RNA–Protein interactions for RNA: ENST00000409777.5

CUL3-204, Transcript of cullin 3, humanhuman

TSL 1 (best) BASIC

Gene CUL3, Length 3,147 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-204ENST00000409777 SLMAPQ14BN4 828 aa3.43□□□□□ -1.86
CUL3-204ENST00000409777 SNCBQ16143 134 aa3.43□□□□□ -1.86
CUL3-204ENST00000409777 SLC9C1Q4G0N8 1177 aa3.43□□□□□ -1.86
CUL3-204ENST00000409777 SFMBT2Q5VUG0 894 aa3.43□□□□□ -1.86
CUL3-204ENST00000409777 DUPD1Q68J44 220 aa3.43□□□□□ -1.86
CUL3-204ENST00000409777 BTNL9Q6UXG8 535 aa3.43□□□□□ -1.86
CUL3-204ENST00000409777 BRINP3Q76B58 766 aa3.43□□□□□ -1.86
CUL3-204ENST00000409777 ASRGL1Q7L266 308 aa3.43□□□□□ -1.86
CUL3-204ENST00000409777 MIGA1Q8NAN2 632 aa3.43□□□□□ -1.86
CUL3-204ENST00000409777 TPCN2Q8NHX9 752 aa3.43□□□□□ -1.86
CUL3-204ENST00000409777 CRYGNQ8WXF5 182 aa3.43□□□□□ -1.86
CUL3-204ENST00000409777 ZNF622Q969S3 477 aaKnown RBP eCLIP3.43□□□□□ -1.86
CUL3-204ENST00000409777 CCDC47Q96A33 483 aaKnown RBP3.43□□□□□ -1.86
CUL3-204ENST00000409777 BUD13Q9BRD0 619 aaKnown RBP eCLIP3.43□□□□□ -1.862e-7■□□□□ 8.2
CUL3-204ENST00000409777 TINF2Q9BSI4 451 aa3.43□□□□□ -1.86
CUL3-204ENST00000409777 LRRC27Q9C0I9 530 aa3.43□□□□□ -1.86
CUL3-204ENST00000409777 TRAF3IP3Q9Y228 551 aa3.43□□□□□ -1.86
CUL3-204ENST00000409777 COL4A3BPQ9Y5P4 624 aa3.43□□□□□ -1.86
CUL3-204ENST00000409777 NRXN2Q9P2S2 1712 aa3.43□□□□□ -1.86
CUL3-204ENST00000409777 PITPNM2Q9BZ72 1349 aa3.43□□□□□ -1.86
CUL3-204ENST00000409777 CFAP73A6NFT4 308 aa3.43□□□□□ -1.86
CUL3-204ENST00000409777 CCT8L1PA6NM43 557 aa3.43□□□□□ -1.86
CUL3-204ENST00000409777 GCOM1H8Y6P7 765 aaPredicted RBP3.43□□□□□ -1.86
CUL3-204ENST00000409777 CLGNO14967 610 aa3.43□□□□□ -1.86
CUL3-204ENST00000409777 ATP6V1G2O95670 118 aa3.43□□□□□ -1.86
CUL3-204ENST00000409777 MYZAPP0CAP1 466 aa3.43□□□□□ -1.86
CUL3-204ENST00000409777 RASA1P20936 1047 aa3.43□□□□□ -1.86
CUL3-204ENST00000409777 PTGIRP43119 386 aa3.43□□□□□ -1.86
CUL3-204ENST00000409777 MNAT1P51948 309 aa3.43□□□□□ -1.86
CUL3-204ENST00000409777 RASSF7Q02833 373 aa3.43□□□□□ -1.86
CUL3-204ENST00000409777 MECOMQ03112 1051 aa3.43□□□□□ -1.86
CUL3-204ENST00000409777 MRPL58Q14197 206 aaKnown RBP3.43□□□□□ -1.86
CUL3-204ENST00000409777 CYP1B1Q16678 543 aa3.43□□□□□ -1.86
CUL3-204ENST00000409777 ZDHHC24Q6UX98 284 aa3.43□□□□□ -1.86
CUL3-204ENST00000409777 RRAGAQ7L523 313 aa3.43□□□□□ -1.86
CUL3-204ENST00000409777 NT5DC3Q86UY8 548 aa3.43□□□□□ -1.86
CUL3-204ENST00000409777 DZIP3Q86Y13 1208 aaKnown RBP3.43□□□□□ -1.86
CUL3-204ENST00000409777 COL23A1Q86Y22 540 aaPredicted RBP3.43□□□□□ -1.86
CUL3-204ENST00000409777 TEX11Q8IYF3 940 aa3.43□□□□□ -1.86
CUL3-204ENST00000409777 LARGE2Q8N3Y3 721 aa3.43□□□□□ -1.86
CUL3-204ENST00000409777 ANKS4BQ8N8V4 417 aa3.43□□□□□ -1.86
CUL3-204ENST00000409777 PNMA1Q8ND90 353 aa3.43□□□□□ -1.86
CUL3-204ENST00000409777 CCHCR1Q8TD31 782 aa3.43□□□□□ -1.86
CUL3-204ENST00000409777 SLCO2A1Q92959 643 aa3.43□□□□□ -1.86
CUL3-204ENST00000409777 CLP1Q92989 425 aaKnown RBP3.43□□□□□ -1.86
CUL3-204ENST00000409777 XPO6Q96QU8 1125 aaKnown RBP3.43□□□□□ -1.86
CUL3-204ENST00000409777 KRT12Q99456 494 aa3.43□□□□□ -1.86
CUL3-204ENST00000409777 PSMD1Q99460 953 aa3.43□□□□□ -1.86
CUL3-204ENST00000409777 JPH2Q9BR39 696 aaPredicted RBP3.43□□□□□ -1.86
CUL3-204ENST00000409777 MKNK2Q9HBH9 465 aa3.43□□□□□ -1.86
CUL3-204ENST00000409777 LRRC4CQ9HCJ2 640 aa3.43□□□□□ -1.86
CUL3-204ENST00000409777 BATF3Q9NR55 127 aa3.43□□□□□ -1.86
CUL3-204ENST00000409777 FAM114A2Q9NRY5 505 aa3.43□□□□□ -1.86
CUL3-204ENST00000409777 PRKAG3Q9UGI9 489 aa3.43□□□□□ -1.86
CUL3-204ENST00000409777 SEPT3Q9UH03 358 aa3.43□□□□□ -1.86
CUL3-204ENST00000409777 SUGT1Q9Y2Z0 365 aa3.43□□□□□ -1.86
CUL3-204ENST00000409777 CYP3A7-CYP3A51PA0A087WV96 503 aa3.42□□□□□ -1.86
CUL3-204ENST00000409777 CCDC194A0A1B0GVG4 234 aa3.42□□□□□ -1.86
CUL3-204ENST00000409777 SNAP23O00161 211 aa3.42□□□□□ -1.86
CUL3-204ENST00000409777 PGRMC1O00264 195 aaKnown RBP3.42□□□□□ -1.86
CUL3-204ENST00000409777 SART1O43290 800 aaKnown RBP3.42□□□□□ -1.86
CUL3-204ENST00000409777 AKR1B10O60218 316 aa3.42□□□□□ -1.86
CUL3-204ENST00000409777 TCEA3O75764 348 aa3.42□□□□□ -1.86
CUL3-204ENST00000409777 MTA2O94776 668 aa3.42□□□□□ -1.86
CUL3-204ENST00000409777 GJB6O95452 261 aa3.42□□□□□ -1.86
CUL3-204ENST00000409777 F12P00748 615 aaPredicted RBP3.42□□□□□ -1.86
CUL3-204ENST00000409777 CCNB1P14635 433 aa3.42□□□□□ -1.86
CUL3-204ENST00000409777 CYP3A7P24462 503 aa3.42□□□□□ -1.86
CUL3-204ENST00000409777 CXCR5P32302 372 aa3.42□□□□□ -1.86
CUL3-204ENST00000409777 HOXD13P35453 343 aa3.42□□□□□ -1.86
CUL3-204ENST00000409777 FLT3P36888 993 aa3.42□□□□□ -1.86
CUL3-204ENST00000409777 ATP1A2P50993 1020 aa3.42□□□□□ -1.86
CUL3-204ENST00000409777 ASIC1P78348 528 aa3.42□□□□□ -1.86
CUL3-204ENST00000409777 ARHGAP4P98171 946 aa3.42□□□□□ -1.86
CUL3-204ENST00000409777 FKBP3Q00688 224 aaKnown RBP3.42□□□□□ -1.86
CUL3-204ENST00000409777 CCDC15Q0P6D6 951 aa3.42□□□□□ -1.86
CUL3-204ENST00000409777 COASYQ13057 564 aa3.42□□□□□ -1.86
CUL3-204ENST00000409777 NONOQ15233 471 aaKnown RBP eCLIP3.42□□□□□ -1.86
CUL3-204ENST00000409777 EPHA7Q15375 998 aa3.42□□□□□ -1.86
CUL3-204ENST00000409777 CLUL1Q15846 466 aa3.42□□□□□ -1.86
CUL3-204ENST00000409777 PPP2R5EQ16537 467 aa3.42□□□□□ -1.86
CUL3-204ENST00000409777 INF2Q27J81 1249 aa3.42□□□□□ -1.86
CUL3-204ENST00000409777 SPDYAQ5MJ70 313 aa3.42□□□□□ -1.86
CUL3-204ENST00000409777 CEP85LQ5SZL2 805 aa3.42□□□□□ -1.86
CUL3-204ENST00000409777 CCDC181Q5TID7 509 aa3.42□□□□□ -1.86
CUL3-204ENST00000409777 DCAF12L1Q5VU92 463 aa3.42□□□□□ -1.86
CUL3-204ENST00000409777 TTC19Q6DKK2 380 aaPredicted RBP3.42□□□□□ -1.86
CUL3-204ENST00000409777 SV2BQ7L1I2 683 aa3.42□□□□□ -1.86
CUL3-204ENST00000409777 FRMD5Q7Z6J6 570 aa3.42□□□□□ -1.86
CUL3-204ENST00000409777 NEK8Q86SG6 692 aa3.42□□□□□ -1.86
CUL3-204ENST00000409777 METTL13Q8N6R0 699 aa3.42□□□□□ -1.86
CUL3-204ENST00000409777 RASSF8Q8NHQ8 419 aa3.42□□□□□ -1.86
CUL3-204ENST00000409777 LARP4BQ92615 738 aaKnown RBP3.42□□□□□ -1.86
CUL3-204ENST00000409777 GPKOWQ92917 476 aaPredicted RBP eCLIP3.42□□□□□ -1.865e-7■■□□□ 13
CUL3-204ENST00000409777 ACSBG1Q96GR2 724 aa3.42□□□□□ -1.86
CUL3-204ENST00000409777 CCDC85AQ96PX6 553 aaPredicted RBP3.42□□□□□ -1.86
CUL3-204ENST00000409777 RUFY1Q96T51 708 aa3.42□□□□□ -1.86
CUL3-204ENST00000409777 CRNKL1Q9BZJ0 848 aaKnown RBP3.42□□□□□ -1.86
CUL3-204ENST00000409777 LUC7LQ9NQ29 371 aaKnown RBP3.42□□□□□ -1.86
CUL3-204ENST00000409777 TOMM22Q9NS69 142 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms