RNA–Protein interactions for RNA: ENST00000412141.1

LINC00963-201, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best)

Gene LINC00963, Length 739 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-201ENST00000412141 HAS1Q92839 578 aa13.02□□□□□ -0.33
LINC00963-201ENST00000412141 FAM20AQ96MK3 541 aa13.02□□□□□ -0.33
LINC00963-201ENST00000412141 NSUN3Q9H649 340 aaKnown RBP13.02□□□□□ -0.33
LINC00963-201ENST00000412141 ATP6V0A4Q9HBG4 840 aa13.02□□□□□ -0.33
LINC00963-201ENST00000412141 KCNMB3Q9NPA1 279 aa13.02□□□□□ -0.33
LINC00963-201ENST00000412141 CLDND1Q9NY35 253 aa13.02□□□□□ -0.33
LINC00963-201ENST00000412141 SUCLA2Q9P2R7 463 aaPredicted RBP13.02□□□□□ -0.33
LINC00963-201ENST00000412141 RAPGEFL1Q9UHV5 662 aa13.02□□□□□ -0.33
LINC00963-201ENST00000412141 VAV3Q9UKW4 847 aa13.02□□□□□ -0.33
LINC00963-201ENST00000412141 PLAGL2Q9UPG8 496 aa13.02□□□□□ -0.33
LINC00963-201ENST00000412141 RWDD3Q9Y3V2 267 aa13.02□□□□□ -0.33
LINC00963-201ENST00000412141 A0A087WZ62 844 aa13.01□□□□□ -0.33
LINC00963-201ENST00000412141 C5orf67F2Z3F1 127 aa13.01□□□□□ -0.33
LINC00963-201ENST00000412141 ZBTB39O15060 712 aa13.01□□□□□ -0.33
LINC00963-201ENST00000412141 EIF5BO60841 1220 aaKnown RBP13.01□□□□□ -0.33
LINC00963-201ENST00000412141 BAG4O95429 457 aaKnown RBP13.01□□□□□ -0.33
LINC00963-201ENST00000412141 ITGB1P05556 798 aa13.01□□□□□ -0.33
LINC00963-201ENST00000412141 DARSP14868 501 aaKnown RBP13.01□□□□□ -0.33
LINC00963-201ENST00000412141 ZSCAN20P17040 1043 aaPredicted RBP13.01□□□□□ -0.33
LINC00963-201ENST00000412141 DNAJB1P25685 340 aa13.01□□□□□ -0.33
LINC00963-201ENST00000412141 GTF2F1P35269 517 aaKnown RBP eCLIP13.01□□□□□ -0.33
LINC00963-201ENST00000412141 QARSP47897 775 aaKnown RBP13.01□□□□□ -0.33
LINC00963-201ENST00000412141 DNM2P50570 870 aa13.01□□□□□ -0.33
LINC00963-201ENST00000412141 CYP4A11Q02928 519 aa13.01□□□□□ -0.33
LINC00963-201ENST00000412141 ST3GAL1Q11201 340 aa13.01□□□□□ -0.33
LINC00963-201ENST00000412141 PPP2R5CQ13362 524 aa13.01□□□□□ -0.33
LINC00963-201ENST00000412141 CTTNQ14247 550 aaKnown RBP13.01□□□□□ -0.33
LINC00963-201ENST00000412141 DSC3Q14574 896 aa13.01□□□□□ -0.33
LINC00963-201ENST00000412141 LONRF3Q496Y0 759 aa13.01□□□□□ -0.33
LINC00963-201ENST00000412141 RHPN2Q8IUC4 686 aa13.01□□□□□ -0.33
LINC00963-201ENST00000412141 DIS3L2Q8IYB7 885 aaKnown RBP13.01□□□□□ -0.33
LINC00963-201ENST00000412141 DYDC2Q96IM9 177 aa13.01□□□□□ -0.33
LINC00963-201ENST00000412141 CEP170P1Q96L14 293 aa13.01□□□□□ -0.33
LINC00963-201ENST00000412141 NLRP4Q96MN2 994 aa13.01□□□□□ -0.33
LINC00963-201ENST00000412141 FDXACB1Q9BRP7 624 aaPredicted RBP13.01□□□□□ -0.33
LINC00963-201ENST00000412141 NIFKQ9BYG3 293 aaKnown RBP13.01□□□□□ -0.33
LINC00963-201ENST00000412141 C1orf112Q9NSG2 853 aa13.01□□□□□ -0.33
LINC00963-201ENST00000412141 WRAP73Q9P2S5 460 aaPredicted RBP13.01□□□□□ -0.33
LINC00963-201ENST00000412141 PCDHGC5Q9Y5F6 944 aa13.01□□□□□ -0.33
LINC00963-201ENST00000412141 NLRC5Q86WI3 1866 aa13□□□□□ -0.33
LINC00963-201ENST00000412141 A0A087WWV3 80 aa13□□□□□ -0.33
LINC00963-201ENST00000412141 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13□□□□□ -0.33
LINC00963-201ENST00000412141 WNT7AO00755 349 aa13□□□□□ -0.33
LINC00963-201ENST00000412141 MMP1P03956 469 aa13□□□□□ -0.33
LINC00963-201ENST00000412141 IRS1P35568 1242 aa13□□□□□ -0.33
LINC00963-201ENST00000412141 RBM23Q86U06 439 aaKnown RBP13□□□□□ -0.33
LINC00963-201ENST00000412141 TPH2Q8IWU9 490 aa13□□□□□ -0.33
LINC00963-201ENST00000412141 GADD45GIP1Q8TAE8 222 aaPredicted RBP13□□□□□ -0.33
LINC00963-201ENST00000412141 SPPL3Q8TCT6 385 aa13□□□□□ -0.33
LINC00963-201ENST00000412141 MICAL1Q8TDZ2 1067 aa13□□□□□ -0.33
LINC00963-201ENST00000412141 POF1BQ8WVV4 589 aa13□□□□□ -0.33
LINC00963-201ENST00000412141 TMEM143Q96AN5 459 aa13□□□□□ -0.33
LINC00963-201ENST00000412141 LXNQ9BS40 222 aa13□□□□□ -0.33
LINC00963-201ENST00000412141 PLVAPQ9BX97 442 aa13□□□□□ -0.33
LINC00963-201ENST00000412141 GCOM2Q9BZD3 368 aaPredicted RBP13□□□□□ -0.33
LINC00963-201ENST00000412141 TYW1Q9NV66 732 aaKnown RBP13□□□□□ -0.33
LINC00963-201ENST00000412141 LIMCH1Q9UPQ0 1083 aa13□□□□□ -0.33
LINC00963-201ENST00000412141 WDR81Q562E7 1941 aa13□□□□□ -0.33
LINC00963-201ENST00000412141 COL4A6Q14031 1691 aa12.99□□□□□ -0.33
LINC00963-201ENST00000412141 MAFO75444 373 aaPredicted RBP12.99□□□□□ -0.33
LINC00963-201ENST00000412141 P4HBP07237 508 aaKnown RBP12.99□□□□□ -0.33
LINC00963-201ENST00000412141 SRGAP2CP0DJJ0 459 aa12.99□□□□□ -0.33
LINC00963-201ENST00000412141 PBX3P40426 434 aa12.99□□□□□ -0.33
LINC00963-201ENST00000412141 TXKP42681 527 aa12.99□□□□□ -0.33
LINC00963-201ENST00000412141 POLGP54098 1239 aaPredicted RBP12.99□□□□□ -0.33
LINC00963-201ENST00000412141 FAM189BP81408 668 aa12.99□□□□□ -0.33
LINC00963-201ENST00000412141 HYAL1Q12794 435 aa12.99□□□□□ -0.33
LINC00963-201ENST00000412141 CAMK1Q14012 370 aa12.99□□□□□ -0.33
LINC00963-201ENST00000412141 EPHA7Q15375 998 aa12.99□□□□□ -0.33
LINC00963-201ENST00000412141 CALCRLQ16602 461 aa12.99□□□□□ -0.33
LINC00963-201ENST00000412141 XKR9Q5GH70 373 aa12.99□□□□□ -0.33
LINC00963-201ENST00000412141 PTCRAQ6ISU1 281 aaPredicted RBP12.99□□□□□ -0.33
LINC00963-201ENST00000412141 TNFRSF25Q93038 417 aa12.99□□□□□ -0.33
LINC00963-201ENST00000412141 CEP89Q96ST8 783 aa12.99□□□□□ -0.33
LINC00963-201ENST00000412141 NAP1L4Q99733 375 aaKnown RBP12.99□□□□□ -0.33
LINC00963-201ENST00000412141 LMAN2LQ9H0V9 348 aa12.99□□□□□ -0.33
LINC00963-201ENST00000412141 CYP26B1Q9NR63 512 aa12.99□□□□□ -0.33
LINC00963-201ENST00000412141 TMEM161AQ9NX61 479 aa12.99□□□□□ -0.33
LINC00963-201ENST00000412141 PCDHB12Q9Y5F1 795 aa12.99□□□□□ -0.33
LINC00963-201ENST00000412141 LINC01565O15544 149 aa12.98□□□□□ -0.33
LINC00963-201ENST00000412141 IL9P15248 144 aa12.98□□□□□ -0.33
LINC00963-201ENST00000412141 YWHABP31946 246 aaKnown RBP12.98□□□□□ -0.33
LINC00963-201ENST00000412141 MCM7P33993 719 aa12.98□□□□□ -0.33
LINC00963-201ENST00000412141 DLX2Q07687 328 aaPredicted RBP12.98□□□□□ -0.33
LINC00963-201ENST00000412141 LEXMQ3ZCV2 418 aa12.98□□□□□ -0.33
LINC00963-201ENST00000412141 CATSPER4Q7RTX7 472 aa12.98□□□□□ -0.33
LINC00963-201ENST00000412141 ECHDC2Q86YB7 292 aa12.98□□□□□ -0.33
LINC00963-201ENST00000412141 SLFN12Q8IYM2 578 aa12.98□□□□□ -0.33
LINC00963-201ENST00000412141 THNSL1Q8IYQ7 743 aa12.98□□□□□ -0.33
LINC00963-201ENST00000412141 ABI1Q8IZP0 508 aa12.98□□□□□ -0.33
LINC00963-201ENST00000412141 HELQQ8TDG4 1101 aa12.98□□□□□ -0.33
LINC00963-201ENST00000412141 PRPF31Q8WWY3 499 aaKnown RBP12.98□□□□□ -0.33
LINC00963-201ENST00000412141 SLC7A3Q8WY07 619 aa12.98□□□□□ -0.33
LINC00963-201ENST00000412141 PABPC5Q96DU9 382 aaKnown RBP12.98□□□□□ -0.33
LINC00963-201ENST00000412141 C8orf76Q96K31 380 aa12.98□□□□□ -0.33
LINC00963-201ENST00000412141 AAASQ9NRG9 546 aa12.98□□□□□ -0.33
LINC00963-201ENST00000412141 RNF216Q9NWF9 866 aaPredicted RBP12.98□□□□□ -0.33
LINC00963-201ENST00000412141 PCDHA12Q9UN75 941 aa12.98□□□□□ -0.33
LINC00963-201ENST00000412141 PIN4Q9Y237 131 aaKnown RBP12.98□□□□□ -0.33
LINC00963-201ENST00000412141 IGKV6-21A0A0C4DH24 114 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms