RNA–Protein interactions for RNA: ENST00000404424.5

CLIP4-204, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP4, Length 2,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-204ENST00000404424 SUGP1Q8IWZ8 645 aaKnown RBP11.67□□□□□ -0.54
CLIP4-204ENST00000404424 ZNF473Q8WTR7 871 aaKnown RBP11.67□□□□□ -0.54
CLIP4-204ENST00000404424 CTNNBL1Q8WYA6 563 aaPredicted RBP11.67□□□□□ -0.54
CLIP4-204ENST00000404424 GJD4Q96KN9 370 aaPredicted RBP11.67□□□□□ -0.54
CLIP4-204ENST00000404424 AMACRQ9UHK6 382 aa11.67□□□□□ -0.54
CLIP4-204ENST00000404424 DNAJC12Q9UKB3 198 aa11.67□□□□□ -0.54
CLIP4-204ENST00000404424 ODF2LQ9ULJ1 636 aa11.67□□□□□ -0.54
CLIP4-204ENST00000404424 ADAMTSL1Q8N6G6 1762 aa11.67□□□□□ -0.54
CLIP4-204ENST00000404424 FAM196BA6NMK8 535 aa11.66□□□□□ -0.54
CLIP4-204ENST00000404424 OPLAHO14841 1288 aa11.66□□□□□ -0.54
CLIP4-204ENST00000404424 ZNF131P52739 623 aa11.66□□□□□ -0.54
CLIP4-204ENST00000404424 POU5F1Q01860 360 aaKnown RBP11.66□□□□□ -0.54
CLIP4-204ENST00000404424 ZNF844Q08AG5 666 aa11.66□□□□□ -0.54
CLIP4-204ENST00000404424 DRAP1Q14919 205 aaPredicted RBP11.66□□□□□ -0.54
CLIP4-204ENST00000404424 SH3BP5LQ7L8J4 393 aa11.66□□□□□ -0.54
CLIP4-204ENST00000404424 ZNF720Q7Z2F6 126 aa11.66□□□□□ -0.54
CLIP4-204ENST00000404424 DNAAF5Q86Y56 855 aa11.66□□□□□ -0.54
CLIP4-204ENST00000404424 OTUD6BQ8N6M0 293 aa11.66□□□□□ -0.54
CLIP4-204ENST00000404424 OLIG1Q8TAK6 271 aa11.66□□□□□ -0.54
CLIP4-204ENST00000404424 SLC35G2Q8TBE7 412 aa11.66□□□□□ -0.54
CLIP4-204ENST00000404424 MYCBPAPQ8TBZ2 947 aa11.66□□□□□ -0.54
CLIP4-204ENST00000404424 CCT8L2Q96SF2 557 aa11.66□□□□□ -0.54
CLIP4-204ENST00000404424 SYT11Q9BT88 431 aa11.66□□□□□ -0.54
CLIP4-204ENST00000404424 RAB17Q9H0T7 212 aa11.66□□□□□ -0.54
CLIP4-204ENST00000404424 CARD9Q9H257 536 aa11.66□□□□□ -0.54
CLIP4-204ENST00000404424 NEUROG2Q9H2A3 272 aa11.66□□□□□ -0.54
CLIP4-204ENST00000404424 DMAC2Q9NW81 257 aa11.66□□□□□ -0.54
CLIP4-204ENST00000404424 FRMPD4Q14CM0 1322 aa11.66□□□□□ -0.54
CLIP4-204ENST00000404424 VGLL3A8MV65 326 aa11.66□□□□□ -0.54
CLIP4-204ENST00000404424 DAPK3O43293 454 aa11.66□□□□□ -0.54
CLIP4-204ENST00000404424 ONECUT3O60422 494 aaPredicted RBP11.66□□□□□ -0.54
CLIP4-204ENST00000404424 PSMD10O75832 226 aa11.66□□□□□ -0.54
CLIP4-204ENST00000404424 ITGA4P13612 1032 aa11.66□□□□□ -0.54
CLIP4-204ENST00000404424 NMT1P30419 496 aaKnown RBP11.66□□□□□ -0.54
CLIP4-204ENST00000404424 SNAP25P60880 206 aa11.66□□□□□ -0.54
CLIP4-204ENST00000404424 SHROOM1Q2M3G4 852 aaPredicted RBP11.66□□□□□ -0.54
CLIP4-204ENST00000404424 STRIP1Q5VSL9 837 aa11.66□□□□□ -0.54
CLIP4-204ENST00000404424 ICE2Q659A1 982 aa11.66□□□□□ -0.54
CLIP4-204ENST00000404424 MMS22LQ6ZRQ5 1243 aa11.66□□□□□ -0.54
CLIP4-204ENST00000404424 TMC3Q7Z5M5 1100 aa11.66□□□□□ -0.54
CLIP4-204ENST00000404424 DDX42Q86XP3 938 aaKnown RBP eCLIP11.66□□□□□ -0.54
CLIP4-204ENST00000404424 GLYCTKQ8IVS8 523 aa11.66□□□□□ -0.54
CLIP4-204ENST00000404424 TPH2Q8IWU9 490 aa11.66□□□□□ -0.54
CLIP4-204ENST00000404424 CYP2W1Q8TAV3 490 aa11.66□□□□□ -0.54
CLIP4-204ENST00000404424 PIGOQ8TEQ8 1089 aa11.66□□□□□ -0.54
CLIP4-204ENST00000404424 UBLCP1Q8WVY7 318 aaPredicted RBP11.66□□□□□ -0.54
CLIP4-204ENST00000404424 VTI1AQ96AJ9 217 aa11.66□□□□□ -0.54
CLIP4-204ENST00000404424 ANKRD62A6NC57 917 aa11.65□□□□□ -0.54
CLIP4-204ENST00000404424 SFI1A8K8P3 1242 aa11.65□□□□□ -0.54
CLIP4-204ENST00000404424 DDX3YO15523 660 aaKnown RBP11.65□□□□□ -0.54
CLIP4-204ENST00000404424 TTI1O43156 1089 aa11.65□□□□□ -0.54
CLIP4-204ENST00000404424 BUB1BO60566 1050 aaPredicted RBP11.65□□□□□ -0.54
CLIP4-204ENST00000404424 TRIM37O94972 964 aa11.65□□□□□ -0.54
CLIP4-204ENST00000404424 HOXA13P31271 388 aaPredicted RBP11.65□□□□□ -0.54
CLIP4-204ENST00000404424 CACNB3P54284 484 aa11.65□□□□□ -0.54
CLIP4-204ENST00000404424 EIF3BP55884 814 aaKnown RBP11.65□□□□□ -0.54
CLIP4-204ENST00000404424 CTTNQ14247 550 aaKnown RBP11.65□□□□□ -0.54
CLIP4-204ENST00000404424 MYBPC2Q14324 1141 aa11.65□□□□□ -0.54
CLIP4-204ENST00000404424 PLS1Q14651 629 aa11.65□□□□□ -0.54
CLIP4-204ENST00000404424 RBM26Q5T8P6 1007 aaKnown RBP11.65□□□□□ -0.54
CLIP4-204ENST00000404424 LRCH2Q5VUJ6 765 aa11.65□□□□□ -0.54
CLIP4-204ENST00000404424 SLC9A9Q8IVB4 645 aa11.65□□□□□ -0.54
CLIP4-204ENST00000404424 DYDC2Q96IM9 177 aa11.65□□□□□ -0.54
CLIP4-204ENST00000404424 NACC1Q96RE7 527 aa11.65□□□□□ -0.54
CLIP4-204ENST00000404424 FIZ1Q96SL8 496 aa11.65□□□□□ -0.54
CLIP4-204ENST00000404424 APEX2Q9UBZ4 518 aa11.65□□□□□ -0.54
CLIP4-204ENST00000404424 SLC12A6Q9UHW9 1150 aa11.65□□□□□ -0.54
CLIP4-204ENST00000404424 GOLGA6L10A0A0M3HER8 536 aa11.65□□□□□ -0.54
CLIP4-204ENST00000404424 MYO1FO00160 1098 aa11.65□□□□□ -0.54
CLIP4-204ENST00000404424 FSBPO95073 299 aa11.65□□□□□ -0.54
CLIP4-204ENST00000404424 GDF11O95390 407 aa11.65□□□□□ -0.54
CLIP4-204ENST00000404424 FGGP02679 453 aa11.65□□□□□ -0.54
CLIP4-204ENST00000404424 TNFAIP3P21580 790 aa11.65□□□□□ -0.54
CLIP4-204ENST00000404424 HPDP32754 393 aaPredicted RBP11.65□□□□□ -0.54
CLIP4-204ENST00000404424 USP8P40818 1118 aa11.65□□□□□ -0.54
CLIP4-204ENST00000404424 PRELPP51888 382 aa11.65□□□□□ -0.54
CLIP4-204ENST00000404424 RBM5P52756 815 aaKnown RBP eCLIP11.65□□□□□ -0.54
CLIP4-204ENST00000404424 PTENP60484 403 aa11.65□□□□□ -0.54
CLIP4-204ENST00000404424 PTPROQ16827 1216 aa11.65□□□□□ -0.54
CLIP4-204ENST00000404424 KIAA0825Q8IV33 1275 aa11.65□□□□□ -0.54
CLIP4-204ENST00000404424 RHOT2Q8IXI1 618 aa11.65□□□□□ -0.54
CLIP4-204ENST00000404424 FAM178BQ8IXR5 827 aa11.65□□□□□ -0.54
CLIP4-204ENST00000404424 SLC5A5Q92911 643 aa11.65□□□□□ -0.54
CLIP4-204ENST00000404424 GPR88Q9GZN0 384 aa11.65□□□□□ -0.54
CLIP4-204ENST00000404424 CENPHQ9H3R5 247 aa11.65□□□□□ -0.54
CLIP4-204ENST00000404424 BCAS3Q9H6U6 928 aa11.65□□□□□ -0.54
CLIP4-204ENST00000404424 EHMT1Q9H9B1 1298 aa11.65□□□□□ -0.54
CLIP4-204ENST00000404424 OSGEPQ9NPF4 335 aa11.65□□□□□ -0.54
CLIP4-204ENST00000404424 AGPAT3Q9NRZ7 376 aa11.65□□□□□ -0.54
CLIP4-204ENST00000404424 SERPINA10Q9UK55 444 aa11.65□□□□□ -0.54
CLIP4-204ENST00000404424 PRR12Q9ULL5 1215 aa11.65□□□□□ -0.54
CLIP4-204ENST00000404424 SPATA31A6Q5VVP1 1343 aa11.64□□□□□ -0.55
CLIP4-204ENST00000404424 FAM187AA6NFU0 413 aa11.64□□□□□ -0.55
CLIP4-204ENST00000404424 E7EVH7 732 aa11.64□□□□□ -0.55
CLIP4-204ENST00000404424 HADHBP55084 474 aaKnown RBP11.64□□□□□ -0.55
CLIP4-204ENST00000404424 PPP2R2AP63151 447 aa11.64□□□□□ -0.55
CLIP4-204ENST00000404424 ZC2HC1CQ53FD0 456 aaPredicted RBP11.64□□□□□ -0.55
CLIP4-204ENST00000404424 ARMC9Q7Z3E5 817 aa11.64□□□□□ -0.55
CLIP4-204ENST00000404424 WDR18Q9BV38 432 aa11.64□□□□□ -0.55
CLIP4-204ENST00000404424 INTS2Q9H0H0 1204 aaKnown RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms