RNA–Protein interactions for RNA: ENST00000411552.5

NOD1-202, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 1 (best)

Gene NOD1, Length 794 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-202ENST00000411552 RTN4RL1Q86UN2 441 aaPredicted RBP18.21■□□□□ 0.51
NOD1-202ENST00000411552 FAM228AQ86W67 206 aa18.21■□□□□ 0.51
NOD1-202ENST00000411552 RHPN2Q8IUC4 686 aa18.21■□□□□ 0.51
NOD1-202ENST00000411552 NLRP7Q8WX94 980 aa18.21■□□□□ 0.51
NOD1-202ENST00000411552 TMEM143Q96AN5 459 aa18.21■□□□□ 0.51
NOD1-202ENST00000411552 CCDC43Q96MW1 224 aaKnown RBP18.21■□□□□ 0.51
NOD1-202ENST00000411552 SCLT1Q96NL6 688 aa18.21■□□□□ 0.51
NOD1-202ENST00000411552 GUCD1Q96NT3 240 aa18.21■□□□□ 0.51
NOD1-202ENST00000411552 FTHL17Q9BXU8 183 aa18.21■□□□□ 0.51
NOD1-202ENST00000411552 LCHNA4D1U4 455 aa18.2■□□□□ 0.5
NOD1-202ENST00000411552 GPR182O15218 404 aa18.2■□□□□ 0.5
NOD1-202ENST00000411552 GAS2O43903 313 aaKnown RBP18.2■□□□□ 0.5
NOD1-202ENST00000411552 UPP2O95045 317 aa18.2■□□□□ 0.5
NOD1-202ENST00000411552 EIF4BP23588 611 aaKnown RBP18.2■□□□□ 0.5
NOD1-202ENST00000411552 CDC42EP1Q00587 391 aa18.2■□□□□ 0.5
NOD1-202ENST00000411552 ECM1Q16610 540 aa18.2■□□□□ 0.5
NOD1-202ENST00000411552 PPP2R2DQ66LE6 453 aa18.2■□□□□ 0.5
NOD1-202ENST00000411552 ARL6IP4Q66PJ3 421 aaKnown RBP18.2■□□□□ 0.5
NOD1-202ENST00000411552 KSR1Q8IVT5 923 aa18.2■□□□□ 0.5
NOD1-202ENST00000411552 PRPF31Q8WWY3 499 aaKnown RBP18.2■□□□□ 0.5
NOD1-202ENST00000411552 TOP1MTQ969P6 601 aa18.2■□□□□ 0.5
NOD1-202ENST00000411552 NACC1Q96RE7 527 aa18.2■□□□□ 0.5
NOD1-202ENST00000411552 RAD9AQ99638 391 aa18.2■□□□□ 0.5
NOD1-202ENST00000411552 TSPYL2Q9H2G4 693 aaPredicted RBP18.2■□□□□ 0.5
NOD1-202ENST00000411552 SLC28A3Q9HAS3 691 aa18.2■□□□□ 0.5
NOD1-202ENST00000411552 XPNPEP1Q9NQW7 623 aa18.2■□□□□ 0.5
NOD1-202ENST00000411552 DBR1Q9UK59 544 aaKnown RBP18.2■□□□□ 0.5
NOD1-202ENST00000411552 COL6A3P12111 3177 aa18.2■□□□□ 0.5
NOD1-202ENST00000411552 VWA3AA6NCI4 1184 aa18.19■□□□□ 0.5
NOD1-202ENST00000411552 MGEA5O60502 916 aa18.19■□□□□ 0.5
NOD1-202ENST00000411552 ARHGEF15O94989 841 aa18.19■□□□□ 0.5
NOD1-202ENST00000411552 DARSP14868 501 aaKnown RBP18.19■□□□□ 0.5
NOD1-202ENST00000411552 MUTP22033 750 aa18.19■□□□□ 0.5
NOD1-202ENST00000411552 CDC25AP30304 524 aa18.19■□□□□ 0.5
NOD1-202ENST00000411552 SF3A1Q15459 793 aaKnown RBP18.19■□□□□ 0.5
NOD1-202ENST00000411552 ODR4Q5SWX8 454 aa18.19■□□□□ 0.5
NOD1-202ENST00000411552 FAM173BQ6P4H8 233 aa18.19■□□□□ 0.5
NOD1-202ENST00000411552 SPRYD3Q8NCJ5 442 aa18.19■□□□□ 0.5
NOD1-202ENST00000411552 SNX29Q8TEQ0 813 aa18.19■□□□□ 0.5
NOD1-202ENST00000411552 PSPC1Q8WXF1 523 aaKnown RBP18.19■□□□□ 0.5
NOD1-202ENST00000411552 MTRQ99707 1265 aa18.19■□□□□ 0.5
NOD1-202ENST00000411552 ATP6V0A4Q9HBG4 840 aa18.19■□□□□ 0.5
NOD1-202ENST00000411552 COL4A3BPQ9Y5P4 624 aa18.19■□□□□ 0.5
NOD1-202ENST00000411552 STK24Q9Y6E0 443 aa18.19■□□□□ 0.5
NOD1-202ENST00000411552 TRANK1O15050 2925 aa18.18■□□□□ 0.5
NOD1-202ENST00000411552 A0A087WZ62 844 aa18.18■□□□□ 0.5
NOD1-202ENST00000411552 CSDE1O75534 798 aaKnown RBP18.18■□□□□ 0.5
NOD1-202ENST00000411552 DGAT1O75907 488 aa18.18■□□□□ 0.5
NOD1-202ENST00000411552 BMP15O95972 392 aa18.18■□□□□ 0.5
NOD1-202ENST00000411552 HTRA4P83105 476 aaPredicted RBP18.18■□□□□ 0.5
NOD1-202ENST00000411552 LAMTOR4Q0VGL1 99 aa18.18■□□□□ 0.5
NOD1-202ENST00000411552 GRIN2CQ14957 1233 aa18.18■□□□□ 0.5
NOD1-202ENST00000411552 KRT79Q5XKE5 535 aa18.18■□□□□ 0.5
NOD1-202ENST00000411552 ZNF410Q86VK4 478 aa18.18■□□□□ 0.5
NOD1-202ENST00000411552 TCP11Q8WWU5 503 aa18.18■□□□□ 0.5
NOD1-202ENST00000411552 NLRP4Q96MN2 994 aa18.18■□□□□ 0.5
NOD1-202ENST00000411552 FDXACB1Q9BRP7 624 aaPredicted RBP18.18■□□□□ 0.5
NOD1-202ENST00000411552 MMTAG2Q9BU76 263 aaKnown RBP18.18■□□□□ 0.5
NOD1-202ENST00000411552 GCOM2Q9BZD3 368 aaPredicted RBP18.18■□□□□ 0.5
NOD1-202ENST00000411552 KIAA1024Q9UPX6 916 aa18.18■□□□□ 0.5
NOD1-202ENST00000411552 INSL6Q9Y581 213 aa18.18■□□□□ 0.5
NOD1-202ENST00000411552 CLIC4Q9Y696 253 aa18.18■□□□□ 0.5
NOD1-202ENST00000411552 USO1O60763 962 aaKnown RBP18.17■□□□□ 0.5
NOD1-202ENST00000411552 FGFR4P22455 802 aa18.17■□□□□ 0.5
NOD1-202ENST00000411552 TAP1Q03518 808 aa18.17■□□□□ 0.5
NOD1-202ENST00000411552 FAM43BQ6ZT52 329 aaPredicted RBP18.17■□□□□ 0.5
NOD1-202ENST00000411552 CDX2Q99626 313 aaPredicted RBP18.17■□□□□ 0.5
NOD1-202ENST00000411552 ADAM2Q99965 735 aa18.17■□□□□ 0.5
NOD1-202ENST00000411552 ZSCAN16Q9H4T2 348 aaPredicted RBP18.17■□□□□ 0.5
NOD1-202ENST00000411552 IFT122Q9HBG6 1241 aa18.17■□□□□ 0.5
NOD1-202ENST00000411552 DDX19AQ9NUU7 478 aaKnown RBP18.17■□□□□ 0.5
NOD1-202ENST00000411552 MYH15Q9Y2K3 1946 aa18.16■□□□□ 0.5
NOD1-202ENST00000411552 DENND3A2RUS2 1198 aa18.16■□□□□ 0.5
NOD1-202ENST00000411552 SRGAP2CP0DJJ0 459 aa18.16■□□□□ 0.5
NOD1-202ENST00000411552 DSC3Q14574 896 aa18.16■□□□□ 0.5
NOD1-202ENST00000411552 PADI6Q6TGC4 694 aa18.16■□□□□ 0.5
NOD1-202ENST00000411552 CRIPAKQ8N1N5 446 aa18.16■□□□□ 0.5
NOD1-202ENST00000411552 YME1L1Q96TA2 773 aa18.16■□□□□ 0.5
NOD1-202ENST00000411552 RGS18Q9NS28 235 aa18.16■□□□□ 0.5
NOD1-202ENST00000411552 EYSQ5T1H1 3165 aa18.16■□□□□ 0.5
NOD1-202ENST00000411552 ARHGEF35A5YM69 484 aa18.15■□□□□ 0.5
NOD1-202ENST00000411552 ASAP2O43150 1006 aa18.15■□□□□ 0.5
NOD1-202ENST00000411552 ARL2P36404 184 aa18.15■□□□□ 0.5
NOD1-202ENST00000411552 MXD4Q14582 209 aaPredicted RBP18.15■□□□□ 0.5
NOD1-202ENST00000411552 PTPAQ15257 358 aa18.15■□□□□ 0.5
NOD1-202ENST00000411552 SPRED2Q7Z698 418 aa18.15■□□□□ 0.5
NOD1-202ENST00000411552 ASAP3Q8TDY4 903 aa18.15■□□□□ 0.5
NOD1-202ENST00000411552 MYLIPQ8WY64 445 aa18.15■□□□□ 0.5
NOD1-202ENST00000411552 BHMT2Q9H2M3 363 aa18.15■□□□□ 0.5
NOD1-202ENST00000411552 PRDM12Q9H4Q4 367 aa18.15■□□□□ 0.5
NOD1-202ENST00000411552 GPRC5CQ9NQ84 441 aa18.15■□□□□ 0.5
NOD1-202ENST00000411552 LINC01553A4QN01 128 aa18.14■□□□□ 0.49
NOD1-202ENST00000411552 C9IYK1 514 aa18.14■□□□□ 0.49
NOD1-202ENST00000411552 SFPQP23246 707 aaKnown RBP eCLIP18.14■□□□□ 0.49
NOD1-202ENST00000411552 SARSP49591 514 aaKnown RBP18.14■□□□□ 0.49
NOD1-202ENST00000411552 CEBPZQ03701 1054 aaKnown RBP18.14■□□□□ 0.49
NOD1-202ENST00000411552 GRIN1Q05586 938 aa18.14■□□□□ 0.49
NOD1-202ENST00000411552 ZRSR1Q15695 479 aaKnown RBP18.14■□□□□ 0.49
NOD1-202ENST00000411552 FOXD4L5Q5VV16 416 aaPredicted RBP18.14■□□□□ 0.49
NOD1-202ENST00000411552 SLC24A5Q71RS6 500 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms