RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-205ENST00000409542 F13A1P00488 732 aa14.36□□□□□ -0.11
CHRNA1-205ENST00000409542 ST3GAL1Q11201 340 aa14.36□□□□□ -0.11
CHRNA1-205ENST00000409542 ME3Q16798 604 aa14.36□□□□□ -0.11
CHRNA1-205ENST00000409542 WWC2Q6AWC2 1192 aa14.36□□□□□ -0.11
CHRNA1-205ENST00000409542 LRSAM1Q6UWE0 723 aa14.36□□□□□ -0.11
CHRNA1-205ENST00000409542 ABHD15Q6UXT9 468 aa14.36□□□□□ -0.11
CHRNA1-205ENST00000409542 TMTC3Q6ZXV5 915 aa14.36□□□□□ -0.11
CHRNA1-205ENST00000409542 SLC24A5Q71RS6 500 aa14.36□□□□□ -0.11
CHRNA1-205ENST00000409542 HEATR3Q7Z4Q2 680 aa14.36□□□□□ -0.11
CHRNA1-205ENST00000409542 CCDC60Q8IWA6 550 aaPredicted RBP14.36□□□□□ -0.11
CHRNA1-205ENST00000409542 RIPOR3Q96MK2 946 aa14.36□□□□□ -0.11
CHRNA1-205ENST00000409542 CDCA3Q99618 268 aaPredicted RBP14.36□□□□□ -0.11
CHRNA1-205ENST00000409542 SDF4Q9BRK5 362 aa14.36□□□□□ -0.11
CHRNA1-205ENST00000409542 AAASQ9NRG9 546 aa14.36□□□□□ -0.11
CHRNA1-205ENST00000409542 VPS13AQ96RL7 3174 aa14.36□□□□□ -0.11
CHRNA1-205ENST00000409542 CCDC69A6NI79 296 aa14.35□□□□□ -0.11
CHRNA1-205ENST00000409542 GJB2P29033 226 aa14.35□□□□□ -0.11
CHRNA1-205ENST00000409542 DSC3Q14574 896 aa14.35□□□□□ -0.11
CHRNA1-205ENST00000409542 KIZQ2M2Z5 673 aa14.35□□□□□ -0.11
CHRNA1-205ENST00000409542 FANCBQ8NB91 859 aa14.35□□□□□ -0.11
CHRNA1-205ENST00000409542 MRPS27Q92552 414 aaKnown RBP14.35□□□□□ -0.11
CHRNA1-205ENST00000409542 CASD1Q96PB1 797 aa14.35□□□□□ -0.11
CHRNA1-205ENST00000409542 OSMRQ99650 979 aa14.35□□□□□ -0.11
CHRNA1-205ENST00000409542 C1orf112Q9NSG2 853 aa14.35□□□□□ -0.11
CHRNA1-205ENST00000409542 TPCN1Q9ULQ1 816 aa14.35□□□□□ -0.11
CHRNA1-205ENST00000409542 MEIS1O00470 390 aa14.34□□□□□ -0.11
CHRNA1-205ENST00000409542 ADAMTS3O15072 1205 aa14.34□□□□□ -0.11
CHRNA1-205ENST00000409542 HBP1O60381 514 aa14.34□□□□□ -0.11
CHRNA1-205ENST00000409542 GPR32O75388 356 aa14.34□□□□□ -0.11
CHRNA1-205ENST00000409542 VTNP04004 478 aa14.34□□□□□ -0.11
CHRNA1-205ENST00000409542 PLCB3Q01970 1234 aa14.34□□□□□ -0.11
CHRNA1-205ENST00000409542 CEP55Q53EZ4 464 aa14.34□□□□□ -0.11
CHRNA1-205ENST00000409542 TRMT1LQ7Z2T5 733 aaKnown RBP14.34□□□□□ -0.11
CHRNA1-205ENST00000409542 FEZF2Q8TBJ5 459 aa14.34□□□□□ -0.11
CHRNA1-205ENST00000409542 RASGRP4Q8TDF6 673 aa14.34□□□□□ -0.11
CHRNA1-205ENST00000409542 ANP32BQ92688 251 aaKnown RBP14.34□□□□□ -0.11
CHRNA1-205ENST00000409542 TMEM87BQ96K49 555 aa14.34□□□□□ -0.11
CHRNA1-205ENST00000409542 TCF25Q9BQ70 676 aa14.34□□□□□ -0.11
CHRNA1-205ENST00000409542 LARP6Q9BRS8 491 aaKnown RBP14.34□□□□□ -0.11
CHRNA1-205ENST00000409542 MTA3Q9BTC8 594 aa14.34□□□□□ -0.11
CHRNA1-205ENST00000409542 ANO3Q9BYT9 981 aa14.34□□□□□ -0.11
CHRNA1-205ENST00000409542 ATP6V0A4Q9HBG4 840 aa14.34□□□□□ -0.11
CHRNA1-205ENST00000409542 TMEM161AQ9NX61 479 aa14.34□□□□□ -0.11
CHRNA1-205ENST00000409542 MTMR6Q9Y217 621 aa14.34□□□□□ -0.11
CHRNA1-205ENST00000409542 C2CD4DB7Z1M9 353 aa14.33□□□□□ -0.12
CHRNA1-205ENST00000409542 BACH1O14867 736 aa14.33□□□□□ -0.12
CHRNA1-205ENST00000409542 GPR182O15218 404 aa14.33□□□□□ -0.12
CHRNA1-205ENST00000409542 DHX15O43143 795 aaKnown RBP14.33□□□□□ -0.12
CHRNA1-205ENST00000409542 C22orf31O95567 290 aa14.33□□□□□ -0.12
CHRNA1-205ENST00000409542 LAG3P18627 525 aa14.33□□□□□ -0.12
CHRNA1-205ENST00000409542 PDCP20941 246 aa14.33□□□□□ -0.12
CHRNA1-205ENST00000409542 MCM5P33992 734 aa14.33□□□□□ -0.12
CHRNA1-205ENST00000409542 LIFRP42702 1097 aa14.33□□□□□ -0.12
CHRNA1-205ENST00000409542 CRYBB1P53674 252 aaPredicted RBP14.33□□□□□ -0.12
CHRNA1-205ENST00000409542 TOB2Q14106 344 aaPredicted RBP14.33□□□□□ -0.12
CHRNA1-205ENST00000409542 PDE12Q6L8Q7 609 aaKnown RBP14.33□□□□□ -0.12
CHRNA1-205ENST00000409542 SWSAP1Q6NVH7 229 aa14.33□□□□□ -0.12
CHRNA1-205ENST00000409542 KANK3Q6NY19 840 aa14.33□□□□□ -0.12
CHRNA1-205ENST00000409542 KCNT2Q6UVM3 1135 aa14.33□□□□□ -0.12
CHRNA1-205ENST00000409542 ASCL5Q7RTU5 278 aa14.33□□□□□ -0.12
CHRNA1-205ENST00000409542 TMTC2Q8N394 836 aa14.33□□□□□ -0.12
CHRNA1-205ENST00000409542 KREMEN2Q8NCW0 462 aa14.33□□□□□ -0.12
CHRNA1-205ENST00000409542 POMKQ9H5K3 350 aa14.33□□□□□ -0.12
CHRNA1-205ENST00000409542 RIC8AQ9NPQ8 531 aa14.33□□□□□ -0.12
CHRNA1-205ENST00000409542 RRAGDQ9NQL2 400 aaPredicted RBP14.33□□□□□ -0.12
CHRNA1-205ENST00000409542 ENTPD7Q9NQZ7 604 aa14.33□□□□□ -0.12
CHRNA1-205ENST00000409542 LZTS1Q9Y250 596 aa14.33□□□□□ -0.12
CHRNA1-205ENST00000409542 CNTNAP5Q8WYK1 1306 aa14.33□□□□□ -0.12
CHRNA1-205ENST00000409542 FAM86B1E9PN63 330 aa14.32□□□□□ -0.12
CHRNA1-205ENST00000409542 WEE2P0C1S8 567 aa14.32□□□□□ -0.12
CHRNA1-205ENST00000409542 FAM86B2P0C5J1 330 aa14.32□□□□□ -0.12
CHRNA1-205ENST00000409542 FUT2Q10981 343 aa14.32□□□□□ -0.12
CHRNA1-205ENST00000409542 ZNF484Q5JVG2 852 aa14.32□□□□□ -0.12
CHRNA1-205ENST00000409542 PDXDC2PQ6P474 469 aa14.32□□□□□ -0.12
CHRNA1-205ENST00000409542 ZBTB33Q86T24 672 aa14.32□□□□□ -0.12
CHRNA1-205ENST00000409542 MICU3Q86XE3 530 aa14.32□□□□□ -0.12
CHRNA1-205ENST00000409542 TMEM105Q8N8V8 129 aa14.32□□□□□ -0.12
CHRNA1-205ENST00000409542 ZNF668Q96K58 619 aaPredicted RBP14.32□□□□□ -0.12
CHRNA1-205ENST00000409542 TMEM117Q9H0C3 514 aa14.32□□□□□ -0.12
CHRNA1-205ENST00000409542 RBSNQ9H1K0 784 aa14.32□□□□□ -0.12
CHRNA1-205ENST00000409542 ELAC1Q9H777 363 aaKnown RBP14.32□□□□□ -0.12
CHRNA1-205ENST00000409542 ZNF302Q9NR11 478 aa14.32□□□□□ -0.12
CHRNA1-205ENST00000409542 SLC12A7Q9Y666 1083 aa14.32□□□□□ -0.12
CHRNA1-205ENST00000409542 COL1A2P08123 1366 aa14.32□□□□□ -0.12
CHRNA1-205ENST00000409542 GALR2O43603 387 aaPredicted RBP14.31□□□□□ -0.12
CHRNA1-205ENST00000409542 CALM1P0DP23 149 aa14.31□□□□□ -0.12
CHRNA1-205ENST00000409542 CALM2P0DP24 149 aa14.31□□□□□ -0.12
CHRNA1-205ENST00000409542 CALM3P0DP25 149 aa14.31□□□□□ -0.12
CHRNA1-205ENST00000409542 CLK2P49760 499 aaKnown RBP14.31□□□□□ -0.12
CHRNA1-205ENST00000409542 SLC26A2P50443 739 aa14.31□□□□□ -0.12
CHRNA1-205ENST00000409542 NAPAP54920 295 aa14.31□□□□□ -0.12
CHRNA1-205ENST00000409542 UBE2HP62256 183 aa14.31□□□□□ -0.12
CHRNA1-205ENST00000409542 FAM160B1Q5W0V3 765 aa14.31□□□□□ -0.12
CHRNA1-205ENST00000409542 SYCE3A1L190 88 aa14.31□□□□□ -0.12
CHRNA1-205ENST00000409542 C2orf71A6NGG8 1288 aa14.31□□□□□ -0.12
CHRNA1-205ENST00000409542 PROB1E7EW31 1015 aa14.31□□□□□ -0.12
CHRNA1-205ENST00000409542 ASGR2P07307 311 aa14.31□□□□□ -0.12
CHRNA1-205ENST00000409542 HMGB1P09429 215 aaKnown RBP14.31□□□□□ -0.12
CHRNA1-205ENST00000409542 SREBF1P36956 1147 aa14.31□□□□□ -0.12
CHRNA1-205ENST00000409542 CLCN3P51790 818 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms