RNA–Protein interactions for RNA: ENST00000405925.2

LIG4-202, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-202ENST00000405925 EFNA5P52803 228 aa9.86□□□□□ -0.83
LIG4-202ENST00000405925 ERVK-9P63128 1117 aa9.86□□□□□ -0.83
LIG4-202ENST00000405925 ERVK-24P63145 666 aa9.86□□□□□ -0.83
LIG4-202ENST00000405925 DLK2Q6UY11 383 aa9.86□□□□□ -0.83
LIG4-202ENST00000405925 RDM1Q8NG50 284 aa9.86□□□□□ -0.83
LIG4-202ENST00000405925 RUSC1Q9BVN2 902 aa9.86□□□□□ -0.83
LIG4-202ENST00000405925 GPRC5CQ9NQ84 441 aa9.86□□□□□ -0.83
LIG4-202ENST00000405925 ANKEF1Q9NU02 776 aa9.86□□□□□ -0.83
LIG4-202ENST00000405925 RBAKQ9NYW8 714 aaPredicted RBP9.86□□□□□ -0.83
LIG4-202ENST00000405925 AMFRQ9UKV5 643 aa9.86□□□□□ -0.83
LIG4-202ENST00000405925 KCNH4Q9UQ05 1017 aa9.86□□□□□ -0.83
LIG4-202ENST00000405925 PITPNM2Q9BZ72 1349 aa9.86□□□□□ -0.83
LIG4-202ENST00000405925 OATP04181 439 aa9.86□□□□□ -0.83
LIG4-202ENST00000405925 PLS3P13797 630 aa9.86□□□□□ -0.83
LIG4-202ENST00000405925 POLR2BP30876 1174 aaKnown RBP9.86□□□□□ -0.83
LIG4-202ENST00000405925 LMBRD2Q68DH5 695 aaPredicted RBP9.86□□□□□ -0.83
LIG4-202ENST00000405925 NAP1L3Q99457 506 aaPredicted RBP9.86□□□□□ -0.83
LIG4-202ENST00000405925 KIFC3Q9BVG8 833 aa9.86□□□□□ -0.83
LIG4-202ENST00000405925 TIPINQ9BVW5 301 aa9.86□□□□□ -0.83
LIG4-202ENST00000405925 KCND2Q9NZV8 630 aa9.86□□□□□ -0.83
LIG4-202ENST00000405925 PRKAG2Q9UGJ0 569 aa9.86□□□□□ -0.83
LIG4-202ENST00000405925 DNAJC12Q9UKB3 198 aa9.86□□□□□ -0.83
LIG4-202ENST00000405925 RIOK3O14730 519 aaKnown RBP9.85□□□□□ -0.83
LIG4-202ENST00000405925 HBP1O60381 514 aa9.85□□□□□ -0.83
LIG4-202ENST00000405925 CSPG5O95196 566 aa9.85□□□□□ -0.83
LIG4-202ENST00000405925 RARBP10826 455 aa9.85□□□□□ -0.83
LIG4-202ENST00000405925 MYO1EQ12965 1108 aa9.85□□□□□ -0.83
LIG4-202ENST00000405925 Q4G0T1 1027 aa9.85□□□□□ -0.83
LIG4-202ENST00000405925 ZNF667Q5HYK9 610 aa9.85□□□□□ -0.83
LIG4-202ENST00000405925 CHADLQ6NUI6 762 aa9.85□□□□□ -0.83
LIG4-202ENST00000405925 C7orf43Q8WVR3 580 aa9.85□□□□□ -0.83
LIG4-202ENST00000405925 MEIS2O14770 477 aa9.85□□□□□ -0.83
LIG4-202ENST00000405925 VAV2P52735 878 aa9.85□□□□□ -0.83
LIG4-202ENST00000405925 FAM149B1Q96BN6 582 aa9.85□□□□□ -0.83
LIG4-202ENST00000405925 PURBQ96QR8 312 aaKnown RBP9.85□□□□□ -0.83
LIG4-202ENST00000405925 SNX25Q9H3E2 840 aa9.85□□□□□ -0.83
LIG4-202ENST00000405925 AGO4Q9HCK5 861 aaKnown RBP9.85□□□□□ -0.83
LIG4-202ENST00000405925 SPDYE16A6NNV3 312 aaPredicted RBP9.85□□□□□ -0.83
LIG4-202ENST00000405925 DYNC1I1O14576 645 aa9.85□□□□□ -0.83
LIG4-202ENST00000405925 CAPN9O14815 690 aa9.85□□□□□ -0.83
LIG4-202ENST00000405925 DAPK3O43293 454 aa9.85□□□□□ -0.83
LIG4-202ENST00000405925 SLC26A4O43511 780 aa9.85□□□□□ -0.83
LIG4-202ENST00000405925 ABL1P00519 1130 aa9.85□□□□□ -0.83
LIG4-202ENST00000405925 ADORA2AP29274 412 aa9.85□□□□□ -0.83
LIG4-202ENST00000405925 ACOT2P49753 483 aa9.85□□□□□ -0.83
LIG4-202ENST00000405925 MXD4Q14582 209 aaPredicted RBP9.85□□□□□ -0.83
LIG4-202ENST00000405925 DGKDQ16760 1214 aa9.85□□□□□ -0.83
LIG4-202ENST00000405925 C8orf74Q6P047 294 aa9.85□□□□□ -0.83
LIG4-202ENST00000405925 SCYL2Q6P3W7 929 aa9.85□□□□□ -0.83
LIG4-202ENST00000405925 CCDC25Q86WR0 208 aa9.85□□□□□ -0.83
LIG4-202ENST00000405925 KLHL7Q8IXQ5 586 aa9.85□□□□□ -0.83
LIG4-202ENST00000405925 DNERQ8NFT8 737 aa9.85□□□□□ -0.83
LIG4-202ENST00000405925 ZNF653Q96CK0 615 aa9.85□□□□□ -0.83
LIG4-202ENST00000405925 SAR1BQ9Y6B6 198 aa9.85□□□□□ -0.83
LIG4-202ENST00000405925 EMSYQ7Z589 1322 aa9.85□□□□□ -0.83
LIG4-202ENST00000405925 KCNK3O14649 394 aa9.84□□□□□ -0.83
LIG4-202ENST00000405925 MAGEB2O15479 319 aa9.84□□□□□ -0.83
LIG4-202ENST00000405925 SUPT20HL2P0C7V6 817 aa9.84□□□□□ -0.83
LIG4-202ENST00000405925 CYP2C9P11712 490 aa9.84□□□□□ -0.83
LIG4-202ENST00000405925 BFSP1Q12934 665 aa9.84□□□□□ -0.83
LIG4-202ENST00000405925 NKX2-3Q8TAU0 364 aa9.84□□□□□ -0.83
LIG4-202ENST00000405925 TRIM31Q9BZY9 425 aa9.84□□□□□ -0.83
LIG4-202ENST00000405925 KBTBD4Q9NVX7 518 aa9.84□□□□□ -0.83
LIG4-202ENST00000405925 PHLPP2Q6ZVD8 1323 aa9.84□□□□□ -0.83
LIG4-202ENST00000405925 GOLGA8SH3BPF8 625 aa9.84□□□□□ -0.83
LIG4-202ENST00000405925 NDUFA10O95299 355 aa9.84□□□□□ -0.83
LIG4-202ENST00000405925 CIITAP33076 1130 aa9.84□□□□□ -0.83
LIG4-202ENST00000405925 ALDH5A1P51649 535 aaPredicted RBP9.84□□□□□ -0.83
LIG4-202ENST00000405925 KIF11P52732 1056 aa9.84□□□□□ -0.83
LIG4-202ENST00000405925 CALCOCO2Q13137 446 aa9.84□□□□□ -0.83
LIG4-202ENST00000405925 MESDQ14696 234 aa9.84□□□□□ -0.83
LIG4-202ENST00000405925 TMEM132BQ14DG7 1078 aa9.84□□□□□ -0.83
LIG4-202ENST00000405925 EFCAB12Q6NXP0 572 aa9.84□□□□□ -0.83
LIG4-202ENST00000405925 BTNL9Q6UXG8 535 aa9.84□□□□□ -0.83
LIG4-202ENST00000405925 GPD1LQ8N335 351 aa9.84□□□□□ -0.83
LIG4-202ENST00000405925 AFG1LQ8WV93 481 aa9.84□□□□□ -0.83
LIG4-202ENST00000405925 FAM81BQ96LP2 452 aa9.84□□□□□ -0.83
LIG4-202ENST00000405925 NHEJ1Q9H9Q4 299 aaPredicted RBP9.84□□□□□ -0.83
LIG4-202ENST00000405925 NMRK2Q9NPI5 230 aa9.84□□□□□ -0.83
LIG4-202ENST00000405925 C4BP0C0L5 1744 aa9.84□□□□□ -0.83
LIG4-202ENST00000405925 TTC26A0AVF1 554 aa9.84□□□□□ -0.83
LIG4-202ENST00000405925 MYO1FO00160 1098 aa9.84□□□□□ -0.83
LIG4-202ENST00000405925 SNHG28P0DPA3 235 aa9.84□□□□□ -0.83
LIG4-202ENST00000405925 PSMC6P62333 389 aa9.84□□□□□ -0.83
LIG4-202ENST00000405925 CCDC144BQ3MJ40 725 aa9.84□□□□□ -0.83
LIG4-202ENST00000405925 KRT39Q6A163 491 aa9.84□□□□□ -0.83
LIG4-202ENST00000405925 DYDC1Q8WWB3 177 aa9.84□□□□□ -0.83
LIG4-202ENST00000405925 KATNAL1Q9BW62 490 aa9.84□□□□□ -0.83
LIG4-202ENST00000405925 TARS2Q9BW92 718 aaKnown RBP9.84□□□□□ -0.83
LIG4-202ENST00000405925 CYP26B1Q9NR63 512 aa9.84□□□□□ -0.83
LIG4-202ENST00000405925 HSPBP1Q9NZL4 362 aa9.84□□□□□ -0.83
LIG4-202ENST00000405925 PIN4Q9Y237 131 aaKnown RBP9.84□□□□□ -0.83
LIG4-202ENST00000405925 GLI3P10071 1580 aa9.84□□□□□ -0.83
LIG4-202ENST00000405925 LRRC53A6NM62 1247 aa9.83□□□□□ -0.84
LIG4-202ENST00000405925 STRNO43815 780 aa9.83□□□□□ -0.84
LIG4-202ENST00000405925 SERPING1P05155 500 aa9.83□□□□□ -0.84
LIG4-202ENST00000405925 RFC5P40937 340 aa9.83□□□□□ -0.84
LIG4-202ENST00000405925 EHHADHQ08426 723 aa9.83□□□□□ -0.84
LIG4-202ENST00000405925 LY6KQ17RY6 165 aa9.83□□□□□ -0.84
LIG4-202ENST00000405925 ZNF699Q32M78 642 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms