RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 FAM43BQ6ZT52 329 aaPredicted RBP21.66■■□□□ 1.06
SMARCB1-204ENST00000407422 SCLT1Q96NL6 688 aa21.66■■□□□ 1.06
SMARCB1-204ENST00000407422 PLVAPQ9BX97 442 aa21.66■■□□□ 1.06
SMARCB1-204ENST00000407422 BRMS1Q9HCU9 246 aa21.66■■□□□ 1.06
SMARCB1-204ENST00000407422 PLAGL2Q9UPG8 496 aa21.66■■□□□ 1.06
SMARCB1-204ENST00000407422 IGKV6-21A0A0C4DH24 114 aa21.65■■□□□ 1.06
SMARCB1-204ENST00000407422 TBX3O15119 743 aa21.65■■□□□ 1.06
SMARCB1-204ENST00000407422 MMP1P03956 469 aa21.65■■□□□ 1.06
SMARCB1-204ENST00000407422 FGFR1P11362 822 aa21.65■■□□□ 1.06
SMARCB1-204ENST00000407422 DARSP14868 501 aaKnown RBP21.65■■□□□ 1.06
SMARCB1-204ENST00000407422 QARSP47897 775 aaKnown RBP21.65■■□□□ 1.06
SMARCB1-204ENST00000407422 FAM189BP81408 668 aa21.65■■□□□ 1.06
SMARCB1-204ENST00000407422 CAMK1Q14012 370 aa21.65■■□□□ 1.06
SMARCB1-204ENST00000407422 NLRP7Q8WX94 980 aa21.65■■□□□ 1.06
SMARCB1-204ENST00000407422 NAP1L4Q99733 375 aaKnown RBP21.65■■□□□ 1.06
SMARCB1-204ENST00000407422 HCSTQ9UBK5 93 aa21.65■■□□□ 1.06
SMARCB1-204ENST00000407422 PLXNA4Q9HCM2 1894 aa21.65■■□□□ 1.06
SMARCB1-204ENST00000407422 TBKBP1A7MCY6 615 aa21.64■■□□□ 1.05
SMARCB1-204ENST00000407422 MARCH6O60337 910 aa21.64■■□□□ 1.05
SMARCB1-204ENST00000407422 ITGB1P05556 798 aa21.64■■□□□ 1.05
SMARCB1-204ENST00000407422 DNAJB1P25685 340 aa21.64■■□□□ 1.05
SMARCB1-204ENST00000407422 NPEPPSP55786 919 aa21.64■■□□□ 1.05
SMARCB1-204ENST00000407422 ZNF710Q8N1W2 664 aa21.64■■□□□ 1.05
SMARCB1-204ENST00000407422 ZNF579Q8NAF0 562 aaKnown RBP21.64■■□□□ 1.05
SMARCB1-204ENST00000407422 KLHL23Q8NBE8 558 aa21.64■■□□□ 1.05
SMARCB1-204ENST00000407422 LMAN2LQ9H0V9 348 aa21.64■■□□□ 1.05
SMARCB1-204ENST00000407422 WNT7AO00755 349 aa21.63■■□□□ 1.05
SMARCB1-204ENST00000407422 MAFO75444 373 aaPredicted RBP21.63■■□□□ 1.05
SMARCB1-204ENST00000407422 SPIRE1Q08AE8 756 aa21.63■■□□□ 1.05
SMARCB1-204ENST00000407422 C8orf34Q49A92 452 aa21.63■■□□□ 1.05
SMARCB1-204ENST00000407422 DIS3L2Q8IYB7 885 aaKnown RBP21.63■■□□□ 1.05
SMARCB1-204ENST00000407422 P2RX5Q93086 422 aa21.63■■□□□ 1.05
SMARCB1-204ENST00000407422 TMEM161AQ9NX61 479 aa21.63■■□□□ 1.05
SMARCB1-204ENST00000407422 RGL1Q9NZL6 768 aa21.63■■□□□ 1.05
SMARCB1-204ENST00000407422 LIMCH1Q9UPQ0 1083 aa21.63■■□□□ 1.05
SMARCB1-204ENST00000407422 P4HBP07237 508 aaKnown RBP21.62■■□□□ 1.05
SMARCB1-204ENST00000407422 NCAPH2Q6IBW4 605 aa21.62■■□□□ 1.05
SMARCB1-204ENST00000407422 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.62■■□□□ 1.05
SMARCB1-204ENST00000407422 SPPL3Q8TCT6 385 aa21.62■■□□□ 1.05
SMARCB1-204ENST00000407422 KIF2CQ99661 725 aa21.62■■□□□ 1.05
SMARCB1-204ENST00000407422 ATP6V0A4Q9HBG4 840 aa21.62■■□□□ 1.05
SMARCB1-204ENST00000407422 CYP26B1Q9NR63 512 aa21.62■■□□□ 1.05
SMARCB1-204ENST00000407422 SUCLA2Q9P2R7 463 aaPredicted RBP21.62■■□□□ 1.05
SMARCB1-204ENST00000407422 A0A087WZ62 844 aa21.62■■□□□ 1.05
SMARCB1-204ENST00000407422 H3BQ06 376 aaPredicted RBP21.62■■□□□ 1.05
SMARCB1-204ENST00000407422 ZSCAN20P17040 1043 aaPredicted RBP21.62■■□□□ 1.05
SMARCB1-204ENST00000407422 DNM2P50570 870 aa21.62■■□□□ 1.05
SMARCB1-204ENST00000407422 TRIM29Q14134 588 aa21.62■■□□□ 1.05
SMARCB1-204ENST00000407422 COL19A1Q14993 1142 aa21.62■■□□□ 1.05
SMARCB1-204ENST00000407422 EPHA7Q15375 998 aa21.62■■□□□ 1.05
SMARCB1-204ENST00000407422 LEXMQ3ZCV2 418 aa21.62■■□□□ 1.05
SMARCB1-204ENST00000407422 EP400NLQ6ZTU2 488 aa21.62■■□□□ 1.05
SMARCB1-204ENST00000407422 RHPN2Q8IUC4 686 aa21.62■■□□□ 1.05
SMARCB1-204ENST00000407422 KSR1Q8IVT5 923 aa21.62■■□□□ 1.05
SMARCB1-204ENST00000407422 CCDC83Q8IWF9 413 aa21.62■■□□□ 1.05
SMARCB1-204ENST00000407422 PABPC5Q96DU9 382 aaKnown RBP21.62■■□□□ 1.05
SMARCB1-204ENST00000407422 FDXACB1Q9BRP7 624 aaPredicted RBP21.62■■□□□ 1.05
SMARCB1-204ENST00000407422 LXNQ9BS40 222 aa21.62■■□□□ 1.05
SMARCB1-204ENST00000407422 ELAC1Q9H777 363 aaKnown RBP21.62■■□□□ 1.05
SMARCB1-204ENST00000407422 RNF216Q9NWF9 866 aaPredicted RBP21.62■■□□□ 1.05
SMARCB1-204ENST00000407422 ZBTB39O15060 712 aa21.61■■□□□ 1.05
SMARCB1-204ENST00000407422 GUCY1B3Q02153 619 aa21.61■■□□□ 1.05
SMARCB1-204ENST00000407422 NAALADL2Q58DX5 795 aa21.61■■□□□ 1.05
SMARCB1-204ENST00000407422 SPOUT1Q5T280 376 aaKnown RBP21.61■■□□□ 1.05
SMARCB1-204ENST00000407422 ARID2Q68CP9 1835 aa21.61■■□□□ 1.05
SMARCB1-204ENST00000407422 SLFN12Q8IYM2 578 aa21.61■■□□□ 1.05
SMARCB1-204ENST00000407422 NEK9Q8TD19 979 aa21.61■■□□□ 1.05
SMARCB1-204ENST00000407422 DYDC2Q96IM9 177 aa21.61■■□□□ 1.05
SMARCB1-204ENST00000407422 CEP170P1Q96L14 293 aa21.61■■□□□ 1.05
SMARCB1-204ENST00000407422 GCOM2Q9BZD3 368 aaPredicted RBP21.61■■□□□ 1.05
SMARCB1-204ENST00000407422 RNF19AQ9NV58 838 aa21.61■■□□□ 1.05
SMARCB1-204ENST00000407422 TYW1Q9NV66 732 aaKnown RBP21.61■■□□□ 1.05
SMARCB1-204ENST00000407422 BAG4O95429 457 aaKnown RBP21.6■■□□□ 1.05
SMARCB1-204ENST00000407422 GTF2F1P35269 517 aaKnown RBP eCLIP21.6■■□□□ 1.05
SMARCB1-204ENST00000407422 IRS1P35568 1242 aa21.6■■□□□ 1.05
SMARCB1-204ENST00000407422 CYP4A11Q02928 519 aa21.6■■□□□ 1.05
SMARCB1-204ENST00000407422 HYAL1Q12794 435 aa21.6■■□□□ 1.05
SMARCB1-204ENST00000407422 CTTNQ14247 550 aaKnown RBP21.6■■□□□ 1.05
SMARCB1-204ENST00000407422 ECHDC2Q86YB7 292 aa21.6■■□□□ 1.05
SMARCB1-204ENST00000407422 POF1BQ8WVV4 589 aa21.6■■□□□ 1.05
SMARCB1-204ENST00000407422 CLDND1Q9NY35 253 aa21.6■■□□□ 1.05
SMARCB1-204ENST00000407422 DKC1O60832 514 aaKnown RBP eCLIP21.59■■□□□ 1.05
SMARCB1-204ENST00000407422 CDC42EP1Q00587 391 aa21.59■■□□□ 1.05
SMARCB1-204ENST00000407422 CALCRLQ16602 461 aa21.59■■□□□ 1.05
SMARCB1-204ENST00000407422 C4orf19Q8IY42 314 aa21.59■■□□□ 1.05
SMARCB1-204ENST00000407422 RNF169Q8NCN4 708 aa21.59■■□□□ 1.05
SMARCB1-204ENST00000407422 NLRP4Q96MN2 994 aa21.59■■□□□ 1.05
SMARCB1-204ENST00000407422 BMP2KQ9NSY1 1161 aaPredicted RBP21.59■■□□□ 1.05
SMARCB1-204ENST00000407422 YWHABP31946 246 aaKnown RBP21.58■■□□□ 1.05
SMARCB1-204ENST00000407422 LTBRP36941 435 aa21.58■■□□□ 1.05
SMARCB1-204ENST00000407422 PTCRAQ6ISU1 281 aaPredicted RBP21.58■■□□□ 1.05
SMARCB1-204ENST00000407422 LRRC55Q6ZSA7 311 aa21.58■■□□□ 1.05
SMARCB1-204ENST00000407422 CASD1Q96PB1 797 aa21.58■■□□□ 1.05
SMARCB1-204ENST00000407422 CWH43Q9H720 699 aa21.58■■□□□ 1.05
SMARCB1-204ENST00000407422 PCDHA12Q9UN75 941 aa21.58■■□□□ 1.05
SMARCB1-204ENST00000407422 PCDHB12Q9Y5F1 795 aa21.58■■□□□ 1.05
SMARCB1-204ENST00000407422 PCDHGC5Q9Y5F6 944 aa21.58■■□□□ 1.05
SMARCB1-204ENST00000407422 SLITRK3O94933 977 aa21.58■■□□□ 1.04
SMARCB1-204ENST00000407422 IL9P15248 144 aa21.58■■□□□ 1.04
SMARCB1-204ENST00000407422 CTC1Q2NKJ3 1217 aa21.58■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms