RNA–Protein interactions for RNA: ENST00000409954.6

MCF2L-210, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-210ENST00000409954 ARIH1Q9Y4X5 557 aaPredicted RBP16.33■□□□□ 0.2
MCF2L-210ENST00000409954 A0A0U1RQF3 1178 aa16.32■□□□□ 0.2
MCF2L-210ENST00000409954 DDX11L8A8MPP1 907 aa16.32■□□□□ 0.2
MCF2L-210ENST00000409954 PFKFB2O60825 505 aa16.32■□□□□ 0.2
MCF2L-210ENST00000409954 TDP2O95551 362 aa16.32■□□□□ 0.2
MCF2L-210ENST00000409954 LAG3P18627 525 aa16.32■□□□□ 0.2
MCF2L-210ENST00000409954 COL4A4P53420 1690 aaPredicted RBP16.32■□□□□ 0.2
MCF2L-210ENST00000409954 PSMC5P62195 406 aa16.32■□□□□ 0.2
MCF2L-210ENST00000409954 SCRN1Q12765 414 aa16.32■□□□□ 0.2
MCF2L-210ENST00000409954 SMAD2Q15796 467 aaKnown RBP16.32■□□□□ 0.2
MCF2L-210ENST00000409954 UGCGQ16739 394 aa16.32■□□□□ 0.2
MCF2L-210ENST00000409954 INF2Q27J81 1249 aa16.32■□□□□ 0.2
MCF2L-210ENST00000409954 ADHFE1Q8IWW8 467 aa16.32■□□□□ 0.2
MCF2L-210ENST00000409954 ABI1Q8IZP0 508 aa16.32■□□□□ 0.2
MCF2L-210ENST00000409954 ETNPPLQ8TBG4 499 aa16.32■□□□□ 0.2
MCF2L-210ENST00000409954 NLRP7Q8WX94 980 aa16.32■□□□□ 0.2
MCF2L-210ENST00000409954 RSPH1Q8WYR4 309 aa16.32■□□□□ 0.2
MCF2L-210ENST00000409954 SCLT1Q96NL6 688 aa16.32■□□□□ 0.2
MCF2L-210ENST00000409954 BRWD1Q9NSI6 2320 aa16.32■□□□□ 0.2
MCF2L-210ENST00000409954 PPP4R2Q9NY27 417 aa16.32■□□□□ 0.2
MCF2L-210ENST00000409954 KCNJ14Q9UNX9 436 aa16.32■□□□□ 0.2
MCF2L-210ENST00000409954 LZTS1Q9Y250 596 aa16.32■□□□□ 0.2
MCF2L-210ENST00000409954 STK36Q9NRP7 1315 aa16.31■□□□□ 0.2
MCF2L-210ENST00000409954 IGKV6-21A0A0C4DH24 114 aa16.31■□□□□ 0.2
MCF2L-210ENST00000409954 C19orf67A6NJJ6 358 aa16.31■□□□□ 0.2
MCF2L-210ENST00000409954 TBX3O15119 743 aa16.31■□□□□ 0.2
MCF2L-210ENST00000409954 MBTPS2O43462 519 aa16.31■□□□□ 0.2
MCF2L-210ENST00000409954 FGF18O76093 207 aa16.31■□□□□ 0.2
MCF2L-210ENST00000409954 STBD1O95210 358 aa16.31■□□□□ 0.2
MCF2L-210ENST00000409954 PLCB3Q01970 1234 aa16.31■□□□□ 0.2
MCF2L-210ENST00000409954 KRT17Q04695 432 aa16.31■□□□□ 0.2
MCF2L-210ENST00000409954 DLX2Q07687 328 aaPredicted RBP16.31■□□□□ 0.2
MCF2L-210ENST00000409954 LETM2Q2VYF4 491 aa16.31■□□□□ 0.2
MCF2L-210ENST00000409954 NEK8Q86SG6 692 aa16.31■□□□□ 0.2
MCF2L-210ENST00000409954 ECHDC2Q86YB7 292 aa16.31■□□□□ 0.2
MCF2L-210ENST00000409954 THNSL1Q8IYQ7 743 aa16.31■□□□□ 0.2
MCF2L-210ENST00000409954 KHSRPQ92945 711 aaKnown RBP eCLIP16.31■□□□□ 0.2
MCF2L-210ENST00000409954 GJA10Q969M2 543 aa16.31■□□□□ 0.2
MCF2L-210ENST00000409954 AIFM3Q96NN9 605 aa16.31■□□□□ 0.2
MCF2L-210ENST00000409954 CASD1Q96PB1 797 aa16.31■□□□□ 0.2
MCF2L-210ENST00000409954 POP1Q99575 1024 aaKnown RBP16.31■□□□□ 0.2
MCF2L-210ENST00000409954 CDCA3Q99618 268 aaPredicted RBP16.31■□□□□ 0.2
MCF2L-210ENST00000409954 TLE6Q9H808 572 aa16.31■□□□□ 0.2
MCF2L-210ENST00000409954 CD207Q9UJ71 328 aa16.31■□□□□ 0.2
MCF2L-210ENST00000409954 PPME1Q9Y570 386 aa16.31■□□□□ 0.2
MCF2L-210ENST00000409954 MARCH6O60337 910 aa16.3■□□□□ 0.2
MCF2L-210ENST00000409954 MAFO75444 373 aaPredicted RBP16.3■□□□□ 0.2
MCF2L-210ENST00000409954 EYA4O95677 639 aa16.3■□□□□ 0.2
MCF2L-210ENST00000409954 P4HBP07237 508 aaKnown RBP16.3■□□□□ 0.2
MCF2L-210ENST00000409954 FGFR1P11362 822 aa16.3■□□□□ 0.2
MCF2L-210ENST00000409954 SKIP12755 728 aa16.3■□□□□ 0.2
MCF2L-210ENST00000409954 IRS1P35568 1242 aa16.3■□□□□ 0.2
MCF2L-210ENST00000409954 QARSP47897 775 aaKnown RBP16.3■□□□□ 0.2
MCF2L-210ENST00000409954 NDUFV1P49821 464 aa16.3■□□□□ 0.2
MCF2L-210ENST00000409954 PPP2R5CQ13362 524 aa16.3■□□□□ 0.2
MCF2L-210ENST00000409954 SMAD4Q13485 552 aaKnown RBP16.3■□□□□ 0.2
MCF2L-210ENST00000409954 MTERF2Q49AM1 385 aa16.3■□□□□ 0.2
MCF2L-210ENST00000409954 ZNF410Q86VK4 478 aa16.3■□□□□ 0.2
MCF2L-210ENST00000409954 COLGALT1Q8NBJ5 622 aa16.3■□□□□ 0.2
MCF2L-210ENST00000409954 CEP89Q96ST8 783 aa16.3■□□□□ 0.2
MCF2L-210ENST00000409954 TRAIPQ9BWF2 469 aa16.3■□□□□ 0.2
MCF2L-210ENST00000409954 CWH43Q9H720 699 aa16.3■□□□□ 0.2
MCF2L-210ENST00000409954 KCNMB3Q9NPA1 279 aa16.3■□□□□ 0.2
MCF2L-210ENST00000409954 TLR9Q9NR96 1032 aa16.3■□□□□ 0.2
MCF2L-210ENST00000409954 SUCLA2Q9P2R7 463 aaPredicted RBP16.3■□□□□ 0.2
MCF2L-210ENST00000409954 SEPT9Q9UHD8 586 aaPredicted RBP16.3■□□□□ 0.2
MCF2L-210ENST00000409954 TPCN1Q9ULQ1 816 aa16.3■□□□□ 0.2
MCF2L-210ENST00000409954 XIRP2A4UGR9 3374 aa16.29■□□□□ 0.2
MCF2L-210ENST00000409954 MUC3AQ02505 3323 aa16.29■□□□□ 0.2
MCF2L-210ENST00000409954 CARNS1A5YM72 827 aa16.29■□□□□ 0.2
MCF2L-210ENST00000409954 BAG4O95429 457 aaKnown RBP16.29■□□□□ 0.2
MCF2L-210ENST00000409954 GTF2F1P35269 517 aaKnown RBP eCLIP16.29■□□□□ 0.22e-6■■■■□ 22.9
MCF2L-210ENST00000409954 PPM1AP35813 382 aa16.29■□□□□ 0.2
MCF2L-210ENST00000409954 NRIP1P48552 1158 aa16.29■□□□□ 0.2
MCF2L-210ENST00000409954 ZP2Q05996 745 aa16.29■□□□□ 0.2
MCF2L-210ENST00000409954 COASYQ13057 564 aa16.29■□□□□ 0.2
MCF2L-210ENST00000409954 OTUD6AQ7L8S5 288 aa16.29■□□□□ 0.2
MCF2L-210ENST00000409954 RBM23Q86U06 439 aaKnown RBP16.29■□□□□ 0.2
MCF2L-210ENST00000409954 MRPS27Q92552 414 aaKnown RBP16.29■□□□□ 0.2
MCF2L-210ENST00000409954 MSLNLQ96KJ4 702 aa16.29■□□□□ 0.2
MCF2L-210ENST00000409954 NGRNQ9NPE2 291 aaKnown RBP16.29■□□□□ 0.2
MCF2L-210ENST00000409954 ORC3Q9UBD5 711 aaPredicted RBP16.29■□□□□ 0.2
MCF2L-210ENST00000409954 RALGAPA2Q2PPJ7 1873 aa16.29■□□□□ 0.2
MCF2L-210ENST00000409954 MYO7AQ13402 2215 aa16.29■□□□□ 0.2
MCF2L-210ENST00000409954 LINC01565O15544 149 aa16.28■□□□□ 0.2
MCF2L-210ENST00000409954 CCNT1O60563 726 aaKnown RBP16.28■□□□□ 0.2
MCF2L-210ENST00000409954 SFPQP23246 707 aaKnown RBP eCLIP16.28■□□□□ 0.2
MCF2L-210ENST00000409954 EPHA7Q15375 998 aa16.28■□□□□ 0.2
MCF2L-210ENST00000409954 KCNT2Q6UVM3 1135 aa16.28■□□□□ 0.2
MCF2L-210ENST00000409954 ANO5Q75V66 913 aa16.28■□□□□ 0.2
MCF2L-210ENST00000409954 SLFN12Q8IYM2 578 aa16.28■□□□□ 0.2
MCF2L-210ENST00000409954 LRRC43Q8N309 656 aa16.28■□□□□ 0.2
MCF2L-210ENST00000409954 ZNF668Q96K58 619 aaPredicted RBP16.28■□□□□ 0.2
MCF2L-210ENST00000409954 ZNF558Q96NG5 402 aa16.28■□□□□ 0.2
MCF2L-210ENST00000409954 BRMS1Q9HCU9 246 aa16.28■□□□□ 0.2
MCF2L-210ENST00000409954 CYP26B1Q9NR63 512 aa16.28■□□□□ 0.2
MCF2L-210ENST00000409954 SPG21Q9NZD8 308 aa16.28■□□□□ 0.2
MCF2L-210ENST00000409954 A0A087WZ62 844 aa16.27■□□□□ 0.2
MCF2L-210ENST00000409954 PRR33A8MZF0 331 aa16.27■□□□□ 0.2
MCF2L-210ENST00000409954 ASAP2O43150 1006 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms