RNA–Protein interactions for RNA: ENST00000409455.5

LIMS2-205, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-205ENST00000409455 ORC2Q13416 577 aaPredicted RBP16.76■□□□□ 0.27
LIMS2-205ENST00000409455 ZCWPW2Q504Y3 356 aa16.76■□□□□ 0.27
LIMS2-205ENST00000409455 SH3BP5LQ7L8J4 393 aa16.76■□□□□ 0.27
LIMS2-205ENST00000409455 TRPM8Q7Z2W7 1104 aa16.76■□□□□ 0.27
LIMS2-205ENST00000409455 CEP120Q8N960 986 aa16.76■□□□□ 0.27
LIMS2-205ENST00000409455 RAB34Q9BZG1 259 aa16.76■□□□□ 0.27
LIMS2-205ENST00000409455 NSRP1Q9H0G5 558 aaKnown RBP16.76■□□□□ 0.27
LIMS2-205ENST00000409455 RAB17Q9H0T7 212 aa16.76■□□□□ 0.27
LIMS2-205ENST00000409455 MTMR4Q9NYA4 1195 aa16.76■□□□□ 0.27
LIMS2-205ENST00000409455 BZW2Q9Y6E2 419 aaKnown RBP16.76■□□□□ 0.27
LIMS2-205ENST00000409455 GOLGA8HP0CJ92 632 aa16.75■□□□□ 0.27
LIMS2-205ENST00000409455 GCKP35557 465 aa16.75■□□□□ 0.27
LIMS2-205ENST00000409455 PIGWQ7Z7B1 504 aa16.75■□□□□ 0.27
LIMS2-205ENST00000409455 RASGEF1CQ8N431 466 aa16.75■□□□□ 0.27
LIMS2-205ENST00000409455 PNMA5Q96PV4 448 aa16.75■□□□□ 0.27
LIMS2-205ENST00000409455 SPAG5Q96R06 1193 aa16.75■□□□□ 0.27
LIMS2-205ENST00000409455 GMLQ99445 158 aa16.75■□□□□ 0.27
LIMS2-205ENST00000409455 CELF4Q9BZC1 486 aaKnown RBP16.75■□□□□ 0.27
LIMS2-205ENST00000409455 VPS33BQ9H267 617 aa16.75■□□□□ 0.27
LIMS2-205ENST00000409455 NOP53Q9NZM5 478 aaKnown RBP16.75■□□□□ 0.27
LIMS2-205ENST00000409455 ZNRF3Q9ULT6 936 aa16.75■□□□□ 0.27
LIMS2-205ENST00000409455 ZNF646O15015 1829 aaPredicted RBP16.75■□□□□ 0.27
LIMS2-205ENST00000409455 KIF13BQ9NQT8 1826 aa16.75■□□□□ 0.27
LIMS2-205ENST00000409455 FAM196BA6NMK8 535 aa16.75■□□□□ 0.27
LIMS2-205ENST00000409455 EIF6P56537 245 aaKnown RBP16.75■□□□□ 0.27
LIMS2-205ENST00000409455 SLC35G1Q2M3R5 365 aa16.75■□□□□ 0.27
LIMS2-205ENST00000409455 FAM133BQ5BKY9 247 aaKnown RBP16.75■□□□□ 0.27
LIMS2-205ENST00000409455 CLEC10AQ8IUN9 316 aa16.75■□□□□ 0.27
LIMS2-205ENST00000409455 TRIM59Q8IWR1 403 aa16.75■□□□□ 0.27
LIMS2-205ENST00000409455 SYCE1Q8N0S2 351 aa16.75■□□□□ 0.27
LIMS2-205ENST00000409455 TPCN2Q8NHX9 752 aa16.75■□□□□ 0.27
LIMS2-205ENST00000409455 TBCKQ8TEA7 893 aa16.75■□□□□ 0.27
LIMS2-205ENST00000409455 SGIP1Q9BQI5 828 aa16.75■□□□□ 0.27
LIMS2-205ENST00000409455 DHX36Q9H2U1 1008 aaKnown RBP16.75■□□□□ 0.27
LIMS2-205ENST00000409455 DNAJC18Q9H819 358 aa16.75■□□□□ 0.27
LIMS2-205ENST00000409455 PALM3A6NDB9 673 aaPredicted RBP16.74■□□□□ 0.27
LIMS2-205ENST00000409455 SMCO2A6NFE2 343 aa16.74■□□□□ 0.27
LIMS2-205ENST00000409455 SKAP2O75563 359 aaPredicted RBP16.74■□□□□ 0.27
LIMS2-205ENST00000409455 MMP13P45452 471 aa16.74■□□□□ 0.27
LIMS2-205ENST00000409455 CALCRLQ16602 461 aa16.74■□□□□ 0.27
LIMS2-205ENST00000409455 USP17L2Q6R6M4 530 aa16.74■□□□□ 0.27
LIMS2-205ENST00000409455 NIM1KQ8IY84 436 aa16.74■□□□□ 0.27
LIMS2-205ENST00000409455 ATXN2LQ8WWM7 1075 aaKnown RBP16.74■□□□□ 0.27
LIMS2-205ENST00000409455 SPDL1Q96EA4 605 aa16.74■□□□□ 0.27
LIMS2-205ENST00000409455 TRIM31Q9BZY9 425 aa16.74■□□□□ 0.27
LIMS2-205ENST00000409455 GANQ9H2C0 597 aa16.74■□□□□ 0.27
LIMS2-205ENST00000409455 LRRC4CQ9HCJ2 640 aa16.74■□□□□ 0.27
LIMS2-205ENST00000409455 GOPCQ9HD26 462 aa16.74■□□□□ 0.27
LIMS2-205ENST00000409455 SUCLA2Q9P2R7 463 aaPredicted RBP16.74■□□□□ 0.27
LIMS2-205ENST00000409455 PI4KBQ9UBF8 816 aa16.74■□□□□ 0.27
LIMS2-205ENST00000409455 CCDC169A6NNP5 214 aa16.74■□□□□ 0.27
LIMS2-205ENST00000409455 FLOT1O75955 427 aa16.74■□□□□ 0.27
LIMS2-205ENST00000409455 FXR2P51116 673 aaKnown RBP eCLIP16.74■□□□□ 0.27
LIMS2-205ENST00000409455 DENND2CQ68D51 928 aa16.74■□□□□ 0.27
LIMS2-205ENST00000409455 ALKBH5Q6P6C2 394 aaKnown RBP16.74■□□□□ 0.27
LIMS2-205ENST00000409455 ZNF571Q7Z3V5 609 aaPredicted RBP16.74■□□□□ 0.27
LIMS2-205ENST00000409455 NEK9Q8TD19 979 aa16.74■□□□□ 0.27
LIMS2-205ENST00000409455 MYO3BQ8WXR4 1341 aa16.74■□□□□ 0.27
LIMS2-205ENST00000409455 UPF1Q92900 1129 aaKnown RBP eCLIP16.74■□□□□ 0.27
LIMS2-205ENST00000409455 PGM2Q96G03 612 aa16.74■□□□□ 0.27
LIMS2-205ENST00000409455 LZTS2Q9BRK4 669 aa16.74■□□□□ 0.27
LIMS2-205ENST00000409455 INTS9Q9NV88 658 aaKnown RBP16.74■□□□□ 0.27
LIMS2-205ENST00000409455 NAGPAQ9UK23 515 aa16.74■□□□□ 0.27
LIMS2-205ENST00000409455 TRPC6Q9Y210 931 aa16.74■□□□□ 0.27
LIMS2-205ENST00000409455 L3MBTL1Q9Y468 752 aa16.74■□□□□ 0.27
LIMS2-205ENST00000409455 IGKV6D-41A0A0C4DH26 115 aa16.73■□□□□ 0.27
LIMS2-205ENST00000409455 VIMP08670 466 aaKnown RBP16.73■□□□□ 0.27
LIMS2-205ENST00000409455 NUDT17P0C025 328 aa16.73■□□□□ 0.27
LIMS2-205ENST00000409455 ZBTB48P10074 688 aaPredicted RBP16.73■□□□□ 0.27
LIMS2-205ENST00000409455 CCNHP51946 323 aaPredicted RBP16.73■□□□□ 0.27
LIMS2-205ENST00000409455 MARSP56192 900 aaKnown RBP16.73■□□□□ 0.27
LIMS2-205ENST00000409455 COASYQ13057 564 aa16.73■□□□□ 0.27
LIMS2-205ENST00000409455 ZNF268Q14587 947 aaPredicted RBP16.73■□□□□ 0.27
LIMS2-205ENST00000409455 KRT79Q5XKE5 535 aa16.73■□□□□ 0.27
LIMS2-205ENST00000409455 BZW1Q7L1Q6 419 aaKnown RBP16.73■□□□□ 0.27
LIMS2-205ENST00000409455 DAAM2Q86T65 1068 aa16.73■□□□□ 0.27
LIMS2-205ENST00000409455 LRRC34Q8IZ02 419 aa16.73■□□□□ 0.27
LIMS2-205ENST00000409455 OGFOD1Q8N543 542 aa16.73■□□□□ 0.27
LIMS2-205ENST00000409455 ARMC2Q8NEN0 867 aa16.73■□□□□ 0.27
LIMS2-205ENST00000409455 SNX29Q8TEQ0 813 aa16.73■□□□□ 0.27
LIMS2-205ENST00000409455 ELAC2Q9BQ52 826 aaKnown RBP16.73■□□□□ 0.27
LIMS2-205ENST00000409455 CPVLQ9H3G5 476 aa16.73■□□□□ 0.27
LIMS2-205ENST00000409455 KANSL2Q9H9L4 492 aa16.73■□□□□ 0.27
LIMS2-205ENST00000409455 GOLGA6L10A0A0M3HER8 536 aa16.73■□□□□ 0.27
LIMS2-205ENST00000409455 KLRF2D3W0D1 207 aa16.73■□□□□ 0.27
LIMS2-205ENST00000409455 NPM3O75607 178 aaKnown RBP16.73■□□□□ 0.27
LIMS2-205ENST00000409455 CXCL9Q07325 125 aa16.73■□□□□ 0.27
LIMS2-205ENST00000409455 SF3A3Q12874 501 aaKnown RBP eCLIP16.73■□□□□ 0.27
LIMS2-205ENST00000409455 KCTD19Q17RG1 926 aaPredicted RBP16.73■□□□□ 0.27
LIMS2-205ENST00000409455 FAM26FQ5R3K3 315 aa16.73■□□□□ 0.27
LIMS2-205ENST00000409455 TXLNGYQ9BZA5 131 aa16.73■□□□□ 0.27
LIMS2-205ENST00000409455 TAOK3Q9H2K8 898 aa16.73■□□□□ 0.27
LIMS2-205ENST00000409455 PLIN4Q96Q06 1357 aa16.73■□□□□ 0.27
LIMS2-205ENST00000409455 SPDYE2BA6NHP3 402 aa16.72■□□□□ 0.27
LIMS2-205ENST00000409455 MPHOSPH10O00566 681 aaKnown RBP16.72■□□□□ 0.27
LIMS2-205ENST00000409455 RGS16O15492 202 aaPredicted RBP16.72■□□□□ 0.27
LIMS2-205ENST00000409455 SPDYE6P0CI01 402 aa16.72■□□□□ 0.27
LIMS2-205ENST00000409455 GRIK3Q13003 919 aa16.72■□□□□ 0.27
LIMS2-205ENST00000409455 SEPT2Q15019 361 aa16.72■□□□□ 0.27
LIMS2-205ENST00000409455 AGAP11Q8TF27 550 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms