RNA–Protein interactions for RNA: ENST00000412649.5

CLTCL1-201, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 4,635 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-201ENST00000412649 HAUS1Q96CS2 278 aa14.93□□□□□ -0.02
CLTCL1-201ENST00000412649 PURBQ96QR8 312 aaKnown RBP14.93□□□□□ -0.02
CLTCL1-201ENST00000412649 CYTH2Q99418 400 aa14.93□□□□□ -0.02
CLTCL1-201ENST00000412649 Q9H521 79 aa14.93□□□□□ -0.02
CLTCL1-201ENST00000412649 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.93□□□□□ -0.02
CLTCL1-201ENST00000412649 AXIN2Q9Y2T1 843 aa14.93□□□□□ -0.02
CLTCL1-201ENST00000412649 CES2O00748 559 aa14.93□□□□□ -0.02
CLTCL1-201ENST00000412649 IFNB1P01574 187 aa14.93□□□□□ -0.02
CLTCL1-201ENST00000412649 UCHL3P15374 230 aa14.93□□□□□ -0.02
CLTCL1-201ENST00000412649 ATP4AP20648 1035 aa14.93□□□□□ -0.02
CLTCL1-201ENST00000412649 NBPF20Q3BBV1 942 aa14.93□□□□□ -0.02
CLTCL1-201ENST00000412649 RNF207Q6ZRF8 634 aa14.93□□□□□ -0.02
CLTCL1-201ENST00000412649 MAEAQ7L5Y9 396 aa14.93□□□□□ -0.02
CLTCL1-201ENST00000412649 APBB1IPQ7Z5R6 666 aaPredicted RBP14.93□□□□□ -0.02
CLTCL1-201ENST00000412649 IRF2BP1Q8IU81 584 aa14.93□□□□□ -0.02
CLTCL1-201ENST00000412649 CCT6BQ92526 530 aa14.93□□□□□ -0.02
CLTCL1-201ENST00000412649 ZNF653Q96CK0 615 aa14.93□□□□□ -0.02
CLTCL1-201ENST00000412649 ACTN1P12814 892 aa14.93□□□□□ -0.02
CLTCL1-201ENST00000412649 VHLP40337 213 aa14.93□□□□□ -0.02
CLTCL1-201ENST00000412649 PIGSQ96S52 555 aa14.93□□□□□ -0.02
CLTCL1-201ENST00000412649 ANKRD2Q9GZV1 360 aa14.93□□□□□ -0.02
CLTCL1-201ENST00000412649 DNAJC12Q9UKB3 198 aa14.93□□□□□ -0.02
CLTCL1-201ENST00000412649 FAF1Q9UNN5 650 aaPredicted RBP14.93□□□□□ -0.02
CLTCL1-201ENST00000412649 HNRNPCL1O60812 293 aaKnown RBP14.93□□□□□ -0.02
CLTCL1-201ENST00000412649 GSTA2P09210 222 aa14.93□□□□□ -0.02
CLTCL1-201ENST00000412649 MARK3P27448 753 aa14.93□□□□□ -0.02
CLTCL1-201ENST00000412649 TROAPQ12815 778 aa14.93□□□□□ -0.02
CLTCL1-201ENST00000412649 TMED1Q13445 227 aa14.93□□□□□ -0.02
CLTCL1-201ENST00000412649 TMED8Q6PL24 325 aaPredicted RBP14.93□□□□□ -0.02
CLTCL1-201ENST00000412649 BTNL9Q6UXG8 535 aa14.93□□□□□ -0.02
CLTCL1-201ENST00000412649 ERICH1Q86X53 443 aa14.93□□□□□ -0.02
CLTCL1-201ENST00000412649 TRIM55Q9BYV6 548 aa14.93□□□□□ -0.02
CLTCL1-201ENST00000412649 NAGPAQ9UK23 515 aa14.93□□□□□ -0.02
CLTCL1-201ENST00000412649 FRMPD2Q68DX3 1309 aaPredicted RBP14.92□□□□□ -0.02
CLTCL1-201ENST00000412649 RIMS1Q86UR5 1692 aaKnown RBP14.92□□□□□ -0.02
CLTCL1-201ENST00000412649 ITGA4P13612 1032 aa14.92□□□□□ -0.02
CLTCL1-201ENST00000412649 PICALMQ13492 652 aa14.92□□□□□ -0.02
CLTCL1-201ENST00000412649 B4GALNT2Q8NHY0 566 aa14.92□□□□□ -0.02
CLTCL1-201ENST00000412649 SLC35G2Q8TBE7 412 aa14.92□□□□□ -0.02
CLTCL1-201ENST00000412649 PGM2Q96G03 612 aa14.92□□□□□ -0.02
CLTCL1-201ENST00000412649 DCTN4Q9UJW0 460 aa14.92□□□□□ -0.02
CLTCL1-201ENST00000412649 GGPS1O95749 300 aa14.92□□□□□ -0.02
CLTCL1-201ENST00000412649 COPB2P35606 906 aa14.92□□□□□ -0.02
CLTCL1-201ENST00000412649 CASP7P55210 303 aa14.92□□□□□ -0.02
CLTCL1-201ENST00000412649 TRADDQ15628 312 aa14.92□□□□□ -0.02
CLTCL1-201ENST00000412649 FBXO25Q8TCJ0 367 aa14.92□□□□□ -0.02
CLTCL1-201ENST00000412649 ABCC6O95255 1503 aa14.92□□□□□ -0.02
CLTCL1-201ENST00000412649 TARSP26639 723 aaKnown RBP14.92□□□□□ -0.02
CLTCL1-201ENST00000412649 SERPINB6P35237 376 aa14.92□□□□□ -0.02
CLTCL1-201ENST00000412649 CAV1Q03135 178 aa14.92□□□□□ -0.02
CLTCL1-201ENST00000412649 ORC2Q13416 577 aaPredicted RBP14.92□□□□□ -0.02
CLTCL1-201ENST00000412649 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.92□□□□□ -0.02
CLTCL1-201ENST00000412649 EGFL6Q8IUX8 553 aa14.92□□□□□ -0.02
CLTCL1-201ENST00000412649 PALM2Q8IXS6 379 aa14.92□□□□□ -0.02
CLTCL1-201ENST00000412649 DTX3LQ8TDB6 740 aa14.92□□□□□ -0.02
CLTCL1-201ENST00000412649 NLRP3Q96P20 1036 aa14.92□□□□□ -0.02
CLTCL1-201ENST00000412649 MXD3Q9BW11 206 aa14.92□□□□□ -0.02
CLTCL1-201ENST00000412649 MIS12Q9H081 205 aa14.92□□□□□ -0.02
CLTCL1-201ENST00000412649 PSTPIP2Q9H939 334 aa14.92□□□□□ -0.02
CLTCL1-201ENST00000412649 ZNF148Q9UQR1 794 aa14.92□□□□□ -0.02
CLTCL1-201ENST00000412649 PCDHGC5Q9Y5F6 944 aa14.92□□□□□ -0.02
CLTCL1-201ENST00000412649 CHMP2AO43633 222 aa14.91□□□□□ -0.02
CLTCL1-201ENST00000412649 HLA-DOAP06340 250 aa14.91□□□□□ -0.02
CLTCL1-201ENST00000412649 SDCCAG8Q86SQ7 713 aaPredicted RBP14.91□□□□□ -0.02
CLTCL1-201ENST00000412649 SLFN12Q8IYM2 578 aa14.91□□□□□ -0.02
CLTCL1-201ENST00000412649 FAM208AQ9UK61 1670 aaKnown RBP14.91□□□□□ -0.02
CLTCL1-201ENST00000412649 MYO5BQ9ULV0 1848 aa14.91□□□□□ -0.02
CLTCL1-201ENST00000412649 TOM1O60784 492 aa14.91□□□□□ -0.02
CLTCL1-201ENST00000412649 MAPK7Q13164 816 aa14.91□□□□□ -0.02
CLTCL1-201ENST00000412649 NAALADL2Q58DX5 795 aa14.91□□□□□ -0.02
CLTCL1-201ENST00000412649 MAP3K21Q5TCX8 1036 aa14.91□□□□□ -0.02
CLTCL1-201ENST00000412649 NBPF5PQ86XG9 351 aaPredicted RBP14.91□□□□□ -0.02
CLTCL1-201ENST00000412649 XRN1Q8IZH2 1706 aaKnown RBP14.91□□□□□ -0.02
CLTCL1-201ENST00000412649 CFAP69A5D8W1 941 aa14.91□□□□□ -0.02
CLTCL1-201ENST00000412649 USP17L3A6NCW0 530 aa14.91□□□□□ -0.02
CLTCL1-201ENST00000412649 USP17L4A6NCW7 530 aa14.91□□□□□ -0.02
CLTCL1-201ENST00000412649 CDH16O75309 829 aa14.91□□□□□ -0.02
CLTCL1-201ENST00000412649 HNRNPH3P31942 346 aaKnown RBP14.91□□□□□ -0.02
CLTCL1-201ENST00000412649 ROR2Q01974 943 aaKnown RBP14.91□□□□□ -0.02
CLTCL1-201ENST00000412649 USP17L1Q7RTZ2 530 aa14.91□□□□□ -0.02
CLTCL1-201ENST00000412649 LBHD1Q9BQE6 289 aaPredicted RBP14.91□□□□□ -0.02
CLTCL1-201ENST00000412649 CARD9Q9H257 536 aa14.91□□□□□ -0.02
CLTCL1-201ENST00000412649 SIK3Q9Y2K2 1263 aa14.91□□□□□ -0.02
CLTCL1-201ENST00000412649 ZNF263O14978 683 aa14.91□□□□□ -0.02
CLTCL1-201ENST00000412649 SPAG7O75391 227 aa14.91□□□□□ -0.02
CLTCL1-201ENST00000412649 ACADSP16219 412 aa14.91□□□□□ -0.02
CLTCL1-201ENST00000412649 IFI35P80217 286 aaPredicted RBP14.91□□□□□ -0.02
CLTCL1-201ENST00000412649 LMNB2Q03252 620 aa14.91□□□□□ -0.02
CLTCL1-201ENST00000412649 SLC17A8Q8NDX2 589 aa14.91□□□□□ -0.02
CLTCL1-201ENST00000412649 CHCHD3Q9NX63 227 aaKnown RBP14.91□□□□□ -0.02
CLTCL1-201ENST00000412649 RGL1Q9NZL6 768 aa14.91□□□□□ -0.02
CLTCL1-201ENST00000412649 TTLL1O95922 423 aa14.9□□□□□ -0.02
CLTCL1-201ENST00000412649 HSPA1LP34931 641 aa14.9□□□□□ -0.02
CLTCL1-201ENST00000412649 KCNMA1Q12791 1236 aa14.9□□□□□ -0.02
CLTCL1-201ENST00000412649 TRIM28Q13263 835 aaKnown RBP14.9□□□□□ -0.02
CLTCL1-201ENST00000412649 ARHGAP22Q7Z5H3 698 aa14.9□□□□□ -0.02
CLTCL1-201ENST00000412649 PPM1KQ8N3J5 372 aa14.9□□□□□ -0.02
CLTCL1-201ENST00000412649 VTI1AQ96AJ9 217 aa14.9□□□□□ -0.02
CLTCL1-201ENST00000412649 INPP4AQ96PE3 977 aaPredicted RBP14.9□□□□□ -0.02
CLTCL1-201ENST00000412649 PDP2Q9P2J9 529 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms