86YB7 292 aa10.87□□□□□ -0.67
RFFL-203ENST00000413582 CCDC105Q8IYK2 499 aa10.87□□□□□ -0.67
RFFL-203ENST00000413582 ABI1Q8IZP0 508 aa10.87□□□□□ -0.67
RFFL-203ENST00000413582 C12orf76Q8N812 135 aaPredicted RBP10.87□□□□□ -0.67
RFFL-203ENST00000413582 FEZF2Q8TBJ5 459 aa10.87□□□□□ -0.67
RFFL-203ENST00000413582 MTA3Q9BTC8 594 aa10.87□□□□□ -0.67
RFFL-203ENST00000413582 ANO3Q9BYT9 981 aa10.87□□□□□ -0.67
RFFL-203ENST00000413582 ZNF302Q9NR11 478 aa10.87□□□□□ -0.67
RFFL-203ENST00000413582 DZANK1Q9NVP4 752 aa10.87□□□□□ -0.67
RFFL-203ENST00000413582 LIMD1Q9UGP4 676 aa10.87□□□□□ -0.67
RFFL-203ENST00000413582 USTQ9Y2C2 406 aa10.87□□□□□ -0.67
RFFL-203ENST00000413582 DOCK8Q8NF50 2099 aa10.86□□□□□ -0.67
RFFL-203ENST00000413582 FANCMQ8IYD8 2048 aa10.86□□□□□ -0.67
RFFL-203ENST00000413582 PRC1O43663 620 aa10.86□□□□□ -0.67
RFFL-203ENST00000413582 EOMESO95936 686 aa10.86□□□□□ -0.67
RFFL-203ENST00000413582 NPR3P17342 541 aa10.86□□□□□ -0.67
RFFL-203ENST00000413582 AOC1P19801 751 aa10.86□□□□□ -0.67
RFFL-203ENST00000413582 CHMLP26374 656 aa10.86□□□□□ -0.67
RFFL-203ENST00000413582 SREBF1P36956 1147 aa10.86□□□□□ -0.67
RFFL-203ENST00000413582 TTC22Q5TAA0 569 aa10.86□□□□□ -0.67
RFFL-203ENST00000413582 KANK3Q6NY19 840 aa10.86□□□□□ -0.67
RFFL-203ENST00000413582 CASC1Q6TDU7 716 aa10.86□□□□□ -0.67
RFFL-203ENST00000413582 NFXL1Q6ZNB6 911 aa10.86□□□□□ -0.67
RFFL-203ENST00000413582 ZNF598Q86UK7 904 aaKnown RBP10.86□□□□□ -0.67
RFFL-203ENST00000413582 TMEM173Q86WV6 379 aaPredicted RBP10.86□□□□□ -0.67
RFFL-203ENST00000413582 RAB11FIP4Q86YS3 637 aa10.86□□□□□ -0.67
RFFL-203ENST00000413582 PLCD3Q8N3E9 789 aa10.86□□□□□ -0.67
RFFL-203ENST00000413582 CCDC82Q8N4S0 544 aa10.86□□□□□ -0.67
RFFL-203ENST00000413582 LINC01465Q8N7H1 131 aa10.86□□□□□ -0.67
RFFL-203ENST00000413582 FLCNQ8NFG4 579 aa10.86□□□□□ -0.67
RFFL-203ENST00000413582 RUFY2Q8WXA3 655 aa10.86□□□□□ -0.67
RFFL-203ENST00000413582 ZBP1Q9H171 429 aa10.86□□□□□ -0.67
RFFL-203ENST00000413582 ADAMTS10Q9H324 1103 aa10.86□□□□□ -0.67
RFFL-203ENST00000413582 DBR1Q9UK59 544 aaKnown RBP10.86□□□□□ -0.67
RFFL-203ENST00000413582 CNTNAP5Q8WYK1 1306 aa10.85□□□□□ -0.67
RFFL-203ENST00000413582 DNAH14Q0VDD8 3507 aa10.85□□□□□ -0.67
RFFL-203ENST00000413582 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.85□□□□□ -0.67
RFFL-203ENST00000413582 CCDC69A6NI79 296 aa10.85□□□□□ -0.67
RFFL-203ENST00000413582 DHX15O43143 795 aaKnown RBP10.85□□□□□ -0.67
RFFL-203ENST00000413582 SGSM2O43147 1006 aa10.85□□□□□ -0.67
RFFL-203ENST00000413582 PI15O43692 258 aa10.85□□□□□ -0.67
RFFL-203ENST00000413582 CALM1P0DP23 149 aa10.85□□□□□ -0.67
RFFL-203ENST00000413582 CALM2P0DP24 149 aa10.85□□□□□ -0.67
RFFL-203ENST00000413582 CALM3P0DP25 149 aa10.85□□□□□ -0.67
RFFL-203ENST00000413582 PRKCSHP14314 528 aaPredicted RBP10.85□□□□□ -0.67
RFFL-203ENST00000413582 EPCAMP16422 314 aa10.85□□□□□ -0.67
RFFL-203ENST00000413582 METAP2P50579 478 aaKnown RBP eCLIP10.85□□□□□ -0.67
RFFL-203ENST00000413582 CLCN3P51790 818 aa10.85□□□□□ -0.67
RFFL-203ENST00000413582 ANGPT1Q15389 498 aa10.85□□□□□ -0.67
RFFL-203ENST00000413582 ATAT1Q5SQI0 421 aa10.85□□□□□ -0.67
RFFL-203ENST00000413582 SWSAP1Q6NVH7 229 aa10.85□□□□□ -0.67
RFFL-203ENST00000413582 PPP1R18Q6NYC8 613 aa10.85□□□□□ -0.67
RFFL-203ENST00000413582 MIS18BP1Q6P0N0 1132 aa10.85□□□□□ -0.67
RFFL-203ENST00000413582 NIPA1Q7RTP0 329 aa10.85□□□□□ -0.67
RFFL-203ENST00000413582 TEX2Q8IWB9 1127 aa10.85□□□□□ -0.67
RFFL-203ENST00000413582 METTL13Q8N6R0 699 aa10.85□□□□□ -0.67
RFFL-203ENST00000413582 RNF169Q8NCN4 708 aa10.85□□□□□ -0.67
RFFL-203ENST00000413582 HELQQ8TDG4 1101 aa10.85□□□□□ -0.67
RFFL-203ENST00000413582 AUTS2Q8WXX7 1259 aa10.85□□□□□ -0.67
RFFL-203ENST00000413582 BBXQ8WY36 941 aaPredicted RBP10.85□□□□□ -0.67
RFFL-203ENST00000413582 TMEM87BQ96K49 555 aa10.85□□□□□ -0.67
RFFL-203ENST00000413582 MRPL9Q9BYD2 267 aaKnown RBP10.85□□□□□ -0.67
RFFL-203ENST00000413582 RIC8AQ9NPQ8 531 aa10.85□□□□□ -0.67
RFFL-203ENST00000413582 CYP26B1Q9NR63 512 aa10.85□□□□□ -0.67
RFFL-203ENST00000413582 DUSP12Q9UNI6 340 aa10.85□□□□□ -0.67
RFFL-203ENST00000413582 MAFBQ9Y5Q3 323 aaPredicted RBP10.85□□□□□ -0.67
RFFL-203ENST00000413582 RBM8AQ9Y5S9 174 aaKnown RBP10.85□□□□□ -0.67
RFFL-203ENST00000413582 IRAK3Q9Y616 596 aa10.85□□□□□ -0.67
RFFL-203ENST00000413582 FRYLO94915 3013 aa10.84□□□□□ -0.67
RFFL-203ENST00000413582 IGLV3-22A0A075B6J6 115 aa10.84□□□□□ -0.67
RFFL-203ENST00000413582 MED19A0JLT2 244 aaPredicted RBP10.84□□□□□ -0.67
RFFL-203ENST00000413582 NT5C1B-RDH14C9J2C7 533 aa10.84□□□□□ -0.67
RFFL-203ENST00000413582 FAM86B1E9PN63 330 aa10.84□□□□□ -0.67
RFFL-203ENST00000413582 FOSP01100 380 aaPredicted RBP10.84□□□□□ -0.67
RFFL-203ENST00000413582 FAM86B2P0C5J1 330 aa10.84□□□□□ -0.67
RFFL-203ENST00000413582 ZSCAN20P17040 1043 aaPredicted RBP10.84□□□□□ -0.67
RFFL-203ENST00000413582 CA8P35219 290 aa10.84□□□□□ -0.67
RFFL-203ENST00000413582 LIFRP42702 1097 aa10.84□□□□□ -0.67
RFFL-203ENST00000413582 CLK2P49760 499 aaKnown RBP10.84□□□□□ -0.67
RFFL-203ENST00000413582 ADCY7P51828 1080 aa10.84□□□□□ -0.67
RFFL-203ENST00000413582 NAPAP54920 295 aa10.84□□□□□ -0.67
RFFL-203ENST00000413582 BCAR1P56945 870 aa10.84□□□□□ -0.67
RFFL-203ENST00000413582 NLRP11P59045 1033 aaKnown RBP10.84□□□□□ -0.67
RFFL-203ENST00000413582 AP3B2Q13367 1082 aa10.84□□□□□ -0.67
RFFL-203ENST00000413582 TMC5Q6UXY8 1006 aa10.84□□□□□ -0.67
RFFL-203ENST00000413582 MICU3Q86XE3 530 aa10.84□□□□□ -0.67
RFFL-203ENST00000413582 CKAP2LQ8IYA6 745 aa10.84□□□□□ -0.67
RFFL-203ENST00000413582 VPS52Q8N1B4 723 aa10.84□□□□□ -0.67
RFFL-203ENST00000413582 TMTC2Q8N394 836 aa10.84□□□□□ -0.67
RFFL-203ENST00000413582 DTWD2Q8NBA8 298 aa10.84□□□□□ -0.67
RFFL-203ENST00000413582 SLC22A17Q8WUG5 538 aa10.84□□□□□ -0.67
RFFL-203ENST00000413582 BCL7CQ8WUZ0 217 aaPredicted RBP10.84□□□□□ -0.67
RFFL-203ENST00000413582 MAP4K1Q92918 833 aa10.84□□□□□ -0.67
RFFL-203ENST00000413582 RMDN1Q96DB5 314 aa10.84□□□□□ -0.67
RFFL-203ENST00000413582 TMEM169Q96HH4 297 aa10.84□□□□□ -0.67
RFFL-203ENST00000413582 RTP3Q9BQQ7 232 aa10.84□□□□□ -0.67
RFFL-203ENST00000413582 SFXN1Q9H9B4 322 aa10.84□□□□□ -0.67
RFFL-203ENST00000413582 AKT3Q9Y243 479 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms