RNA–Protein interactions for RNA: ENST00000413517.1

HERPUD2-203, Transcript of HERPUD family member 2, humanhuman

TSL 5

Gene HERPUD2, Length 808 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-203ENST00000413517 CEP89Q96ST8 783 aa9.63□□□□□ -0.87
HERPUD2-203ENST00000413517 IFIH1Q9BYX4 1025 aaKnown RBP9.63□□□□□ -0.87
HERPUD2-203ENST00000413517 SLC28A3Q9HAS3 691 aa9.63□□□□□ -0.87
HERPUD2-203ENST00000413517 WRAP73Q9P2S5 460 aaPredicted RBP9.63□□□□□ -0.87
HERPUD2-203ENST00000413517 SAMM50Q9Y512 469 aa9.63□□□□□ -0.87
HERPUD2-203ENST00000413517 KDM3AQ9Y4C1 1321 aa9.62□□□□□ -0.87
HERPUD2-203ENST00000413517 SMIM35A0A1B0GVV1 85 aa9.62□□□□□ -0.87
HERPUD2-203ENST00000413517 KIF28PB7ZC32 967 aa9.62□□□□□ -0.87
HERPUD2-203ENST00000413517 CCNT1O60563 726 aaKnown RBP9.62□□□□□ -0.87
HERPUD2-203ENST00000413517 VTNP04004 478 aa9.62□□□□□ -0.87
HERPUD2-203ENST00000413517 GCFC2P16383 781 aaKnown RBP9.62□□□□□ -0.87
HERPUD2-203ENST00000413517 CD52P31358 61 aa9.62□□□□□ -0.87
HERPUD2-203ENST00000413517 CLCN3P51790 818 aa9.62□□□□□ -0.87
HERPUD2-203ENST00000413517 JAK3P52333 1124 aa9.62□□□□□ -0.87
HERPUD2-203ENST00000413517 RABEP1Q15276 862 aa9.62□□□□□ -0.87
HERPUD2-203ENST00000413517 TARBP2Q15633 366 aaKnown RBP9.62□□□□□ -0.87
HERPUD2-203ENST00000413517 ZNF484Q5JVG2 852 aa9.62□□□□□ -0.87
HERPUD2-203ENST00000413517 MIER3Q7Z3K6 550 aa9.62□□□□□ -0.87
HERPUD2-203ENST00000413517 RTN4RL1Q86UN2 441 aaPredicted RBP9.62□□□□□ -0.87
HERPUD2-203ENST00000413517 MYOCDQ8IZQ8 938 aa9.62□□□□□ -0.87
HERPUD2-203ENST00000413517 MAFAQ8NHW3 353 aaPredicted RBP9.62□□□□□ -0.87
HERPUD2-203ENST00000413517 SEPT8Q92599 483 aa9.62□□□□□ -0.87
HERPUD2-203ENST00000413517 PPP1R16BQ96T49 567 aa9.62□□□□□ -0.87
HERPUD2-203ENST00000413517 SH2D3AQ9BRG2 576 aa9.62□□□□□ -0.87
HERPUD2-203ENST00000413517 LLPHQ9BRT6 129 aaKnown RBP9.62□□□□□ -0.87
HERPUD2-203ENST00000413517 TMEM60Q9H2L4 133 aa9.62□□□□□ -0.87
HERPUD2-203ENST00000413517 CERS4Q9HA82 394 aa9.62□□□□□ -0.87
HERPUD2-203ENST00000413517 TRPV2Q9Y5S1 764 aa9.62□□□□□ -0.87
HERPUD2-203ENST00000413517 PLXNA4Q9HCM2 1894 aa9.62□□□□□ -0.87
HERPUD2-203ENST00000413517 TCF20Q9UGU0 1960 aaKnown RBP9.61□□□□□ -0.87
HERPUD2-203ENST00000413517 TLL1O43897 1013 aa9.61□□□□□ -0.87
HERPUD2-203ENST00000413517 FOSL2P15408 326 aa9.61□□□□□ -0.87
HERPUD2-203ENST00000413517 SFNP31947 248 aa9.61□□□□□ -0.87
HERPUD2-203ENST00000413517 HTRA4P83105 476 aaPredicted RBP9.61□□□□□ -0.87
HERPUD2-203ENST00000413517 PPP2R5CQ13362 524 aa9.61□□□□□ -0.87
HERPUD2-203ENST00000413517 DRP2Q13474 957 aa9.61□□□□□ -0.87
HERPUD2-203ENST00000413517 TMEM266Q2M3C6 531 aa9.61□□□□□ -0.87
HERPUD2-203ENST00000413517 TSHZ1Q6ZSZ6 1077 aa9.61□□□□□ -0.87
HERPUD2-203ENST00000413517 RSPH3Q86UC2 560 aa9.61□□□□□ -0.87
HERPUD2-203ENST00000413517 CKAP2LQ8IYA6 745 aa9.61□□□□□ -0.87
HERPUD2-203ENST00000413517 LRRC71Q8N4P6 559 aa9.61□□□□□ -0.87
HERPUD2-203ENST00000413517 RDM1Q8NG50 284 aa9.61□□□□□ -0.87
HERPUD2-203ENST00000413517 ZNF668Q96K58 619 aaPredicted RBP9.61□□□□□ -0.87
HERPUD2-203ENST00000413517 ZSCAN31Q96LW9 406 aaPredicted RBP9.61□□□□□ -0.87
HERPUD2-203ENST00000413517 CELF4Q9BZC1 486 aaKnown RBP9.61□□□□□ -0.87
HERPUD2-203ENST00000413517 TMX1Q9H3N1 280 aa9.61□□□□□ -0.87
HERPUD2-203ENST00000413517 SH2B1Q9NRF2 756 aaPredicted RBP9.61□□□□□ -0.87
HERPUD2-203ENST00000413517 TCEAL9Q9UHQ7 104 aa9.61□□□□□ -0.87
HERPUD2-203ENST00000413517 LINC01553A4QN01 128 aa9.6□□□□□ -0.87
HERPUD2-203ENST00000413517 TBX3O15119 743 aa9.6□□□□□ -0.87
HERPUD2-203ENST00000413517 MGEA5O60502 916 aa9.6□□□□□ -0.87
HERPUD2-203ENST00000413517 LPXNO60711 386 aa9.6□□□□□ -0.87
HERPUD2-203ENST00000413517 EFCAB14O75071 495 aa9.6□□□□□ -0.87
HERPUD2-203ENST00000413517 GPR32O75388 356 aa9.6□□□□□ -0.87
HERPUD2-203ENST00000413517 UPP2O95045 317 aa9.6□□□□□ -0.87
HERPUD2-203ENST00000413517 LINC00271P0C7V0 271 aa9.6□□□□□ -0.87
HERPUD2-203ENST00000413517 KIZQ2M2Z5 673 aa9.6□□□□□ -0.87
HERPUD2-203ENST00000413517 PLA2G4FQ68DD2 849 aa9.6□□□□□ -0.87
HERPUD2-203ENST00000413517 ANO5Q75V66 913 aa9.6□□□□□ -0.87
HERPUD2-203ENST00000413517 CRIPAKQ8N1N5 446 aa9.6□□□□□ -0.87
HERPUD2-203ENST00000413517 FBXO18Q8NFZ0 1043 aa9.6□□□□□ -0.87
HERPUD2-203ENST00000413517 APBB2Q92870 758 aa9.6□□□□□ -0.87
HERPUD2-203ENST00000413517 TOP1MTQ969P6 601 aa9.6□□□□□ -0.87
HERPUD2-203ENST00000413517 TMX3Q96JJ7 454 aa9.6□□□□□ -0.87
HERPUD2-203ENST00000413517 C8orf76Q96K31 380 aa9.6□□□□□ -0.87
HERPUD2-203ENST00000413517 FAM167AQ96KS9 214 aa9.6□□□□□ -0.87
HERPUD2-203ENST00000413517 FAM20AQ96MK3 541 aa9.6□□□□□ -0.87
HERPUD2-203ENST00000413517 RAD9AQ99638 391 aa9.6□□□□□ -0.87
HERPUD2-203ENST00000413517 RC3H2Q9HBD1 1191 aaKnown RBP9.6□□□□□ -0.87
HERPUD2-203ENST00000413517 ERVK-5Q9HDB9 667 aa9.6□□□□□ -0.87
HERPUD2-203ENST00000413517 PRDM6Q9NQX0 595 aa9.6□□□□□ -0.87
HERPUD2-203ENST00000413517 RGL1Q9NZL6 768 aa9.6□□□□□ -0.87
HERPUD2-203ENST00000413517 SEPT9Q9UHD8 586 aaPredicted RBP9.6□□□□□ -0.87
HERPUD2-203ENST00000413517 PADI3Q9ULW8 664 aa9.6□□□□□ -0.87
HERPUD2-203ENST00000413517 NOC2LQ9Y3T9 749 aaKnown RBP9.6□□□□□ -0.87
HERPUD2-203ENST00000413517 IGKV6-21A0A0C4DH24 114 aa9.59□□□□□ -0.87
HERPUD2-203ENST00000413517 ENPP3O14638 875 aa9.59□□□□□ -0.87
HERPUD2-203ENST00000413517 ZBTB39O15060 712 aa9.59□□□□□ -0.87
HERPUD2-203ENST00000413517 AMHP03971 560 aa9.59□□□□□ -0.87
HERPUD2-203ENST00000413517 NPEPPSP55786 919 aa9.59□□□□□ -0.87
HERPUD2-203ENST00000413517 USP46P62068 366 aa9.59□□□□□ -0.87
HERPUD2-203ENST00000413517 MTERF2Q49AM1 385 aa9.59□□□□□ -0.87
HERPUD2-203ENST00000413517 XKR3Q5GH77 459 aa9.59□□□□□ -0.87
HERPUD2-203ENST00000413517 IER5Q5VY09 327 aa9.59□□□□□ -0.87
HERPUD2-203ENST00000413517 NCAPH2Q6IBW4 605 aa9.59□□□□□ -0.87
HERPUD2-203ENST00000413517 EFCAB12Q6NXP0 572 aa9.59□□□□□ -0.87
HERPUD2-203ENST00000413517 FAM228AQ86W67 206 aa9.59□□□□□ -0.87
HERPUD2-203ENST00000413517 NME8Q8N427 588 aa9.59□□□□□ -0.87
HERPUD2-203ENST00000413517 METTL13Q8N6R0 699 aa9.59□□□□□ -0.87
HERPUD2-203ENST00000413517 ZNF454Q8N9F8 522 aa9.59□□□□□ -0.87
HERPUD2-203ENST00000413517 PRR7Q8TB68 274 aa9.59□□□□□ -0.87
HERPUD2-203ENST00000413517 GDPD5Q8WTR4 605 aa9.59□□□□□ -0.87
HERPUD2-203ENST00000413517 ARNTL2Q8WYA1 636 aa9.59□□□□□ -0.87
HERPUD2-203ENST00000413517 TNPO1Q92973 898 aaKnown RBP9.59□□□□□ -0.87
HERPUD2-203ENST00000413517 MTMR9Q96QG7 549 aa9.59□□□□□ -0.87
HERPUD2-203ENST00000413517 OSMRQ99650 979 aa9.59□□□□□ -0.87
HERPUD2-203ENST00000413517 ZBED2Q9BTP6 218 aa9.59□□□□□ -0.87
HERPUD2-203ENST00000413517 NIFKQ9BYG3 293 aaKnown RBP9.59□□□□□ -0.87
HERPUD2-203ENST00000413517 ADAMTS10Q9H324 1103 aa9.59□□□□□ -0.87
HERPUD2-203ENST00000413517 BRMS1Q9HCU9 246 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms