RNA–Protein interactions for RNA: ENST00000409766.7

USP39-204, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-204ENST00000409766 ANKEF1Q9NU02 776 aa22.01■■□□□ 1.11
USP39-204ENST00000409766 MYPNQ86TC9 1320 aa22.01■■□□□ 1.11
USP39-204ENST00000409766 A0A087X0T9 212 aa22■■□□□ 1.11
USP39-204ENST00000409766 FAM228BP0C875 321 aa22■■□□□ 1.11
USP39-204ENST00000409766 JAM2P57087 298 aa22■■□□□ 1.11
USP39-204ENST00000409766 PLS1Q14651 629 aa22■■□□□ 1.11
USP39-204ENST00000409766 PPP2R5AQ15172 486 aa22■■□□□ 1.11
USP39-204ENST00000409766 SH3D19Q5HYK7 790 aa22■■□□□ 1.11
USP39-204ENST00000409766 RBM46Q8TBY0 533 aaKnown RBP22■■□□□ 1.11
USP39-204ENST00000409766 CCDC43Q96MW1 224 aaKnown RBP22■■□□□ 1.11
USP39-204ENST00000409766 ACAD9Q9H845 621 aa22■■□□□ 1.11
USP39-204ENST00000409766 A1CFQ9NQ94 594 aaKnown RBP22■■□□□ 1.11
USP39-204ENST00000409766 TCEAL9Q9UHQ7 104 aa22■■□□□ 1.11
USP39-204ENST00000409766 LOC285556D6RIA3 1793 aa21.99■■□□□ 1.11
USP39-204ENST00000409766 FMO5P49326 533 aa21.99■■□□□ 1.11
USP39-204ENST00000409766 PRKG1Q13976 671 aa21.99■■□□□ 1.11
USP39-204ENST00000409766 BMS1Q14692 1282 aaKnown RBP21.99■■□□□ 1.11
USP39-204ENST00000409766 CC2D1AQ6P1N0 951 aaPredicted RBP21.99■■□□□ 1.11
USP39-204ENST00000409766 RNF10Q8N5U6 811 aaKnown RBP21.99■■□□□ 1.11
USP39-204ENST00000409766 ANKRD13CQ8N6S4 541 aa21.99■■□□□ 1.11
USP39-204ENST00000409766 DRC1Q96MC2 740 aa21.99■■□□□ 1.11
USP39-204ENST00000409766 ST6GALNAC4Q9H4F1 302 aa21.99■■□□□ 1.11
USP39-204ENST00000409766 LUC7LQ9NQ29 371 aaKnown RBP21.99■■□□□ 1.11
USP39-204ENST00000409766 ADAMTS1Q9UHI8 967 aa21.99■■□□□ 1.11
USP39-204ENST00000409766 AJAP1Q9UKB5 411 aaPredicted RBP21.99■■□□□ 1.11
USP39-204ENST00000409766 PCDHA10Q9Y5I2 948 aa21.99■■□□□ 1.11
USP39-204ENST00000409766 BZW2Q9Y6E2 419 aaKnown RBP21.99■■□□□ 1.11
USP39-204ENST00000409766 POTEB2H3BUK9 544 aa21.99■■□□□ 1.11
USP39-204ENST00000409766 KCNA2P16389 499 aa21.99■■□□□ 1.11
USP39-204ENST00000409766 PTK2Q05397 1052 aa21.99■■□□□ 1.11
USP39-204ENST00000409766 NOA1Q8NC60 698 aaKnown RBP21.99■■□□□ 1.11
USP39-204ENST00000409766 MMS19Q96T76 1030 aa21.99■■□□□ 1.11
USP39-204ENST00000409766 MAF1Q9H063 256 aa21.99■■□□□ 1.11
USP39-204ENST00000409766 LCTP09848 1927 aa21.98■■□□□ 1.11
USP39-204ENST00000409766 PTPRFP10586 1907 aa21.98■■□□□ 1.11
USP39-204ENST00000409766 EXOC3O60645 756 aa21.98■■□□□ 1.11
USP39-204ENST00000409766 PRKCIP41743 596 aa21.98■■□□□ 1.11
USP39-204ENST00000409766 NPEPPSP55786 919 aa21.98■■□□□ 1.11
USP39-204ENST00000409766 GTF2BQ00403 316 aa21.98■■□□□ 1.11
USP39-204ENST00000409766 XKR9Q5GH70 373 aa21.98■■□□□ 1.11
USP39-204ENST00000409766 PLA2G4FQ68DD2 849 aa21.98■■□□□ 1.11
USP39-204ENST00000409766 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.98■■□□□ 1.11
USP39-204ENST00000409766 ANO5Q75V66 913 aa21.98■■□□□ 1.11
USP39-204ENST00000409766 ALS2CR12Q96Q35 445 aa21.98■■□□□ 1.11
USP39-204ENST00000409766 ACCSQ96QU6 501 aa21.98■■□□□ 1.11
USP39-204ENST00000409766 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP21.98■■□□□ 1.11
USP39-204ENST00000409766 RAB21Q9UL25 225 aa21.98■■□□□ 1.11
USP39-204ENST00000409766 SNX12Q9UMY4 172 aa21.98■■□□□ 1.11
USP39-204ENST00000409766 SNCAIPQ9Y6H5 919 aa21.98■■□□□ 1.11
USP39-204ENST00000409766 CCDC151A5D8V7 595 aa21.97■■□□□ 1.11
USP39-204ENST00000409766 ENOX2Q16206 610 aaKnown RBP21.97■■□□□ 1.11
USP39-204ENST00000409766 ZNF571Q7Z3V5 609 aaPredicted RBP21.97■■□□□ 1.11
USP39-204ENST00000409766 HAUS6Q7Z4H7 955 aa21.97■■□□□ 1.11
USP39-204ENST00000409766 C12orf56Q8IXR9 622 aa21.97■■□□□ 1.11
USP39-204ENST00000409766 GPRC5CQ9NQ84 441 aa21.97■■□□□ 1.11
USP39-204ENST00000409766 DOCK5Q9H7D0 1870 aa21.97■■□□□ 1.11
USP39-204ENST00000409766 SEC31AO94979 1220 aaKnown RBP21.97■■□□□ 1.11
USP39-204ENST00000409766 PNMA6AP0CW24 399 aaPredicted RBP21.97■■□□□ 1.11
USP39-204ENST00000409766 PRLRP16471 622 aa21.97■■□□□ 1.11
USP39-204ENST00000409766 BFSP1Q12934 665 aa21.97■■□□□ 1.11
USP39-204ENST00000409766 VGLL4Q14135 290 aa21.97■■□□□ 1.11
USP39-204ENST00000409766 BRD3Q15059 726 aa21.97■■□□□ 1.11
USP39-204ENST00000409766 CBWD6Q4V339 395 aa21.97■■□□□ 1.11
USP39-204ENST00000409766 CBWD3Q5JTY5 395 aa21.97■■□□□ 1.11
USP39-204ENST00000409766 CBWD5Q5RIA9 395 aa21.97■■□□□ 1.11
USP39-204ENST00000409766 IQCEQ6IPM2 695 aa21.97■■□□□ 1.11
USP39-204ENST00000409766 GJB7Q6PEY0 223 aa21.97■■□□□ 1.11
USP39-204ENST00000409766 TRMT1LQ7Z2T5 733 aaKnown RBP21.97■■□□□ 1.11
USP39-204ENST00000409766 SMAP1Q8IYB5 467 aaPredicted RBP21.97■■□□□ 1.11
USP39-204ENST00000409766 NOX5Q96PH1 765 aa21.97■■□□□ 1.11
USP39-204ENST00000409766 PNKPQ96T60 521 aa21.97■■□□□ 1.11
USP39-204ENST00000409766 ZNF185O15231 689 aa21.96■■□□□ 1.11
USP39-204ENST00000409766 STAM2O75886 525 aa21.96■■□□□ 1.11
USP39-204ENST00000409766 TRIM49P0CI25 452 aa21.96■■□□□ 1.11
USP39-204ENST00000409766 TRIM49CP0CI26 452 aa21.96■■□□□ 1.11
USP39-204ENST00000409766 NCKAP1LP55160 1127 aa21.96■■□□□ 1.11
USP39-204ENST00000409766 CKAP4Q07065 602 aaKnown RBP21.96■■□□□ 1.11
USP39-204ENST00000409766 NAB2Q15742 525 aa21.96■■□□□ 1.11
USP39-204ENST00000409766 CAPZA3Q96KX2 299 aa21.96■■□□□ 1.11
USP39-204ENST00000409766 NFASCO94856 1347 aa21.96■■□□□ 1.11
USP39-204ENST00000409766 TISP43B9A030 160 aa21.96■■□□□ 1.11
USP39-204ENST00000409766 ATP8B1O43520 1251 aa21.96■■□□□ 1.11
USP39-204ENST00000409766 DDNO94850 711 aaPredicted RBP21.96■■□□□ 1.11
USP39-204ENST00000409766 PEX3P56589 373 aa21.96■■□□□ 1.11
USP39-204ENST00000409766 DLK2Q6UY11 383 aa21.96■■□□□ 1.11
USP39-204ENST00000409766 KRT222Q8N1A0 295 aa21.96■■□□□ 1.11
USP39-204ENST00000409766 CDHR1Q96JP9 859 aa21.96■■□□□ 1.11
USP39-204ENST00000409766 RPGRIP1Q96KN7 1286 aa21.96■■□□□ 1.11
USP39-204ENST00000409766 ARFGAP3Q9NP61 516 aa21.96■■□□□ 1.11
USP39-204ENST00000409766 PAPPA2Q9BXP8 1791 aa21.95■■□□□ 1.1
USP39-204ENST00000409766 ZNF862O60290 1169 aa21.95■■□□□ 1.1
USP39-204ENST00000409766 STBD1O95210 358 aa21.95■■□□□ 1.1
USP39-204ENST00000409766 RHOXF2BP0C7M4 288 aa21.95■■□□□ 1.1
USP39-204ENST00000409766 C10orf76Q5T2E6 689 aa21.95■■□□□ 1.1
USP39-204ENST00000409766 FAM102BQ5T8I3 360 aa21.95■■□□□ 1.1
USP39-204ENST00000409766 RDH13Q8NBN7 331 aa21.95■■□□□ 1.1
USP39-204ENST00000409766 RHOXF2Q9BQY4 288 aa21.95■■□□□ 1.1
USP39-204ENST00000409766 GABBR1Q9UBS5 961 aa21.95■■□□□ 1.1
USP39-204ENST00000409766 ARID2Q68CP9 1835 aa21.95■■□□□ 1.1
USP39-204ENST00000409766 SLC16A4O15374 487 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms