RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 TRIM59Q8IWR1 403 aa6.08□□□□□ -1.44
EPHA4-202ENST00000409854 CNPY4Q8N129 248 aa6.08□□□□□ -1.44
EPHA4-202ENST00000409854 TC2NQ8N9U0 490 aa6.08□□□□□ -1.44
EPHA4-202ENST00000409854 NPLOC4Q8TAT6 608 aa6.08□□□□□ -1.44
EPHA4-202ENST00000409854 FAM167AQ96KS9 214 aa6.08□□□□□ -1.44
EPHA4-202ENST00000409854 CCDC43Q96MW1 224 aaKnown RBP6.08□□□□□ -1.44
EPHA4-202ENST00000409854 ERGIC2Q96RQ1 377 aa6.08□□□□□ -1.44
EPHA4-202ENST00000409854 MLXIPQ9HAP2 919 aa6.08□□□□□ -1.44
EPHA4-202ENST00000409854 ATP6V0A4Q9HBG4 840 aa6.08□□□□□ -1.44
EPHA4-202ENST00000409854 POLD4Q9HCU8 107 aa6.08□□□□□ -1.44
EPHA4-202ENST00000409854 PDGFCQ9NRA1 345 aa6.08□□□□□ -1.44
EPHA4-202ENST00000409854 KCND1Q9NSA2 647 aa6.08□□□□□ -1.44
EPHA4-202ENST00000409854 DMAC2Q9NW81 257 aa6.08□□□□□ -1.44
EPHA4-202ENST00000409854 PYCARDQ9ULZ3 195 aa6.08□□□□□ -1.44
EPHA4-202ENST00000409854 PCDHB13Q9Y5F0 798 aa6.08□□□□□ -1.44
EPHA4-202ENST00000409854 EVPLQ92817 2033 aa6.08□□□□□ -1.44
EPHA4-202ENST00000409854 SORBS3O60504 671 aa6.07□□□□□ -1.44
EPHA4-202ENST00000409854 NR3C1P04150 777 aa6.07□□□□□ -1.44
EPHA4-202ENST00000409854 TXNP10599 105 aaKnown RBP6.07□□□□□ -1.44
EPHA4-202ENST00000409854 HOXD8P13378 290 aaPredicted RBP6.07□□□□□ -1.44
EPHA4-202ENST00000409854 RFC5P40937 340 aa6.07□□□□□ -1.44
EPHA4-202ENST00000409854 SLC26A2P50443 739 aa6.07□□□□□ -1.44
EPHA4-202ENST00000409854 STAT5BP51692 787 aa6.07□□□□□ -1.44
EPHA4-202ENST00000409854 MCCD1P59942 119 aaPredicted RBP6.07□□□□□ -1.44
EPHA4-202ENST00000409854 SNRPFP62306 86 aaKnown RBP6.07□□□□□ -1.44
EPHA4-202ENST00000409854 MAP2K5Q13163 448 aa6.07□□□□□ -1.44
EPHA4-202ENST00000409854 PTPN21Q16825 1174 aa6.07□□□□□ -1.44
EPHA4-202ENST00000409854 VWA3BQ502W6 1294 aa6.07□□□□□ -1.44
EPHA4-202ENST00000409854 ZC2HC1CQ53FD0 456 aaPredicted RBP6.07□□□□□ -1.44
EPHA4-202ENST00000409854 C12orf56Q8IXR9 622 aa6.07□□□□□ -1.44
EPHA4-202ENST00000409854 SH2D3AQ9BRG2 576 aa6.07□□□□□ -1.44
EPHA4-202ENST00000409854 TINF2Q9BSI4 451 aa6.07□□□□□ -1.44
EPHA4-202ENST00000409854 CGNQ9P2M7 1197 aaKnown RBP6.07□□□□□ -1.44
EPHA4-202ENST00000409854 KAT6AQ92794 2004 aa6.07□□□□□ -1.44
EPHA4-202ENST00000409854 K7ENM7 598 aa6.07□□□□□ -1.44
EPHA4-202ENST00000409854 CETN3O15182 167 aa6.07□□□□□ -1.44
EPHA4-202ENST00000409854 GYPCP04921 128 aa6.07□□□□□ -1.44
EPHA4-202ENST00000409854 SCP2P22307 547 aa6.07□□□□□ -1.44
EPHA4-202ENST00000409854 SFPQP23246 707 aaKnown RBP eCLIP6.07□□□□□ -1.44
EPHA4-202ENST00000409854 NR2F2P24468 414 aa6.07□□□□□ -1.44
EPHA4-202ENST00000409854 MTIF2P46199 727 aaKnown RBP6.07□□□□□ -1.44
EPHA4-202ENST00000409854 UBXN1Q04323 297 aa6.07□□□□□ -1.44
EPHA4-202ENST00000409854 ADAM9Q13443 819 aa6.07□□□□□ -1.44
EPHA4-202ENST00000409854 EMC2Q15006 297 aa6.07□□□□□ -1.44
EPHA4-202ENST00000409854 FIGNQ5HY92 759 aa6.07□□□□□ -1.44
EPHA4-202ENST00000409854 TMEM63BQ5T3F8 832 aa6.07□□□□□ -1.44
EPHA4-202ENST00000409854 CEP135Q66GS9 1140 aa6.07□□□□□ -1.44
EPHA4-202ENST00000409854 FRMD5Q7Z6J6 570 aa6.07□□□□□ -1.44
EPHA4-202ENST00000409854 DPP9Q86TI2 863 aa6.07□□□□□ -1.44
EPHA4-202ENST00000409854 CCDC112Q8NEF3 446 aa6.07□□□□□ -1.44
EPHA4-202ENST00000409854 GOLGA5Q8TBA6 731 aa6.07□□□□□ -1.44
EPHA4-202ENST00000409854 BSNDQ8WZ55 320 aa6.07□□□□□ -1.44
EPHA4-202ENST00000409854 BORCS6Q96GS4 357 aa6.07□□□□□ -1.44
EPHA4-202ENST00000409854 MKNK1Q9BUB5 465 aa6.07□□□□□ -1.44
EPHA4-202ENST00000409854 NOC4LQ9BVI4 516 aaKnown RBP6.07□□□□□ -1.44
EPHA4-202ENST00000409854 TTYH3Q9C0H2 523 aa6.07□□□□□ -1.44
EPHA4-202ENST00000409854 ABHD16BQ9H3Z7 469 aa6.07□□□□□ -1.44
EPHA4-202ENST00000409854 TMEM206Q9H813 350 aa6.07□□□□□ -1.44
EPHA4-202ENST00000409854 ZFYVE28Q9HCC9 887 aa6.07□□□□□ -1.44
EPHA4-202ENST00000409854 GPRC5CQ9NQ84 441 aa6.07□□□□□ -1.44
EPHA4-202ENST00000409854 SPTLC3Q9NUV7 552 aa6.07□□□□□ -1.44
EPHA4-202ENST00000409854 SLC5A4Q9NY91 659 aa6.07□□□□□ -1.44
EPHA4-202ENST00000409854 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.07□□□□□ -1.44
EPHA4-202ENST00000409854 ANK1P16157 1881 aa6.07□□□□□ -1.44
EPHA4-202ENST00000409854 ZBTB42B2RXF5 422 aa6.06□□□□□ -1.44
EPHA4-202ENST00000409854 MFAP3LO75121 409 aa6.06□□□□□ -1.44
EPHA4-202ENST00000409854 TOMM70O94826 608 aa6.06□□□□□ -1.44
EPHA4-202ENST00000409854 RPL13P26373 211 aaKnown RBP6.06□□□□□ -1.44
EPHA4-202ENST00000409854 ABCD1P33897 745 aa6.06□□□□□ -1.44
EPHA4-202ENST00000409854 NPTX2P47972 431 aa6.06□□□□□ -1.44
EPHA4-202ENST00000409854 SLC20A2Q08357 652 aa6.06□□□□□ -1.44
EPHA4-202ENST00000409854 CRHR2Q13324 411 aa6.06□□□□□ -1.44
EPHA4-202ENST00000409854 LAMC2Q13753 1193 aa6.06□□□□□ -1.44
EPHA4-202ENST00000409854 FAM102BQ5T8I3 360 aa6.06□□□□□ -1.44
EPHA4-202ENST00000409854 HAUS6Q7Z4H7 955 aa6.06□□□□□ -1.44
EPHA4-202ENST00000409854 TMEM161BQ8NDZ6 487 aa6.06□□□□□ -1.44
EPHA4-202ENST00000409854 PPTC7Q8NI37 304 aa6.06□□□□□ -1.44
EPHA4-202ENST00000409854 COPS5Q92905 334 aa6.06□□□□□ -1.44
EPHA4-202ENST00000409854 EEF2KMTQ96G04 330 aa6.06□□□□□ -1.44
EPHA4-202ENST00000409854 SPATA33Q96N06 139 aa6.06□□□□□ -1.44
EPHA4-202ENST00000409854 PANX2Q96RD6 677 aa6.06□□□□□ -1.44
EPHA4-202ENST00000409854 NDST4Q9H3R1 872 aa6.06□□□□□ -1.44
EPHA4-202ENST00000409854 AGPAT3Q9NRZ7 376 aa6.06□□□□□ -1.44
EPHA4-202ENST00000409854 NRBP2Q9NSY0 501 aa6.06□□□□□ -1.44
EPHA4-202ENST00000409854 FAM184BQ9ULE4 1060 aa6.06□□□□□ -1.44
EPHA4-202ENST00000409854 SIK3Q9Y2K2 1263 aa6.06□□□□□ -1.44
EPHA4-202ENST00000409854 FRMPD3Q5JV73 1810 aa6.06□□□□□ -1.44
EPHA4-202ENST00000409854 IGKV6-21A0A0C4DH24 114 aa6.06□□□□□ -1.44
EPHA4-202ENST00000409854 RASSF10A6NK89 507 aa6.06□□□□□ -1.44
EPHA4-202ENST00000409854 CA12O43570 354 aa6.06□□□□□ -1.44
EPHA4-202ENST00000409854 MAFO75444 373 aaPredicted RBP6.06□□□□□ -1.44
EPHA4-202ENST00000409854 GH1P01241 217 aa6.06□□□□□ -1.44
EPHA4-202ENST00000409854 CLCN1P35523 988 aa6.06□□□□□ -1.44
EPHA4-202ENST00000409854 ARL2P36404 184 aa6.06□□□□□ -1.44
EPHA4-202ENST00000409854 PPP2R3AQ06190 1150 aa6.06□□□□□ -1.44
EPHA4-202ENST00000409854 RBL2Q08999 1139 aa6.06□□□□□ -1.44
EPHA4-202ENST00000409854 DMP1Q13316 513 aaPredicted RBP6.06□□□□□ -1.44
EPHA4-202ENST00000409854 MTERF2Q49AM1 385 aa6.06□□□□□ -1.44
EPHA4-202ENST00000409854 DUSP28Q4G0W2 176 aa6.06□□□□□ -1.44
EPHA4-202ENST00000409854 OLFML2BQ68BL8 750 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms