RNA–Protein interactions for RNA: ENST00000408061.1

SNORD88C-201, Transcript of small nucleolar RNA, C/D box 88C, humanhuman

BASIC

Gene SNORD88C, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88C-201ENST00000408061 NDST4Q9H3R1 872 aa11.35□□□□□ -0.59
SNORD88C-201ENST00000408061 TBC1D7Q9P0N9 293 aa11.35□□□□□ -0.59
SNORD88C-201ENST00000408061 SEPT9Q9UHD8 586 aaPredicted RBP11.35□□□□□ -0.59
SNORD88C-201ENST00000408061 ABT1Q9ULW3 272 aaKnown RBP11.35□□□□□ -0.59
SNORD88C-201ENST00000408061 Q9Y3F1 56 aa11.35□□□□□ -0.59
SNORD88C-201ENST00000408061 DAAM1Q9Y4D1 1078 aa11.35□□□□□ -0.59
SNORD88C-201ENST00000408061 MCM3APO60318 1980 aa11.35□□□□□ -0.59
SNORD88C-201ENST00000408061 SFI1A8K8P3 1242 aa11.34□□□□□ -0.59
SNORD88C-201ENST00000408061 ASAP2O43150 1006 aa11.34□□□□□ -0.59
SNORD88C-201ENST00000408061 TEX33O43247 280 aa11.34□□□□□ -0.59
SNORD88C-201ENST00000408061 PRPF6O94906 941 aaKnown RBP11.34□□□□□ -0.59
SNORD88C-201ENST00000408061 NR3C1P04150 777 aa11.34□□□□□ -0.59
SNORD88C-201ENST00000408061 TUBB4AP04350 444 aa11.34□□□□□ -0.59
SNORD88C-201ENST00000408061 MYBP10242 640 aa11.34□□□□□ -0.59
SNORD88C-201ENST00000408061 EPB41P11171 864 aaKnown RBP11.34□□□□□ -0.59
SNORD88C-201ENST00000408061 XRCC5P13010 732 aaKnown RBP11.34□□□□□ -0.59
SNORD88C-201ENST00000408061 HOXD13P35453 343 aa11.34□□□□□ -0.59
SNORD88C-201ENST00000408061 PSMC2P35998 433 aaKnown RBP11.34□□□□□ -0.59
SNORD88C-201ENST00000408061 RGS2P41220 211 aa11.34□□□□□ -0.59
SNORD88C-201ENST00000408061 POLGP54098 1239 aaPredicted RBP11.34□□□□□ -0.59
SNORD88C-201ENST00000408061 NPEPPSP55786 919 aa11.34□□□□□ -0.59
SNORD88C-201ENST00000408061 MCCD1P59942 119 aaPredicted RBP11.34□□□□□ -0.59
SNORD88C-201ENST00000408061 ACVR2BQ13705 512 aa11.34□□□□□ -0.59
SNORD88C-201ENST00000408061 TSR1Q2NL82 804 aaKnown RBP11.34□□□□□ -0.59
SNORD88C-201ENST00000408061 DUSP28Q4G0W2 176 aa11.34□□□□□ -0.59
SNORD88C-201ENST00000408061 CCDC40Q4G0X9 1142 aa11.34□□□□□ -0.59
SNORD88C-201ENST00000408061 HSP90AA4PQ58FG1 418 aa11.34□□□□□ -0.59
SNORD88C-201ENST00000408061 FAM102BQ5T8I3 360 aa11.34□□□□□ -0.59
SNORD88C-201ENST00000408061 UTP14CQ5TAP6 766 aaKnown RBP11.34□□□□□ -0.59
SNORD88C-201ENST00000408061 IER5Q5VY09 327 aa11.34□□□□□ -0.59
SNORD88C-201ENST00000408061 TRIM59Q8IWR1 403 aa11.34□□□□□ -0.59
SNORD88C-201ENST00000408061 NELFCDQ8IXH7 590 aa11.34□□□□□ -0.59
SNORD88C-201ENST00000408061 SYCP3Q8IZU3 236 aa11.34□□□□□ -0.59
SNORD88C-201ENST00000408061 ZNF397Q8NF99 534 aaPredicted RBP11.34□□□□□ -0.59
SNORD88C-201ENST00000408061 PPTC7Q8NI37 304 aa11.34□□□□□ -0.59
SNORD88C-201ENST00000408061 KIAA1524Q8TCG1 905 aa11.34□□□□□ -0.59
SNORD88C-201ENST00000408061 ATP8B4Q8TF62 1192 aa11.34□□□□□ -0.59
SNORD88C-201ENST00000408061 USP6NLQ92738 828 aa11.34□□□□□ -0.59
SNORD88C-201ENST00000408061 KATNBL1Q9H079 304 aa11.34□□□□□ -0.59
SNORD88C-201ENST00000408061 NUCKS1Q9H1E3 243 aaKnown RBP11.34□□□□□ -0.59
SNORD88C-201ENST00000408061 TMX1Q9H3N1 280 aa11.34□□□□□ -0.59
SNORD88C-201ENST00000408061 R3HDMLQ9H3Y0 253 aa11.34□□□□□ -0.59
SNORD88C-201ENST00000408061 DMAC2Q9NW81 257 aa11.34□□□□□ -0.59
SNORD88C-201ENST00000408061 TAB2Q9NYJ8 693 aa11.34□□□□□ -0.59
SNORD88C-201ENST00000408061 ERAP1Q9NZ08 941 aa11.34□□□□□ -0.59
SNORD88C-201ENST00000408061 ARMCX3Q9UH62 379 aaPredicted RBP11.34□□□□□ -0.59
SNORD88C-201ENST00000408061 FRMD4BQ9Y2L6 1034 aa11.34□□□□□ -0.59
SNORD88C-201ENST00000408061 COL1A2P08123 1366 aa11.33□□□□□ -0.6
SNORD88C-201ENST00000408061 A0A1W2PQJ5 194 aa11.33□□□□□ -0.6
SNORD88C-201ENST00000408061 GTPBP10A4D1E9 387 aaKnown RBP11.33□□□□□ -0.6
SNORD88C-201ENST00000408061 K7ENM7 598 aa11.33□□□□□ -0.6
SNORD88C-201ENST00000408061 MAGEB2O15479 319 aa11.33□□□□□ -0.6
SNORD88C-201ENST00000408061 TGFB1I1O43294 461 aa11.33□□□□□ -0.6
SNORD88C-201ENST00000408061 MAFO75444 373 aaPredicted RBP11.33□□□□□ -0.6
SNORD88C-201ENST00000408061 ARIH2O95376 493 aa11.33□□□□□ -0.6
SNORD88C-201ENST00000408061 SNAI1O95863 264 aaPredicted RBP11.33□□□□□ -0.6
SNORD88C-201ENST00000408061 SKILP12757 684 aa11.33□□□□□ -0.6
SNORD88C-201ENST00000408061 HOXD8P13378 290 aaPredicted RBP11.33□□□□□ -0.6
SNORD88C-201ENST00000408061 ATP4AP20648 1035 aa11.33□□□□□ -0.6
SNORD88C-201ENST00000408061 NMT1P30419 496 aaKnown RBP11.33□□□□□ -0.6
SNORD88C-201ENST00000408061 CLCN1P35523 988 aa11.33□□□□□ -0.6
SNORD88C-201ENST00000408061 NAMPTP43490 491 aa11.33□□□□□ -0.6
SNORD88C-201ENST00000408061 CASP5P51878 434 aa11.33□□□□□ -0.6
SNORD88C-201ENST00000408061 PEX3P56589 373 aa11.33□□□□□ -0.6
SNORD88C-201ENST00000408061 POU5F1BQ06416 359 aa11.33□□□□□ -0.6
SNORD88C-201ENST00000408061 ARHGAP1Q07960 439 aa11.33□□□□□ -0.6
SNORD88C-201ENST00000408061 MXD4Q14582 209 aaPredicted RBP11.33□□□□□ -0.6
SNORD88C-201ENST00000408061 ARID5BQ14865 1188 aa11.33□□□□□ -0.6
SNORD88C-201ENST00000408061 BRDTQ58F21 947 aaPredicted RBP11.33□□□□□ -0.6
SNORD88C-201ENST00000408061 ZNF484Q5JVG2 852 aa11.33□□□□□ -0.6
SNORD88C-201ENST00000408061 MIIPQ5JXC2 388 aa11.33□□□□□ -0.6
SNORD88C-201ENST00000408061 EEPD1Q7L9B9 569 aa11.33□□□□□ -0.6
SNORD88C-201ENST00000408061 CREBRFQ8IUR6 639 aa11.33□□□□□ -0.6
SNORD88C-201ENST00000408061 FBXO16Q8IX29 292 aaPredicted RBP11.33□□□□□ -0.6
SNORD88C-201ENST00000408061 GLIS3Q8NEA6 775 aa11.33□□□□□ -0.6
SNORD88C-201ENST00000408061 GLG1Q92896 1179 aa11.33□□□□□ -0.6
SNORD88C-201ENST00000408061 PCYT2Q99447 389 aa11.33□□□□□ -0.6
SNORD88C-201ENST00000408061 CFHR5Q9BXR6 569 aa11.33□□□□□ -0.6
SNORD88C-201ENST00000408061 BCAS3Q9H6U6 928 aa11.33□□□□□ -0.6
SNORD88C-201ENST00000408061 TMEM134Q9H6X4 195 aa11.33□□□□□ -0.6
SNORD88C-201ENST00000408061 KIAA1586Q9HCI6 787 aa11.33□□□□□ -0.6
SNORD88C-201ENST00000408061 KMT5AQ9NQR1 393 aa11.33□□□□□ -0.6
SNORD88C-201ENST00000408061 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.33□□□□□ -0.6
SNORD88C-201ENST00000408061 CPA4Q9UI42 421 aa11.33□□□□□ -0.6
SNORD88C-201ENST00000408061 CAPN11Q9UMQ6 739 aa11.33□□□□□ -0.6
SNORD88C-201ENST00000408061 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.33□□□□□ -0.6
SNORD88C-201ENST00000408061 UTRNP46939 3433 aa11.33□□□□□ -0.6
SNORD88C-201ENST00000408061 IGKV6-21A0A0C4DH24 114 aa11.32□□□□□ -0.6
SNORD88C-201ENST00000408061 ARHGAP6O43182 974 aa11.32□□□□□ -0.6
SNORD88C-201ENST00000408061 FECHP22830 423 aa11.32□□□□□ -0.6
SNORD88C-201ENST00000408061 ARL2P36404 184 aa11.32□□□□□ -0.6
SNORD88C-201ENST00000408061 NPTX2P47972 431 aa11.32□□□□□ -0.6
SNORD88C-201ENST00000408061 EFNA5P52803 228 aa11.32□□□□□ -0.6
SNORD88C-201ENST00000408061 CDC42EP1Q00587 391 aa11.32□□□□□ -0.6
SNORD88C-201ENST00000408061 SP4Q02446 784 aa11.32□□□□□ -0.6
SNORD88C-201ENST00000408061 EMC2Q15006 297 aa11.32□□□□□ -0.6
SNORD88C-201ENST00000408061 HSDL1Q3SXM5 330 aa11.32□□□□□ -0.6
SNORD88C-201ENST00000408061 MTERF2Q49AM1 385 aa11.32□□□□□ -0.6
SNORD88C-201ENST00000408061 PLA2G4FQ68DD2 849 aa11.32□□□□□ -0.6
SNORD88C-201ENST00000408061 ARMCX5Q6P1M9 558 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms