RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 TBC1D8BQ0IIM8 1120 aa18.34■□□□□ 0.53
TSPAN4-208ENST00000409531 DHX8Q14562 1220 aaKnown RBP18.34■□□□□ 0.53
TSPAN4-208ENST00000409531 TARBP2Q15633 366 aaKnown RBP18.34■□□□□ 0.53
TSPAN4-208ENST00000409531 GRIK4Q16099 956 aa18.34■□□□□ 0.53
TSPAN4-208ENST00000409531 KLHL40Q2TBA0 621 aa18.34■□□□□ 0.53
TSPAN4-208ENST00000409531 TMEM240Q5SV17 173 aa18.34■□□□□ 0.53
TSPAN4-208ENST00000409531 PADI6Q6TGC4 694 aa18.34■□□□□ 0.53
TSPAN4-208ENST00000409531 ZNF365Q70YC5 407 aa18.34■□□□□ 0.53
TSPAN4-208ENST00000409531 SERINC5Q86VE9 423 aa18.34■□□□□ 0.53
TSPAN4-208ENST00000409531 LRRC15Q8TF66 581 aa18.34■□□□□ 0.53
TSPAN4-208ENST00000409531 SLC7A3Q8WY07 619 aa18.34■□□□□ 0.53
TSPAN4-208ENST00000409531 DHX38Q92620 1227 aaKnown RBP18.34■□□□□ 0.53
TSPAN4-208ENST00000409531 SYAP1Q96A49 352 aaPredicted RBP18.34■□□□□ 0.53
TSPAN4-208ENST00000409531 TIPINQ9BVW5 301 aa18.34■□□□□ 0.53
TSPAN4-208ENST00000409531 TMEM150BA6NC51 233 aa18.33■□□□□ 0.53
TSPAN4-208ENST00000409531 MAGEB2O15479 319 aa18.33■□□□□ 0.53
TSPAN4-208ENST00000409531 TREHO43280 583 aa18.33■□□□□ 0.53
TSPAN4-208ENST00000409531 GAS2O43903 313 aaKnown RBP18.33■□□□□ 0.53
TSPAN4-208ENST00000409531 FGBP02675 491 aa18.33■□□□□ 0.53
TSPAN4-208ENST00000409531 RFC2P35250 354 aa18.33■□□□□ 0.53
TSPAN4-208ENST00000409531 POLGP54098 1239 aaPredicted RBP18.33■□□□□ 0.53
TSPAN4-208ENST00000409531 ADAM17P78536 824 aa18.33■□□□□ 0.53
TSPAN4-208ENST00000409531 RINT1Q6NUQ1 792 aa18.33■□□□□ 0.53
TSPAN4-208ENST00000409531 PSRC1Q6PGN9 363 aaPredicted RBP18.33■□□□□ 0.53
TSPAN4-208ENST00000409531 GPBP1Q86WP2 473 aa18.33■□□□□ 0.53
TSPAN4-208ENST00000409531 MCPH1Q8NEM0 835 aa18.33■□□□□ 0.53
TSPAN4-208ENST00000409531 PAGE5Q96GU1 130 aa18.33■□□□□ 0.53
TSPAN4-208ENST00000409531 ATP6V0A4Q9HBG4 840 aa18.33■□□□□ 0.53
TSPAN4-208ENST00000409531 LAMA3Q16787 3333 aa18.32■□□□□ 0.52
TSPAN4-208ENST00000409531 SOX1O00570 391 aaPredicted RBP18.32■□□□□ 0.52
TSPAN4-208ENST00000409531 USO1O60763 962 aaKnown RBP18.32■□□□□ 0.52
TSPAN4-208ENST00000409531 PARNO95453 639 aaKnown RBP18.32■□□□□ 0.52
TSPAN4-208ENST00000409531 KRT18P05783 430 aaKnown RBP18.32■□□□□ 0.52
TSPAN4-208ENST00000409531 PFKMP08237 780 aa18.32■□□□□ 0.52
TSPAN4-208ENST00000409531 CKBP12277 381 aa18.32■□□□□ 0.52
TSPAN4-208ENST00000409531 SELPP16109 830 aa18.32■□□□□ 0.52
TSPAN4-208ENST00000409531 CYP11B2P19099 503 aa18.32■□□□□ 0.52
TSPAN4-208ENST00000409531 AFMP43652 599 aa18.32■□□□□ 0.52
TSPAN4-208ENST00000409531 TRIM71Q2Q1W2 868 aaKnown RBP18.32■□□□□ 0.52
TSPAN4-208ENST00000409531 C1orf186Q6ZWK4 172 aa18.32■□□□□ 0.52
TSPAN4-208ENST00000409531 LMBR1Q8WVP7 490 aa18.32■□□□□ 0.52
TSPAN4-208ENST00000409531 RNPC3Q96LT9 517 aaKnown RBP18.32■□□□□ 0.52
TSPAN4-208ENST00000409531 NUP62CLQ9H1M0 184 aa18.32■□□□□ 0.52
TSPAN4-208ENST00000409531 DHX33Q9H6R0 707 aaKnown RBP18.32■□□□□ 0.52
TSPAN4-208ENST00000409531 ZBTB42B2RXF5 422 aa18.31■□□□□ 0.52
TSPAN4-208ENST00000409531 GTPBP6O43824 516 aaPredicted RBP18.31■□□□□ 0.52
TSPAN4-208ENST00000409531 MAFO75444 373 aaPredicted RBP18.31■□□□□ 0.52
TSPAN4-208ENST00000409531 GUCY2CP25092 1073 aa18.31■□□□□ 0.52
TSPAN4-208ENST00000409531 IGBP1P78318 339 aa18.31■□□□□ 0.52
TSPAN4-208ENST00000409531 EMC2Q15006 297 aa18.31■□□□□ 0.52
TSPAN4-208ENST00000409531 POSTNQ15063 836 aa18.31■□□□□ 0.52
TSPAN4-208ENST00000409531 CNNM4Q6P4Q7 775 aa18.31■□□□□ 0.52
TSPAN4-208ENST00000409531 LRRC8DQ7L1W4 858 aa18.31■□□□□ 0.52
TSPAN4-208ENST00000409531 DDX12PQ92771 950 aa18.31■□□□□ 0.52
TSPAN4-208ENST00000409531 WNT8BQ93098 351 aa18.31■□□□□ 0.52
TSPAN4-208ENST00000409531 VWCEQ96DN2 955 aa18.31■□□□□ 0.52
TSPAN4-208ENST00000409531 CEP89Q96ST8 783 aa18.31■□□□□ 0.52
TSPAN4-208ENST00000409531 MTRQ99707 1265 aa18.31■□□□□ 0.52
TSPAN4-208ENST00000409531 C7orf25Q9BPX7 421 aa18.31■□□□□ 0.52
TSPAN4-208ENST00000409531 SH2D3AQ9BRG2 576 aa18.31■□□□□ 0.52
TSPAN4-208ENST00000409531 CLSTN2Q9H4D0 955 aa18.31■□□□□ 0.52
TSPAN4-208ENST00000409531 TUBE1Q9UJT0 475 aa18.31■□□□□ 0.52
TSPAN4-208ENST00000409531 ODF2LQ9ULJ1 636 aa18.31■□□□□ 0.52
TSPAN4-208ENST00000409531 MYMKA6NI61 221 aa18.3■□□□□ 0.52
TSPAN4-208ENST00000409531 KLRC1P26715 233 aa18.3■□□□□ 0.52
TSPAN4-208ENST00000409531 TMOD1P28289 359 aa18.3■□□□□ 0.52
TSPAN4-208ENST00000409531 DNM2P50570 870 aa18.3■□□□□ 0.52
TSPAN4-208ENST00000409531 ZNF618Q5T7W0 954 aa18.3■□□□□ 0.52
TSPAN4-208ENST00000409531 RASIP1Q5U651 963 aa18.3■□□□□ 0.52
TSPAN4-208ENST00000409531 DEFB128Q7Z7B8 93 aa18.3■□□□□ 0.52
TSPAN4-208ENST00000409531 TCP11Q8WWU5 503 aa18.3■□□□□ 0.52
TSPAN4-208ENST00000409531 HERVK_113Q902F9 699 aa18.3■□□□□ 0.52
TSPAN4-208ENST00000409531 STAMQ92783 540 aa18.3■□□□□ 0.52
TSPAN4-208ENST00000409531 LRCH3Q96II8 777 aa18.3■□□□□ 0.52
TSPAN4-208ENST00000409531 DRC1Q96MC2 740 aa18.3■□□□□ 0.52
TSPAN4-208ENST00000409531 RUSC1Q9BVN2 902 aa18.3■□□□□ 0.52
TSPAN4-208ENST00000409531 TRIM9Q9C026 710 aa18.3■□□□□ 0.52
TSPAN4-208ENST00000409531 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.29■□□□□ 0.52
TSPAN4-208ENST00000409531 IGKV6-21A0A0C4DH24 114 aa18.29■□□□□ 0.52
TSPAN4-208ENST00000409531 MBLAC1A4D2B0 266 aaPredicted RBP18.29■□□□□ 0.52
TSPAN4-208ENST00000409531 TRAK2O60296 914 aa18.29■□□□□ 0.52
TSPAN4-208ENST00000409531 SMC2O95347 1197 aa18.29■□□□□ 0.52
TSPAN4-208ENST00000409531 C22orf31O95567 290 aa18.29■□□□□ 0.52
TSPAN4-208ENST00000409531 RPLP2P05387 115 aaKnown RBP18.29■□□□□ 0.52
TSPAN4-208ENST00000409531 THPOP40225 353 aa18.29■□□□□ 0.52
TSPAN4-208ENST00000409531 ARSHQ5FYA8 562 aa18.29■□□□□ 0.52
TSPAN4-208ENST00000409531 MARCH8Q5T0T0 291 aa18.29■□□□□ 0.52
TSPAN4-208ENST00000409531 CCDC183Q5T5S1 534 aa18.29■□□□□ 0.52
TSPAN4-208ENST00000409531 GPR153Q6NV75 609 aa18.29■□□□□ 0.52
TSPAN4-208ENST00000409531 MTHFD1LQ6UB35 978 aa18.29■□□□□ 0.52
TSPAN4-208ENST00000409531 OTOP2Q7RTS6 562 aa18.29■□□□□ 0.52
TSPAN4-208ENST00000409531 GRAMD1CQ8IYS0 662 aa18.29■□□□□ 0.52
TSPAN4-208ENST00000409531 TRAPPC12Q8WVT3 735 aa18.29■□□□□ 0.52
TSPAN4-208ENST00000409531 KIFAP3Q92845 792 aa18.29■□□□□ 0.52
TSPAN4-208ENST00000409531 CCDC47Q96A33 483 aaKnown RBP18.29■□□□□ 0.52
TSPAN4-208ENST00000409531 MTIF3Q9H2K0 278 aaKnown RBP18.29■□□□□ 0.52
TSPAN4-208ENST00000409531 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.28■□□□□ 0.52
TSPAN4-208ENST00000409531 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.28■□□□□ 0.52
TSPAN4-208ENST00000409531 CAND2O75155 1236 aa18.28■□□□□ 0.52
TSPAN4-208ENST00000409531 TBCAO75347 108 aaKnown RBP18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms