RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 CCDC134Q9H6E4 229 aa19.12■□□□□ 0.65
SDCBP-202ENST00000413219 CNOT7Q9UIV1 285 aaKnown RBP19.12■□□□□ 0.65
SDCBP-202ENST00000413219 SPATA31C1P0DKV0 1188 aa19.11■□□□□ 0.65
SDCBP-202ENST00000413219 EZRP15311 586 aaKnown RBP19.11■□□□□ 0.65
SDCBP-202ENST00000413219 ELF1P32519 619 aa19.11■□□□□ 0.65
SDCBP-202ENST00000413219 EIF6P56537 245 aaKnown RBP19.11■□□□□ 0.65
SDCBP-202ENST00000413219 MFSD14BQ5SR56 506 aa19.11■□□□□ 0.65
SDCBP-202ENST00000413219 DENND2CQ68D51 928 aa19.11■□□□□ 0.65
SDCBP-202ENST00000413219 PIGWQ7Z7B1 504 aa19.11■□□□□ 0.65
SDCBP-202ENST00000413219 CRYGNQ8WXF5 182 aa19.11■□□□□ 0.65
SDCBP-202ENST00000413219 GPR101Q96P66 508 aaPredicted RBP19.11■□□□□ 0.65
SDCBP-202ENST00000413219 OSGEPQ9NPF4 335 aa19.11■□□□□ 0.65
SDCBP-202ENST00000413219 DONSONQ9NYP3 566 aa19.11■□□□□ 0.65
SDCBP-202ENST00000413219 PPP1R9AQ9ULJ8 1098 aa19.11■□□□□ 0.65
SDCBP-202ENST00000413219 BACH1O14867 736 aa19.1■□□□□ 0.65
SDCBP-202ENST00000413219 CHN1P15882 459 aa19.1■□□□□ 0.65
SDCBP-202ENST00000413219 GAP43P17677 238 aa19.1■□□□□ 0.65
SDCBP-202ENST00000413219 CASP4P49662 377 aa19.1■□□□□ 0.65
SDCBP-202ENST00000413219 HADHBP55084 474 aaKnown RBP19.1■□□□□ 0.65
SDCBP-202ENST00000413219 PSMC6P62333 389 aa19.1■□□□□ 0.65
SDCBP-202ENST00000413219 GPSM2P81274 684 aa19.1■□□□□ 0.65
SDCBP-202ENST00000413219 PABPC4Q13310 644 aaKnown RBP eCLIP19.1■□□□□ 0.655e-7■■■□□ 16
SDCBP-202ENST00000413219 Q4G0T1 1027 aa19.1■□□□□ 0.65
SDCBP-202ENST00000413219 KIAA1755Q5JYT7 1200 aa19.1■□□□□ 0.65
SDCBP-202ENST00000413219 GJB7Q6PEY0 223 aa19.1■□□□□ 0.65
SDCBP-202ENST00000413219 COL23A1Q86Y22 540 aaPredicted RBP19.1■□□□□ 0.65
SDCBP-202ENST00000413219 MDM1Q8TC05 714 aa19.1■□□□□ 0.65
SDCBP-202ENST00000413219 ATXN2LQ8WWM7 1075 aaKnown RBP19.1■□□□□ 0.65
SDCBP-202ENST00000413219 LRRC4CQ9HCJ2 640 aa19.1■□□□□ 0.65
SDCBP-202ENST00000413219 OLFML3Q9NRN5 406 aa19.1■□□□□ 0.65
SDCBP-202ENST00000413219 ODF2LQ9ULJ1 636 aa19.1■□□□□ 0.65
SDCBP-202ENST00000413219 NR2E1Q9Y466 385 aa19.1■□□□□ 0.65
SDCBP-202ENST00000413219 USP17L15C9J2P7 530 aa19.1■□□□□ 0.65
SDCBP-202ENST00000413219 USP17L13C9JLJ4 530 aa19.1■□□□□ 0.65
SDCBP-202ENST00000413219 USP17L11C9JVI0 530 aa19.1■□□□□ 0.65
SDCBP-202ENST00000413219 USP17L18D6R9N7 530 aa19.1■□□□□ 0.65
SDCBP-202ENST00000413219 USP17L22D6RA61 530 aa19.1■□□□□ 0.65
SDCBP-202ENST00000413219 USP17L17D6RBQ6 530 aa19.1■□□□□ 0.65
SDCBP-202ENST00000413219 USP17L19D6RCP7 530 aa19.1■□□□□ 0.65
SDCBP-202ENST00000413219 USP17L20D6RJB6 530 aa19.1■□□□□ 0.65
SDCBP-202ENST00000413219 EIF3DO15371 548 aaKnown RBP eCLIP19.1■□□□□ 0.65
SDCBP-202ENST00000413219 PPP1R12BO60237 982 aaPredicted RBP19.1■□□□□ 0.65
SDCBP-202ENST00000413219 AGTP01019 485 aa19.1■□□□□ 0.65
SDCBP-202ENST00000413219 MMEP08473 750 aa19.1■□□□□ 0.65
SDCBP-202ENST00000413219 SLC16A2P36021 539 aa19.1■□□□□ 0.65
SDCBP-202ENST00000413219 USP17L24Q0WX57 530 aa19.1■□□□□ 0.65
SDCBP-202ENST00000413219 MAPK7Q13164 816 aa19.1■□□□□ 0.65
SDCBP-202ENST00000413219 C6orf118Q5T5N4 469 aa19.1■□□□□ 0.65
SDCBP-202ENST00000413219 USP17L6PQ6QN14 398 aa19.1■□□□□ 0.65
SDCBP-202ENST00000413219 JAMLQ86YT9 394 aa19.1■□□□□ 0.65
SDCBP-202ENST00000413219 GLYCTKQ8IVS8 523 aa19.1■□□□□ 0.65
SDCBP-202ENST00000413219 MKNK1Q9BUB5 465 aa19.1■□□□□ 0.65
SDCBP-202ENST00000413219 TRIM31Q9BZY9 425 aa19.1■□□□□ 0.65
SDCBP-202ENST00000413219 PARP2Q9UGN5 583 aa19.1■□□□□ 0.65
SDCBP-202ENST00000413219 SPDYE3A6NKU9 549 aa19.09■□□□□ 0.65
SDCBP-202ENST00000413219 KIAA0391O15091 583 aaKnown RBP19.09■□□□□ 0.65
SDCBP-202ENST00000413219 TBCAO75347 108 aaKnown RBP19.09■□□□□ 0.65
SDCBP-202ENST00000413219 UFL1O94874 794 aa19.09■□□□□ 0.65
SDCBP-202ENST00000413219 PSMC2P35998 433 aaKnown RBP19.09■□□□□ 0.65
SDCBP-202ENST00000413219 ADCY2Q08462 1091 aa19.09■□□□□ 0.65
SDCBP-202ENST00000413219 MSL1Q68DK7 614 aa19.09■□□□□ 0.65
SDCBP-202ENST00000413219 ZDHHC24Q6UX98 284 aa19.09■□□□□ 0.65
SDCBP-202ENST00000413219 BTNL9Q6UXG8 535 aa19.09■□□□□ 0.65
SDCBP-202ENST00000413219 SLC51AQ86UW1 340 aa19.09■□□□□ 0.65
SDCBP-202ENST00000413219 CLEC10AQ8IUN9 316 aa19.09■□□□□ 0.65
SDCBP-202ENST00000413219 FAM20AQ96MK3 541 aa19.09■□□□□ 0.65
SDCBP-202ENST00000413219 STMN4Q9H169 189 aaPredicted RBP19.09■□□□□ 0.65
SDCBP-202ENST00000413219 ADAM7Q9H2U9 754 aa19.09■□□□□ 0.65
SDCBP-202ENST00000413219 DAGLAQ9Y4D2 1042 aa19.09■□□□□ 0.65
SDCBP-202ENST00000413219 SHBGP04278 402 aa19.09■□□□□ 0.65
SDCBP-202ENST00000413219 KCNQ4P56696 695 aa19.09■□□□□ 0.65
SDCBP-202ENST00000413219 FAM186BQ8IYM0 893 aa19.09■□□□□ 0.65
SDCBP-202ENST00000413219 RNF25Q96BH1 459 aaPredicted RBP19.09■□□□□ 0.65
SDCBP-202ENST00000413219 SLC12A4Q9UP95 1085 aa19.09■□□□□ 0.65
SDCBP-202ENST00000413219 RTCBQ9Y3I0 505 aaKnown RBP19.09■□□□□ 0.65
SDCBP-202ENST00000413219 FRMPD4Q14CM0 1322 aa19.08■□□□□ 0.64
SDCBP-202ENST00000413219 SYNGAP1Q96PV0 1343 aa19.08■□□□□ 0.64
SDCBP-202ENST00000413219 ANKRD62A6NC57 917 aa19.08■□□□□ 0.64
SDCBP-202ENST00000413219 MIF4GDA9UHW6 222 aaKnown RBP19.08■□□□□ 0.64
SDCBP-202ENST00000413219 RGS16O15492 202 aaPredicted RBP19.08■□□□□ 0.64
SDCBP-202ENST00000413219 PHF2O75151 1096 aa19.08■□□□□ 0.64
SDCBP-202ENST00000413219 GCNT3O95395 438 aa19.08■□□□□ 0.64
SDCBP-202ENST00000413219 CHRNA3P32297 505 aa19.08■□□□□ 0.64
SDCBP-202ENST00000413219 ELF3P78545 371 aaPredicted RBP19.08■□□□□ 0.64
SDCBP-202ENST00000413219 ARHGAP4P98171 946 aa19.08■□□□□ 0.64
SDCBP-202ENST00000413219 PRPF4BQ13523 1007 aaKnown RBP19.08■□□□□ 0.64
SDCBP-202ENST00000413219 DRAP1Q14919 205 aaPredicted RBP19.08■□□□□ 0.64
SDCBP-202ENST00000413219 TCEAL1Q15170 157 aa19.08■□□□□ 0.64
SDCBP-202ENST00000413219 SLC15A2Q16348 729 aa19.08■□□□□ 0.64
SDCBP-202ENST00000413219 QRICH1Q2TAL8 776 aa19.08■□□□□ 0.64
SDCBP-202ENST00000413219 ATP6V0A4Q9HBG4 840 aa19.08■□□□□ 0.64
SDCBP-202ENST00000413219 SERPINB13Q9UIV8 391 aa19.08■□□□□ 0.64
SDCBP-202ENST00000413219 GGA1Q9UJY5 639 aa19.08■□□□□ 0.64
SDCBP-202ENST00000413219 DNAJC12Q9UKB3 198 aa19.08■□□□□ 0.64
SDCBP-202ENST00000413219 PCDHB13Q9Y5F0 798 aa19.08■□□□□ 0.64
SDCBP-202ENST00000413219 AHDC1Q5TGY3 1603 aaPredicted RBP19.08■□□□□ 0.64
SDCBP-202ENST00000413219 IGSF9BQ9UPX0 1349 aa19.07■□□□□ 0.64
SDCBP-202ENST00000413219 GNPATO15228 680 aa19.07■□□□□ 0.64
SDCBP-202ENST00000413219 TGFB1I1O43294 461 aa19.07■□□□□ 0.64
SDCBP-202ENST00000413219 EYA4O95677 639 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms