RNA–Protein interactions for RNA: ENST00000409894.7

POLR1B-203, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best) BASIC

Gene POLR1B, Length 4,457 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-203ENST00000409894 STRIP2Q9ULQ0 834 aa9.75□□□□□ -0.85
POLR1B-203ENST00000409894 ATP10AO60312 1499 aa9.75□□□□□ -0.85
POLR1B-203ENST00000409894 PRPSAP2O60256 369 aa9.74□□□□□ -0.85
POLR1B-203ENST00000409894 SLC16A2P36021 539 aa9.74□□□□□ -0.85
POLR1B-203ENST00000409894 CAV1Q03135 178 aa9.74□□□□□ -0.85
POLR1B-203ENST00000409894 ICA1Q05084 483 aa9.74□□□□□ -0.85
POLR1B-203ENST00000409894 PTGISQ16647 500 aa9.74□□□□□ -0.85
POLR1B-203ENST00000409894 METTL16Q86W50 562 aaKnown RBP9.74□□□□□ -0.85
POLR1B-203ENST00000409894 GIPC2Q8TF65 315 aa9.74□□□□□ -0.85
POLR1B-203ENST00000409894 C1orf54Q8WWF1 131 aa9.74□□□□□ -0.85
POLR1B-203ENST00000409894 MTBPQ96DY7 904 aa9.74□□□□□ -0.85
POLR1B-203ENST00000409894 L2HGDHQ9H9P8 463 aa9.74□□□□□ -0.85
POLR1B-203ENST00000409894 RBM12Q9NTZ6 932 aaKnown RBP9.74□□□□□ -0.85
POLR1B-203ENST00000409894 TBC1D23Q9NUY8 699 aa9.74□□□□□ -0.85
POLR1B-203ENST00000409894 DBR1Q9UK59 544 aaKnown RBP9.74□□□□□ -0.85
POLR1B-203ENST00000409894 MRPL11Q9Y3B7 192 aaKnown RBP9.74□□□□□ -0.85
POLR1B-203ENST00000409894 CCDC22O60826 627 aa9.74□□□□□ -0.85
POLR1B-203ENST00000409894 AGTP01019 485 aa9.74□□□□□ -0.85
POLR1B-203ENST00000409894 APOA1P02647 267 aa9.74□□□□□ -0.85
POLR1B-203ENST00000409894 SLC4A1P02730 911 aa9.74□□□□□ -0.85
POLR1B-203ENST00000409894 PCCAP05165 728 aaPredicted RBP9.74□□□□□ -0.85
POLR1B-203ENST00000409894 SCP2P22307 547 aa9.74□□□□□ -0.85
POLR1B-203ENST00000409894 TFAMQ00059 246 aaKnown RBP9.74□□□□□ -0.85
POLR1B-203ENST00000409894 PDIA2Q13087 525 aaKnown RBP9.74□□□□□ -0.85
POLR1B-203ENST00000409894 KLHL38Q2WGJ6 581 aa9.74□□□□□ -0.85
POLR1B-203ENST00000409894 OR6B2Q6IFH4 312 aa9.74□□□□□ -0.85
POLR1B-203ENST00000409894 DDX42Q86XP3 938 aaKnown RBP eCLIP9.74□□□□□ -0.85
POLR1B-203ENST00000409894 GLYCTKQ8IVS8 523 aa9.74□□□□□ -0.85
POLR1B-203ENST00000409894 C7orf31Q8N865 590 aa9.74□□□□□ -0.85
POLR1B-203ENST00000409894 AGR3Q8TD06 166 aa9.74□□□□□ -0.85
POLR1B-203ENST00000409894 ARL8AQ96BM9 186 aa9.74□□□□□ -0.85
POLR1B-203ENST00000409894 ADPGKQ9BRR6 497 aa9.74□□□□□ -0.85
POLR1B-203ENST00000409894 PICK1Q9NRD5 415 aa9.74□□□□□ -0.85
POLR1B-203ENST00000409894 GPS1Q13098 491 aa9.74□□□□□ -0.85
POLR1B-203ENST00000409894 PPP6R3Q5H9R7 873 aaPredicted RBP9.74□□□□□ -0.85
POLR1B-203ENST00000409894 PPP4R3CPQ6ZMV5 832 aa9.74□□□□□ -0.85
POLR1B-203ENST00000409894 HNRNPLLQ8WVV9 542 aaKnown RBP9.74□□□□□ -0.85
POLR1B-203ENST00000409894 PNKPQ96T60 521 aa9.74□□□□□ -0.85
POLR1B-203ENST00000409894 TRIM51Q9BSJ1 452 aa9.74□□□□□ -0.85
POLR1B-203ENST00000409894 NPHS2Q9NP85 383 aa9.74□□□□□ -0.85
POLR1B-203ENST00000409894 L3MBTL1Q9Y468 752 aa9.74□□□□□ -0.85
POLR1B-203ENST00000409894 SYCP2Q9BX26 1530 aa9.74□□□□□ -0.85
POLR1B-203ENST00000409894 A0A1W2PQC6 194 aa9.74□□□□□ -0.85
POLR1B-203ENST00000409894 POTEMA6NI47 508 aa9.74□□□□□ -0.85
POLR1B-203ENST00000409894 GFAPP14136 432 aa9.74□□□□□ -0.85
POLR1B-203ENST00000409894 ATP6V1B1P15313 513 aa9.74□□□□□ -0.85
POLR1B-203ENST00000409894 MAP4P27816 1152 aaKnown RBP9.74□□□□□ -0.85
POLR1B-203ENST00000409894 FMR1Q06787 632 aaKnown RBP eCLIP9.74□□□□□ -0.852e-7■■■■■ 26.8
POLR1B-203ENST00000409894 CHRNDQ07001 517 aa9.74□□□□□ -0.85
POLR1B-203ENST00000409894 FLOT2Q14254 428 aa9.74□□□□□ -0.85
POLR1B-203ENST00000409894 SMAD1Q15797 465 aaKnown RBP9.74□□□□□ -0.85
POLR1B-203ENST00000409894 CDO1Q16878 200 aa9.74□□□□□ -0.85
POLR1B-203ENST00000409894 ARHGEF16Q5VV41 709 aa9.74□□□□□ -0.85
POLR1B-203ENST00000409894 CATSPER3Q86XQ3 398 aa9.74□□□□□ -0.85
POLR1B-203ENST00000409894 CDC26Q8NHZ8 85 aa9.74□□□□□ -0.85
POLR1B-203ENST00000409894 SEPT8Q92599 483 aa9.74□□□□□ -0.85
POLR1B-203ENST00000409894 RBM17Q96I25 401 aaKnown RBP9.74□□□□□ -0.85
POLR1B-203ENST00000409894 C9orf72Q96LT7 481 aa9.74□□□□□ -0.85
POLR1B-203ENST00000409894 NACC1Q96RE7 527 aa9.74□□□□□ -0.85
POLR1B-203ENST00000409894 THTPAQ9BU02 230 aa9.74□□□□□ -0.85
POLR1B-203ENST00000409894 WWP1Q9H0M0 922 aa9.74□□□□□ -0.85
POLR1B-203ENST00000409894 FAM96AQ9H5X1 160 aa9.74□□□□□ -0.85
POLR1B-203ENST00000409894 TMEM206Q9H813 350 aa9.74□□□□□ -0.85
POLR1B-203ENST00000409894 KMT5AQ9NQR1 393 aa9.74□□□□□ -0.85
POLR1B-203ENST00000409894 GTSE1Q9NYZ3 720 aa9.74□□□□□ -0.85
POLR1B-203ENST00000409894 RAPGEF6Q8TEU7 1601 aa9.73□□□□□ -0.85
POLR1B-203ENST00000409894 TCOF1Q13428 1488 aaKnown RBP9.73□□□□□ -0.85
POLR1B-203ENST00000409894 ADCY3O60266 1144 aa9.73□□□□□ -0.85
POLR1B-203ENST00000409894 ANP32DO95626 131 aa9.73□□□□□ -0.85
POLR1B-203ENST00000409894 KRT4P19013 534 aa9.73□□□□□ -0.85
POLR1B-203ENST00000409894 CCDC85BQ15834 202 aaPredicted RBP9.73□□□□□ -0.85
POLR1B-203ENST00000409894 ZNF394Q53GI3 561 aa9.73□□□□□ -0.85
POLR1B-203ENST00000409894 TAF1BQ53T94 588 aaPredicted RBP9.73□□□□□ -0.85
POLR1B-203ENST00000409894 GPATCH4Q5T3I0 446 aaKnown RBP9.73□□□□□ -0.85
POLR1B-203ENST00000409894 TEDDM1Q5T9Z0 273 aa9.73□□□□□ -0.85
POLR1B-203ENST00000409894 SPICE1Q8N0Z3 855 aa9.73□□□□□ -0.85
POLR1B-203ENST00000409894 TEX9Q8N6V9 391 aa9.73□□□□□ -0.85
POLR1B-203ENST00000409894 MYCBPAPQ8TBZ2 947 aa9.73□□□□□ -0.85
POLR1B-203ENST00000409894 NCLNQ969V3 563 aa9.73□□□□□ -0.85
POLR1B-203ENST00000409894 TRABDQ9H4I3 376 aa9.73□□□□□ -0.85
POLR1B-203ENST00000409894 SLC38A10Q9HBR0 1119 aa9.73□□□□□ -0.85
POLR1B-203ENST00000409894 USP21Q9UK80 565 aa9.73□□□□□ -0.85
POLR1B-203ENST00000409894 NOD1Q9Y239 953 aa9.73□□□□□ -0.85
POLR1B-203ENST00000409894 KDM5DQ9BY66 1539 aa9.73□□□□□ -0.85
POLR1B-203ENST00000409894 A0A1B0GTH6 734 aa9.73□□□□□ -0.85
POLR1B-203ENST00000409894 SPDYE2BA6NHP3 402 aa9.73□□□□□ -0.85
POLR1B-203ENST00000409894 CDH16O75309 829 aa9.73□□□□□ -0.85
POLR1B-203ENST00000409894 FTLP02792 175 aaPredicted RBP9.73□□□□□ -0.85
POLR1B-203ENST00000409894 SPDYE6P0CI01 402 aa9.73□□□□□ -0.85
POLR1B-203ENST00000409894 SRGAP2BP0DMP2 458 aa9.73□□□□□ -0.85
POLR1B-203ENST00000409894 MYBL1P10243 752 aa9.73□□□□□ -0.85
POLR1B-203ENST00000409894 NPR1P16066 1061 aa9.73□□□□□ -0.85
POLR1B-203ENST00000409894 BTDP43251 543 aa9.73□□□□□ -0.85
POLR1B-203ENST00000409894 HDAC4P56524 1084 aa9.73□□□□□ -0.85
POLR1B-203ENST00000409894 UBE2SQ16763 222 aa9.73□□□□□ -0.85
POLR1B-203ENST00000409894 LONRF1Q17RB8 773 aa9.73□□□□□ -0.85
POLR1B-203ENST00000409894 CERKLQ49MI3 558 aaPredicted RBP9.73□□□□□ -0.85
POLR1B-203ENST00000409894 KCTD1Q719H9 257 aa9.73□□□□□ -0.85
POLR1B-203ENST00000409894 C4orf33Q8N1A6 199 aa9.73□□□□□ -0.85
POLR1B-203ENST00000409894 MDM1Q8TC05 714 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms