RNA–Protein interactions for RNA: ENST00000409025.5

USP39-202, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5 BASIC

Gene USP39, Length 1,946 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-202ENST00000409025 SMTNP53814 917 aa20.77■□□□□ 0.92
USP39-202ENST00000409025 XKR3Q5GH77 459 aa20.77■□□□□ 0.92
USP39-202ENST00000409025 ATRIPQ8WXE1 791 aa20.77■□□□□ 0.92
USP39-202ENST00000409025 SLC35C1Q96A29 364 aa20.77■□□□□ 0.92
USP39-202ENST00000409025 CCDC42Q96M95 316 aa20.77■□□□□ 0.92
USP39-202ENST00000409025 WDR24Q96S15 920 aa20.77■□□□□ 0.92
USP39-202ENST00000409025 MMP19Q99542 508 aa20.77■□□□□ 0.92
USP39-202ENST00000409025 EIF3CQ99613 913 aaKnown RBP20.77■□□□□ 0.92
USP39-202ENST00000409025 MROH8Q9H579 483 aa20.77■□□□□ 0.92
USP39-202ENST00000409025 NLRC4Q9NPP4 1024 aa20.77■□□□□ 0.92
USP39-202ENST00000409025 REXO2Q9Y3B8 237 aaKnown RBP20.77■□□□□ 0.92
USP39-202ENST00000409025 DGAT1O75907 488 aa20.76■□□□□ 0.91
USP39-202ENST00000409025 POTEJP0CG39 1038 aa20.76■□□□□ 0.91
USP39-202ENST00000409025 POLR2FP61218 127 aaKnown RBP20.76■□□□□ 0.91
USP39-202ENST00000409025 DMP1Q13316 513 aaPredicted RBP20.76■□□□□ 0.91
USP39-202ENST00000409025 NEDD9Q14511 834 aa20.76■□□□□ 0.91
USP39-202ENST00000409025 MCPH1Q8NEM0 835 aa20.76■□□□□ 0.91
USP39-202ENST00000409025 GTF3C2Q8WUA4 911 aaPredicted RBP20.76■□□□□ 0.91
USP39-202ENST00000409025 SYN2Q92777 582 aaPredicted RBP20.76■□□□□ 0.91
USP39-202ENST00000409025 C17orf75Q9HAS0 396 aa20.76■□□□□ 0.91
USP39-202ENST00000409025 ZNF302Q9NR11 478 aa20.76■□□□□ 0.91
USP39-202ENST00000409025 SYNGAP1Q96PV0 1343 aa20.76■□□□□ 0.91
USP39-202ENST00000409025 SLC16A4O15374 487 aa20.76■□□□□ 0.91
USP39-202ENST00000409025 EXOC3O60645 756 aa20.76■□□□□ 0.91
USP39-202ENST00000409025 TGFB3P10600 412 aa20.76■□□□□ 0.91
USP39-202ENST00000409025 UBA1P22314 1058 aaKnown RBP20.76■□□□□ 0.91
USP39-202ENST00000409025 SNRPFP62306 86 aaKnown RBP20.76■□□□□ 0.91
USP39-202ENST00000409025 EXOC3L4Q17RC7 722 aa20.76■□□□□ 0.91
USP39-202ENST00000409025 GBP6Q6ZN66 633 aa20.76■□□□□ 0.91
USP39-202ENST00000409025 R3HDMLQ9H3Y0 253 aa20.76■□□□□ 0.91
USP39-202ENST00000409025 PLCB1Q9NQ66 1216 aa20.76■□□□□ 0.91
USP39-202ENST00000409025 CYP26B1Q9NR63 512 aa20.76■□□□□ 0.91
USP39-202ENST00000409025 MYH9P35579 1960 aaKnown RBP20.76■□□□□ 0.91
USP39-202ENST00000409025 CCDC169A6NNP5 214 aa20.75■□□□□ 0.91
USP39-202ENST00000409025 FANCGO15287 622 aa20.75■□□□□ 0.91
USP39-202ENST00000409025 PGK2P07205 417 aa20.75■□□□□ 0.91
USP39-202ENST00000409025 ARHGAP25P42331 645 aa20.75■□□□□ 0.91
USP39-202ENST00000409025 ERVK-9P63128 1117 aa20.75■□□□□ 0.91
USP39-202ENST00000409025 SFMBT2Q5VUG0 894 aa20.75■□□□□ 0.91
USP39-202ENST00000409025 TMEM174Q8WUU8 243 aa20.75■□□□□ 0.91
USP39-202ENST00000409025 HVCN1Q96D96 273 aa20.75■□□□□ 0.91
USP39-202ENST00000409025 IRX2Q9BZI1 471 aaPredicted RBP20.75■□□□□ 0.91
USP39-202ENST00000409025 GANQ9H2C0 597 aa20.75■□□□□ 0.91
USP39-202ENST00000409025 HAUS4Q9H6D7 363 aa20.75■□□□□ 0.91
USP39-202ENST00000409025 ARHGAP20Q9P2F6 1191 aa20.75■□□□□ 0.91
USP39-202ENST00000409025 EXOC7Q9UPT5 735 aa20.75■□□□□ 0.91
USP39-202ENST00000409025 MAFBQ9Y5Q3 323 aaPredicted RBP20.75■□□□□ 0.91
USP39-202ENST00000409025 GTPBP10A4D1E9 387 aaKnown RBP20.74■□□□□ 0.91
USP39-202ENST00000409025 URI1O94763 535 aaPredicted RBP20.74■□□□□ 0.91
USP39-202ENST00000409025 SLU7O95391 586 aaKnown RBP20.74■□□□□ 0.91
USP39-202ENST00000409025 PPP2R5AQ15172 486 aa20.74■□□□□ 0.91
USP39-202ENST00000409025 WDR78Q5VTH9 848 aa20.74■□□□□ 0.91
USP39-202ENST00000409025 KIAA1328Q86T90 577 aa20.74■□□□□ 0.91
USP39-202ENST00000409025 C12orf56Q8IXR9 622 aa20.74■□□□□ 0.91
USP39-202ENST00000409025 SHCBP1Q8NEM2 672 aa20.74■□□□□ 0.91
USP39-202ENST00000409025 DEF6Q9H4E7 631 aa20.74■□□□□ 0.91
USP39-202ENST00000409025 ATP6V0A4Q9HBG4 840 aa20.74■□□□□ 0.91
USP39-202ENST00000409025 MYO1AQ9UBC5 1043 aa20.74■□□□□ 0.91
USP39-202ENST00000409025 LRRC37A2A6NM11 1700 aa20.74■□□□□ 0.91
USP39-202ENST00000409025 FARP2O94887 1054 aaPredicted RBP20.74■□□□□ 0.91
USP39-202ENST00000409025 CETPP11597 493 aa20.74■□□□□ 0.91
USP39-202ENST00000409025 NPTX2P47972 431 aa20.74■□□□□ 0.91
USP39-202ENST00000409025 SPA17Q15506 151 aa20.74■□□□□ 0.91
USP39-202ENST00000409025 ZNF569Q5MCW4 686 aa20.74■□□□□ 0.91
USP39-202ENST00000409025 ZNF662Q6ZS27 426 aa20.74■□□□□ 0.91
USP39-202ENST00000409025 SPIRE2Q8WWL2 714 aa20.74■□□□□ 0.91
USP39-202ENST00000409025 KMT5AQ9NQR1 393 aa20.74■□□□□ 0.91
USP39-202ENST00000409025 PDLIM7Q9NR12 457 aa20.74■□□□□ 0.91
USP39-202ENST00000409025 DNAJC25-GNG10A0A024R161 153 aa20.73■□□□□ 0.91
USP39-202ENST00000409025 OATP04181 439 aa20.73■□□□□ 0.91
USP39-202ENST00000409025 PLEKP08567 350 aaPredicted RBP20.73■□□□□ 0.91
USP39-202ENST00000409025 SLC9A1P19634 815 aa20.73■□□□□ 0.91
USP39-202ENST00000409025 PON1P27169 355 aa20.73■□□□□ 0.91
USP39-202ENST00000409025 EIF4A3P38919 411 aaKnown RBP20.73■□□□□ 0.91
USP39-202ENST00000409025 RTP1P59025 263 aa20.73■□□□□ 0.91
USP39-202ENST00000409025 FKBP1BP68106 108 aa20.73■□□□□ 0.91
USP39-202ENST00000409025 MTERF2Q49AM1 385 aa20.73■□□□□ 0.91
USP39-202ENST00000409025 KCNV1Q6PIU1 500 aa20.73■□□□□ 0.91
USP39-202ENST00000409025 EEPD1Q7L9B9 569 aa20.73■□□□□ 0.91
USP39-202ENST00000409025 TMEM161BQ8NDZ6 487 aa20.73■□□□□ 0.91
USP39-202ENST00000409025 NTPCRQ9BSD7 190 aaKnown RBP20.73■□□□□ 0.91
USP39-202ENST00000409025 IGKV6D-21A0A0A0MT36 114 aa20.72■□□□□ 0.91
USP39-202ENST00000409025 CYP2C8P10632 490 aa20.72■□□□□ 0.91
USP39-202ENST00000409025 GTF2A2P52657 109 aa20.72■□□□□ 0.91
USP39-202ENST00000409025 APBA1Q02410 837 aa20.72■□□□□ 0.91
USP39-202ENST00000409025 SLC9C1Q4G0N8 1177 aa20.72■□□□□ 0.91
USP39-202ENST00000409025 TSC1Q92574 1164 aa20.72■□□□□ 0.91
USP39-202ENST00000409025 FGD4Q96M96 766 aa20.72■□□□□ 0.91
USP39-202ENST00000409025 TBX20Q9UMR3 447 aa20.72■□□□□ 0.91
USP39-202ENST00000409025 GSTTP1A0A1W2PQM5 241 aa20.72■□□□□ 0.91
USP39-202ENST00000409025 SSU72P8A0A1W2PR75 194 aa20.72■□□□□ 0.91
USP39-202ENST00000409025 SERPING1P05155 500 aa20.72■□□□□ 0.91
USP39-202ENST00000409025 ACTN1P12814 892 aa20.72■□□□□ 0.91
USP39-202ENST00000409025 KRT13P13646 458 aa20.72■□□□□ 0.91
USP39-202ENST00000409025 KIF11P52732 1056 aa20.72■□□□□ 0.91
USP39-202ENST00000409025 MAPK8IP2Q13387 824 aaPredicted RBP20.72■□□□□ 0.91
USP39-202ENST00000409025 KLHDC7AQ5VTJ3 777 aa20.72■□□□□ 0.91
USP39-202ENST00000409025 ZNF526Q8TF50 670 aaPredicted RBP20.72■□□□□ 0.91
USP39-202ENST00000409025 JAKMIP2Q96AA8 810 aa20.72■□□□□ 0.91
USP39-202ENST00000409025 ERO1AQ96HE7 468 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms