RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 ZBTB7CA1YPR0 619 aa-0.64□□□□□ -2.51
RNU4-88P-201ENST00000411220 ZBTB39O15060 712 aa-0.64□□□□□ -2.51
RNU4-88P-201ENST00000411220 SGSM2O43147 1006 aa-0.64□□□□□ -2.51
RNU4-88P-201ENST00000411220 SIGLEC6O43699 453 aa-0.64□□□□□ -2.51
RNU4-88P-201ENST00000411220 NDUFA10O95299 355 aa-0.64□□□□□ -2.51
RNU4-88P-201ENST00000411220 NFATC1O95644 943 aa-0.64□□□□□ -2.51
RNU4-88P-201ENST00000411220 TOMM40O96008 361 aa-0.64□□□□□ -2.51
RNU4-88P-201ENST00000411220 FGBP02675 491 aa-0.64□□□□□ -2.51
RNU4-88P-201ENST00000411220 NTRK1P04629 796 aa-0.64□□□□□ -2.51
RNU4-88P-201ENST00000411220 HNRNPLP14866 589 aaKnown RBP eCLIP-0.64□□□□□ -2.51
RNU4-88P-201ENST00000411220 WEE1P30291 646 aa-0.64□□□□□ -2.51
RNU4-88P-201ENST00000411220 BMPR1AP36894 532 aa-0.64□□□□□ -2.51
RNU4-88P-201ENST00000411220 KRTAP12-3P60328 96 aa-0.64□□□□□ -2.51
RNU4-88P-201ENST00000411220 FAM189BP81408 668 aa-0.64□□□□□ -2.51
RNU4-88P-201ENST00000411220 MRPS35P82673 323 aaKnown RBP-0.64□□□□□ -2.51
RNU4-88P-201ENST00000411220 PHF19Q5T6S3 580 aa-0.64□□□□□ -2.51
RNU4-88P-201ENST00000411220 KIAA0319Q5VV43 1072 aa-0.64□□□□□ -2.51
RNU4-88P-201ENST00000411220 E4F1Q66K89 784 aaPredicted RBP-0.64□□□□□ -2.51
RNU4-88P-201ENST00000411220 NAIF1Q69YI7 327 aaPredicted RBP-0.64□□□□□ -2.51
RNU4-88P-201ENST00000411220 RSRC2Q7L4I2 434 aaKnown RBP-0.64□□□□□ -2.51
RNU4-88P-201ENST00000411220 KRTAP11-1Q8IUC1 163 aa-0.64□□□□□ -2.51
RNU4-88P-201ENST00000411220 SYT12Q8IV01 421 aa-0.64□□□□□ -2.51
RNU4-88P-201ENST00000411220 MCATQ8IVS2 390 aaKnown RBP-0.64□□□□□ -2.51
RNU4-88P-201ENST00000411220 RGS22Q8NE09 1264 aa-0.64□□□□□ -2.51
RNU4-88P-201ENST00000411220 GRIN3AQ8TCU5 1115 aa-0.64□□□□□ -2.51
RNU4-88P-201ENST00000411220 ACTRT2Q8TDY3 377 aa-0.64□□□□□ -2.51
RNU4-88P-201ENST00000411220 TOE1Q96GM8 510 aaKnown RBP-0.64□□□□□ -2.51
RNU4-88P-201ENST00000411220 ABCB6Q9NP58 842 aa-0.64□□□□□ -2.51
RNU4-88P-201ENST00000411220 FOXD3Q9UJU5 478 aaPredicted RBP-0.64□□□□□ -2.51
RNU4-88P-201ENST00000411220 WASF3Q9UPY6 502 aa-0.64□□□□□ -2.51
RNU4-88P-201ENST00000411220 WNT6Q9Y6F9 365 aa-0.64□□□□□ -2.51
RNU4-88P-201ENST00000411220 STARD9Q9P2P6 4700 aa-0.64□□□□□ -2.51
RNU4-88P-201ENST00000411220 IGSF10Q6WRI0 2623 aa-0.65□□□□□ -2.51
RNU4-88P-201ENST00000411220 LY6G6EA0A0G2JKS1 128 aa-0.65□□□□□ -2.51
RNU4-88P-201ENST00000411220 A0A1W2PRX2 142 aa-0.65□□□□□ -2.51
RNU4-88P-201ENST00000411220 AHRRA9YTQ3 701 aa-0.65□□□□□ -2.51
RNU4-88P-201ENST00000411220 RNASET2O00584 256 aaKnown RBP-0.65□□□□□ -2.51
RNU4-88P-201ENST00000411220 FOXH1O75593 365 aa-0.65□□□□□ -2.51
RNU4-88P-201ENST00000411220 ABLIM3O94929 683 aa-0.65□□□□□ -2.51
RNU4-88P-201ENST00000411220 GSTM1P09488 218 aa-0.65□□□□□ -2.51
RNU4-88P-201ENST00000411220 RNF224P0DH78 156 aa-0.65□□□□□ -2.51
RNU4-88P-201ENST00000411220 IL6STP40189 918 aaPredicted RBP-0.65□□□□□ -2.51
RNU4-88P-201ENST00000411220 CRIP2P52943 208 aaPredicted RBP-0.65□□□□□ -2.51
RNU4-88P-201ENST00000411220 TFF2Q03403 129 aa-0.65□□□□□ -2.51
RNU4-88P-201ENST00000411220 DDB1Q16531 1140 aa-0.65□□□□□ -2.51
RNU4-88P-201ENST00000411220 USP17L6PQ6QN14 398 aa-0.65□□□□□ -2.51
RNU4-88P-201ENST00000411220 TEPPQ6URK8 271 aa-0.65□□□□□ -2.51
RNU4-88P-201ENST00000411220 ZNF66Q6ZN08 573 aa-0.65□□□□□ -2.51
RNU4-88P-201ENST00000411220 Q6ZNX1 250 aa-0.65□□□□□ -2.51
RNU4-88P-201ENST00000411220 MILR1Q7Z6M3 343 aa-0.65□□□□□ -2.51
RNU4-88P-201ENST00000411220 GTSCR1Q86UQ5 136 aa-0.65□□□□□ -2.51
RNU4-88P-201ENST00000411220 ABTB2Q8N961 1025 aa-0.65□□□□□ -2.51
RNU4-88P-201ENST00000411220 MICAL1Q8TDZ2 1067 aa-0.65□□□□□ -2.51
RNU4-88P-201ENST00000411220 PIGOQ8TEQ8 1089 aa-0.65□□□□□ -2.51
RNU4-88P-201ENST00000411220 NKD2Q969F2 451 aaPredicted RBP-0.65□□□□□ -2.51
RNU4-88P-201ENST00000411220 ZNF512Q96ME7 567 aaPredicted RBP-0.65□□□□□ -2.51
RNU4-88P-201ENST00000411220 CAMK1GQ96NX5 476 aa-0.65□□□□□ -2.51
RNU4-88P-201ENST00000411220 EHD4Q9H223 541 aa-0.65□□□□□ -2.51
RNU4-88P-201ENST00000411220 NCKIPSDQ9NZQ3 722 aa-0.65□□□□□ -2.51
RNU4-88P-201ENST00000411220 ZNF282Q9UDV7 671 aaPredicted RBP-0.65□□□□□ -2.51
RNU4-88P-201ENST00000411220 ENTPD2Q9Y5L3 495 aa-0.65□□□□□ -2.51
RNU4-88P-201ENST00000411220 SNCAIPQ9Y6H5 919 aa-0.65□□□□□ -2.51
RNU4-88P-201ENST00000411220 LRP2P98164 4655 aa-0.65□□□□□ -2.51
RNU4-88P-201ENST00000411220 HRNRQ86YZ3 2850 aaPredicted RBP-0.65□□□□□ -2.51
RNU4-88P-201ENST00000411220 SORL1Q92673 2214 aa-0.65□□□□□ -2.51
RNU4-88P-201ENST00000411220 COL6A6A6NMZ7 2263 aa-0.66□□□□□ -2.51
RNU4-88P-201ENST00000411220 FLNCQ14315 2725 aa-0.66□□□□□ -2.52
RNU4-88P-201ENST00000411220 GAGE12BA1L429 117 aa-0.66□□□□□ -2.52
RNU4-88P-201ENST00000411220 GAGE12HA6NDE8 117 aa-0.66□□□□□ -2.52
RNU4-88P-201ENST00000411220 UNC119BA6NIH7 251 aa-0.66□□□□□ -2.52
RNU4-88P-201ENST00000411220 FGF10O15520 208 aaPredicted RBP-0.66□□□□□ -2.52
RNU4-88P-201ENST00000411220 TBC1D8O95759 1140 aa-0.66□□□□□ -2.52
RNU4-88P-201ENST00000411220 PGRP06401 933 aa-0.66□□□□□ -2.52
RNU4-88P-201ENST00000411220 ITGAMP11215 1152 aa-0.66□□□□□ -2.52
RNU4-88P-201ENST00000411220 FDXRP22570 491 aa-0.66□□□□□ -2.52
RNU4-88P-201ENST00000411220 MT4P47944 62 aa-0.66□□□□□ -2.52
RNU4-88P-201ENST00000411220 EWSR1Q01844 656 aaKnown RBP eCLIP-0.66□□□□□ -2.52
RNU4-88P-201ENST00000411220 TOP3AQ13472 1001 aaPredicted RBP-0.66□□□□□ -2.52
RNU4-88P-201ENST00000411220 SEMA5AQ13591 1074 aa-0.66□□□□□ -2.52
RNU4-88P-201ENST00000411220 NAA30Q147X3 362 aaPredicted RBP-0.66□□□□□ -2.52
RNU4-88P-201ENST00000411220 KRT72Q14CN4 511 aa-0.66□□□□□ -2.52
RNU4-88P-201ENST00000411220 KRTAP6-3Q3LI67 103 aa-0.66□□□□□ -2.52
RNU4-88P-201ENST00000411220 KRTAP13-4Q3LI77 160 aa-0.66□□□□□ -2.52
RNU4-88P-201ENST00000411220 WIPI1Q5MNZ9 446 aaPredicted RBP-0.66□□□□□ -2.52
RNU4-88P-201ENST00000411220 GPR157Q5UAW9 335 aa-0.66□□□□□ -2.52
RNU4-88P-201ENST00000411220 CLEC14AQ86T13 490 aa-0.66□□□□□ -2.52
RNU4-88P-201ENST00000411220 GALNT12Q8IXK2 581 aa-0.66□□□□□ -2.52
RNU4-88P-201ENST00000411220 WDSUB1Q8N9V3 476 aa-0.66□□□□□ -2.52
RNU4-88P-201ENST00000411220 MTA3Q9BTC8 594 aa-0.66□□□□□ -2.52
RNU4-88P-201ENST00000411220 GSTO2Q9H4Y5 243 aa-0.66□□□□□ -2.52
RNU4-88P-201ENST00000411220 AKIP1Q9NQ31 210 aa-0.66□□□□□ -2.52
RNU4-88P-201ENST00000411220 RPS10P5Q9NQ39 176 aa-0.66□□□□□ -2.52
RNU4-88P-201ENST00000411220 GAR1Q9NY12 217 aaKnown RBP-0.66□□□□□ -2.52
RNU4-88P-201ENST00000411220 DTLQ9NZJ0 730 aa-0.66□□□□□ -2.52
RNU4-88P-201ENST00000411220 MINPP1Q9UNW1 487 aa-0.66□□□□□ -2.52
RNU4-88P-201ENST00000411220 SONP18583 2426 aaKnown RBP-0.66□□□□□ -2.52
RNU4-88P-201ENST00000411220 SETD2Q9BYW2 2564 aaPredicted RBP-0.66□□□□□ -2.52
RNU4-88P-201ENST00000411220 KMT2AQ03164 3969 aa-0.66□□□□□ -2.52
RNU4-88P-201ENST00000411220 TMEM238LA0A1B0GVL6 79 aa-0.67□□□□□ -2.52
RNU4-88P-201ENST00000411220 APBB1O00213 710 aa-0.67□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms