RNA–Protein interactions for RNA: ENST00000409020.5

NIF3L1-202, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-202ENST00000409020 SKIV2LQ15477 1246 aaKnown RBP10.87□□□□□ -0.67
NIF3L1-202ENST00000409020 EPC2Q52LR7 807 aa10.87□□□□□ -0.67
NIF3L1-202ENST00000409020 TJAP1Q5JTD0 557 aa10.87□□□□□ -0.67
NIF3L1-202ENST00000409020 IER5Q5VY09 327 aa10.87□□□□□ -0.67
NIF3L1-202ENST00000409020 CPLX2Q6PUV4 134 aaKnown RBP10.87□□□□□ -0.67
NIF3L1-202ENST00000409020 B3GNT9Q6UX72 402 aa10.87□□□□□ -0.67
NIF3L1-202ENST00000409020 CRIPAKQ8N1N5 446 aa10.87□□□□□ -0.67
NIF3L1-202ENST00000409020 LRRC71Q8N4P6 559 aa10.87□□□□□ -0.67
NIF3L1-202ENST00000409020 GTF3C6Q969F1 213 aa10.87□□□□□ -0.67
NIF3L1-202ENST00000409020 KIF12Q96FN5 646 aa10.87□□□□□ -0.67
NIF3L1-202ENST00000409020 MBOAT7Q96N66 472 aa10.87□□□□□ -0.67
NIF3L1-202ENST00000409020 STK36Q9NRP7 1315 aa10.87□□□□□ -0.67
NIF3L1-202ENST00000409020 NOC2LQ9Y3T9 749 aaKnown RBP10.87□□□□□ -0.67
NIF3L1-202ENST00000409020 COL1A2P08123 1366 aa10.86□□□□□ -0.67
NIF3L1-202ENST00000409020 OATP04181 439 aa10.86□□□□□ -0.67
NIF3L1-202ENST00000409020 KCNQ1P51787 676 aa10.86□□□□□ -0.67
NIF3L1-202ENST00000409020 NEK4P51957 841 aa10.86□□□□□ -0.67
NIF3L1-202ENST00000409020 PAK2Q13177 524 aa10.86□□□□□ -0.67
NIF3L1-202ENST00000409020 DRP2Q13474 957 aa10.86□□□□□ -0.67
NIF3L1-202ENST00000409020 LETM2Q2VYF4 491 aa10.86□□□□□ -0.67
NIF3L1-202ENST00000409020 ZNF484Q5JVG2 852 aa10.86□□□□□ -0.67
NIF3L1-202ENST00000409020 PIK3AP1Q6ZUJ8 805 aa10.86□□□□□ -0.67
NIF3L1-202ENST00000409020 METTL13Q8N6R0 699 aa10.86□□□□□ -0.67
NIF3L1-202ENST00000409020 NSUN7Q8NE18 718 aaKnown RBP10.86□□□□□ -0.67
NIF3L1-202ENST00000409020 NECAB3Q96P71 396 aaPredicted RBP10.86□□□□□ -0.67
NIF3L1-202ENST00000409020 ASB2Q96Q27 587 aa10.86□□□□□ -0.67
NIF3L1-202ENST00000409020 RIT2Q99578 217 aa10.86□□□□□ -0.67
NIF3L1-202ENST00000409020 OSMRQ99650 979 aa10.86□□□□□ -0.67
NIF3L1-202ENST00000409020 ORC3Q9UBD5 711 aaPredicted RBP10.86□□□□□ -0.67
NIF3L1-202ENST00000409020 DDX25Q9UHL0 483 aaKnown RBP10.86□□□□□ -0.67
NIF3L1-202ENST00000409020 TCEAL9Q9UHQ7 104 aa10.86□□□□□ -0.67
NIF3L1-202ENST00000409020 KDM3AQ9Y4C1 1321 aa10.86□□□□□ -0.67
NIF3L1-202ENST00000409020 EML1O00423 815 aa10.85□□□□□ -0.67
NIF3L1-202ENST00000409020 WNT7AO00755 349 aa10.85□□□□□ -0.67
NIF3L1-202ENST00000409020 GPR32O75388 356 aa10.85□□□□□ -0.67
NIF3L1-202ENST00000409020 CDKL5O76039 1030 aa10.85□□□□□ -0.67
NIF3L1-202ENST00000409020 CSPG5O95196 566 aa10.85□□□□□ -0.67
NIF3L1-202ENST00000409020 STBD1O95210 358 aa10.85□□□□□ -0.67
NIF3L1-202ENST00000409020 NONOQ15233 471 aaKnown RBP eCLIP10.85□□□□□ -0.67
NIF3L1-202ENST00000409020 FAM228AQ86W67 206 aa10.85□□□□□ -0.67
NIF3L1-202ENST00000409020 LINC01465Q8N7H1 131 aa10.85□□□□□ -0.67
NIF3L1-202ENST00000409020 MNS1Q8NEH6 495 aa10.85□□□□□ -0.67
NIF3L1-202ENST00000409020 FBXO22Q8NEZ5 403 aa10.85□□□□□ -0.67
NIF3L1-202ENST00000409020 TEKT3Q9BXF9 490 aa10.85□□□□□ -0.67
NIF3L1-202ENST00000409020 ERVK-5Q9HDB9 667 aa10.85□□□□□ -0.67
NIF3L1-202ENST00000409020 VAV3Q9UKW4 847 aa10.85□□□□□ -0.67
NIF3L1-202ENST00000409020 LOXHD1Q8IVV2 1947 aa10.85□□□□□ -0.67
NIF3L1-202ENST00000409020 ADGRA3Q8IWK6 1321 aa10.85□□□□□ -0.67
NIF3L1-202ENST00000409020 M0QZ92 97 aa10.85□□□□□ -0.67
NIF3L1-202ENST00000409020 NFX1Q12986 1120 aaKnown RBP10.85□□□□□ -0.67
NIF3L1-202ENST00000409020 C8orf34Q49A92 452 aa10.85□□□□□ -0.67
NIF3L1-202ENST00000409020 GALNT17Q6IS24 598 aa10.85□□□□□ -0.67
NIF3L1-202ENST00000409020 KRT25Q7Z3Z0 450 aa10.85□□□□□ -0.67
NIF3L1-202ENST00000409020 TMEM192Q8IY95 271 aa10.85□□□□□ -0.67
NIF3L1-202ENST00000409020 NME8Q8N427 588 aa10.85□□□□□ -0.67
NIF3L1-202ENST00000409020 ATXN2LQ8WWM7 1075 aaKnown RBP10.85□□□□□ -0.67
NIF3L1-202ENST00000409020 HAS1Q92839 578 aa10.85□□□□□ -0.67
NIF3L1-202ENST00000409020 TNPO1Q92973 898 aaKnown RBP10.85□□□□□ -0.67
NIF3L1-202ENST00000409020 TNFRSF25Q93038 417 aa10.85□□□□□ -0.67
NIF3L1-202ENST00000409020 ZNF689Q96CS4 500 aaPredicted RBP10.85□□□□□ -0.67
NIF3L1-202ENST00000409020 CEP89Q96ST8 783 aa10.85□□□□□ -0.67
NIF3L1-202ENST00000409020 DONSONQ9NYP3 566 aa10.85□□□□□ -0.67
NIF3L1-202ENST00000409020 WRAP73Q9P2S5 460 aaPredicted RBP10.85□□□□□ -0.67
NIF3L1-202ENST00000409020 HCSTQ9UBK5 93 aa10.85□□□□□ -0.67
NIF3L1-202ENST00000409020 ST3GAL5Q9UNP4 418 aa10.85□□□□□ -0.67
NIF3L1-202ENST00000409020 CCDC194A0A1B0GVG4 234 aa10.84□□□□□ -0.67
NIF3L1-202ENST00000409020 CCNT1O60563 726 aaKnown RBP10.84□□□□□ -0.67
NIF3L1-202ENST00000409020 RPS6KA5O75582 802 aa10.84□□□□□ -0.67
NIF3L1-202ENST00000409020 PPP1R37O75864 691 aa10.84□□□□□ -0.67
NIF3L1-202ENST00000409020 DGKIO75912 1065 aa10.84□□□□□ -0.67
NIF3L1-202ENST00000409020 JAK3P52333 1124 aa10.84□□□□□ -0.67
NIF3L1-202ENST00000409020 MRPS5P82675 430 aaKnown RBP10.84□□□□□ -0.67
NIF3L1-202ENST00000409020 CBX1P83916 185 aa10.84□□□□□ -0.67
NIF3L1-202ENST00000409020 ANKRD1Q15327 319 aa10.84□□□□□ -0.67
NIF3L1-202ENST00000409020 PAN2Q504Q3 1202 aaKnown RBP10.84□□□□□ -0.67
NIF3L1-202ENST00000409020 EFCAB12Q6NXP0 572 aa10.84□□□□□ -0.67
NIF3L1-202ENST00000409020 MIER3Q7Z3K6 550 aa10.84□□□□□ -0.67
NIF3L1-202ENST00000409020 EFCAB3Q8N7B9 438 aa10.84□□□□□ -0.67
NIF3L1-202ENST00000409020 KIF2CQ99661 725 aa10.84□□□□□ -0.67
NIF3L1-202ENST00000409020 ADAMTS10Q9H324 1103 aa10.84□□□□□ -0.67
NIF3L1-202ENST00000409020 KCNMB3Q9NPA1 279 aa10.84□□□□□ -0.67
NIF3L1-202ENST00000409020 MRPL42Q9Y6G3 142 aaKnown RBP10.84□□□□□ -0.67
NIF3L1-202ENST00000409020 MYO7AQ13402 2215 aa10.84□□□□□ -0.67
NIF3L1-202ENST00000409020 TTC3P53804 2025 aa10.84□□□□□ -0.67
NIF3L1-202ENST00000409020 EVPLQ92817 2033 aa10.84□□□□□ -0.67
NIF3L1-202ENST00000409020 H3BNC9 293 aa10.83□□□□□ -0.68
NIF3L1-202ENST00000409020 CSDE1O75534 798 aaKnown RBP10.83□□□□□ -0.68
NIF3L1-202ENST00000409020 FGFR4P22455 802 aa10.83□□□□□ -0.68
NIF3L1-202ENST00000409020 CTNNB1P35222 781 aa10.83□□□□□ -0.68
NIF3L1-202ENST00000409020 GTF2A1P52655 376 aaPredicted RBP10.83□□□□□ -0.68
NIF3L1-202ENST00000409020 NLRP11P59045 1033 aaKnown RBP10.83□□□□□ -0.68
NIF3L1-202ENST00000409020 GPM6BQ13491 265 aa10.83□□□□□ -0.68
NIF3L1-202ENST00000409020 BTG3Q14201 252 aaPredicted RBP10.83□□□□□ -0.68
NIF3L1-202ENST00000409020 TARBP2Q15633 366 aaKnown RBP10.83□□□□□ -0.68
NIF3L1-202ENST00000409020 MTERF2Q49AM1 385 aa10.83□□□□□ -0.68
NIF3L1-202ENST00000409020 CT47A1Q5JQC4 288 aaPredicted RBP10.83□□□□□ -0.68
NIF3L1-202ENST00000409020 PLA2G4FQ68DD2 849 aa10.83□□□□□ -0.68
NIF3L1-202ENST00000409020 MOXD1Q6UVY6 613 aa10.83□□□□□ -0.68
NIF3L1-202ENST00000409020 NEK8Q86SG6 692 aa10.83□□□□□ -0.68
NIF3L1-202ENST00000409020 FIBCD1Q8N539 461 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms