RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 PLAGL2Q9UPG8 496 aa17.27■□□□□ 0.36
TPM1-207ENST00000403994 IGKV6-21A0A0C4DH24 114 aa17.26■□□□□ 0.35
TPM1-207ENST00000403994 TBKBP1A7MCY6 615 aa17.26■□□□□ 0.35
TPM1-207ENST00000403994 JAK2O60674 1132 aa17.26■□□□□ 0.35
TPM1-207ENST00000403994 DARSP14868 501 aaKnown RBP17.26■□□□□ 0.35
TPM1-207ENST00000403994 PSMC5P62195 406 aa17.26■□□□□ 0.35
TPM1-207ENST00000403994 ST3GAL1Q11201 340 aa17.26■□□□□ 0.35
TPM1-207ENST00000403994 CAMK1Q14012 370 aa17.26■□□□□ 0.35
TPM1-207ENST00000403994 FAM102BQ5T8I3 360 aa17.26■□□□□ 0.35
TPM1-207ENST00000403994 PLA2G4FQ68DD2 849 aa17.26■□□□□ 0.35
TPM1-207ENST00000403994 ANO5Q75V66 913 aa17.26■□□□□ 0.35
TPM1-207ENST00000403994 NEK9Q8TD19 979 aa17.26■□□□□ 0.35
TPM1-207ENST00000403994 NLRP7Q8WX94 980 aa17.26■□□□□ 0.35
TPM1-207ENST00000403994 HAS1Q92839 578 aa17.26■□□□□ 0.35
TPM1-207ENST00000403994 PABPC5Q96DU9 382 aaKnown RBP17.26■□□□□ 0.35
TPM1-207ENST00000403994 NAP1L4Q99733 375 aaKnown RBP17.26■□□□□ 0.35
TPM1-207ENST00000403994 BRMS1Q9HCU9 246 aa17.26■□□□□ 0.35
TPM1-207ENST00000403994 RNF216Q9NWF9 866 aaPredicted RBP17.26■□□□□ 0.35
TPM1-207ENST00000403994 TMEM161AQ9NX61 479 aa17.26■□□□□ 0.35
TPM1-207ENST00000403994 HCSTQ9UBK5 93 aa17.26■□□□□ 0.35
TPM1-207ENST00000403994 H3BQ06 376 aaPredicted RBP17.25■□□□□ 0.35
TPM1-207ENST00000403994 TBX3O15119 743 aa17.25■□□□□ 0.35
TPM1-207ENST00000403994 FGFR1P11362 822 aa17.25■□□□□ 0.35
TPM1-207ENST00000403994 DNAJB1P25685 340 aa17.25■□□□□ 0.35
TPM1-207ENST00000403994 HYAL1Q12794 435 aa17.25■□□□□ 0.35
TPM1-207ENST00000403994 NAALADL2Q58DX5 795 aa17.25■□□□□ 0.35
TPM1-207ENST00000403994 KLHL23Q8NBE8 558 aa17.25■□□□□ 0.35
TPM1-207ENST00000403994 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.25■□□□□ 0.35
TPM1-207ENST00000403994 ELAC1Q9H777 363 aaKnown RBP17.25■□□□□ 0.35
TPM1-207ENST00000403994 WRAP73Q9P2S5 460 aaPredicted RBP17.25■□□□□ 0.35
TPM1-207ENST00000403994 DDX11L8A8MPP1 907 aa17.24■□□□□ 0.35
TPM1-207ENST00000403994 MAFO75444 373 aaPredicted RBP17.24■□□□□ 0.35
TPM1-207ENST00000403994 FGFR4P22455 802 aa17.24■□□□□ 0.35
TPM1-207ENST00000403994 QARSP47897 775 aaKnown RBP17.24■□□□□ 0.35
TPM1-207ENST00000403994 FOSBP53539 338 aa17.24■□□□□ 0.35
TPM1-207ENST00000403994 FAM189BP81408 668 aa17.24■□□□□ 0.35
TPM1-207ENST00000403994 SPIRE1Q08AE8 756 aa17.24■□□□□ 0.35
TPM1-207ENST00000403994 PTCRAQ6ISU1 281 aaPredicted RBP17.24■□□□□ 0.35
TPM1-207ENST00000403994 SPPL3Q8TCT6 385 aa17.24■□□□□ 0.35
TPM1-207ENST00000403994 LXNQ9BS40 222 aa17.24■□□□□ 0.35
TPM1-207ENST00000403994 ATP6V0A4Q9HBG4 840 aa17.24■□□□□ 0.35
TPM1-207ENST00000403994 RNF19AQ9NV58 838 aa17.24■□□□□ 0.35
TPM1-207ENST00000403994 CLDND1Q9NY35 253 aa17.24■□□□□ 0.35
TPM1-207ENST00000403994 CSDE1O75534 798 aaKnown RBP17.23■□□□□ 0.35
TPM1-207ENST00000403994 IL9P15248 144 aa17.23■□□□□ 0.35
TPM1-207ENST00000403994 CTC1Q2NKJ3 1217 aa17.23■□□□□ 0.35
TPM1-207ENST00000403994 EP400NLQ6ZTU2 488 aa17.23■□□□□ 0.35
TPM1-207ENST00000403994 CYP26B1Q9NR63 512 aa17.23■□□□□ 0.35
TPM1-207ENST00000403994 WNT7AO00755 349 aa17.22■□□□□ 0.35
TPM1-207ENST00000403994 HOXA2O43364 376 aa17.22■□□□□ 0.35
TPM1-207ENST00000403994 NCK2O43639 380 aa17.22■□□□□ 0.35
TPM1-207ENST00000403994 TBX10O75333 385 aa17.22■□□□□ 0.35
TPM1-207ENST00000403994 P4HBP07237 508 aaKnown RBP17.22■□□□□ 0.35
TPM1-207ENST00000403994 ZSCAN20P17040 1043 aaPredicted RBP17.22■□□□□ 0.35
TPM1-207ENST00000403994 ATF7P17544 494 aaPredicted RBP17.22■□□□□ 0.35
TPM1-207ENST00000403994 GTF2F1P35269 517 aaKnown RBP eCLIP17.22■□□□□ 0.35
TPM1-207ENST00000403994 IRS1P35568 1242 aa17.22■□□□□ 0.35
TPM1-207ENST00000403994 LTBRP36941 435 aa17.22■□□□□ 0.35
TPM1-207ENST00000403994 DNM2P50570 870 aa17.22■□□□□ 0.35
TPM1-207ENST00000403994 NPEPPSP55786 919 aa17.22■□□□□ 0.35
TPM1-207ENST00000403994 SPOUT1Q5T280 376 aaKnown RBP17.22■□□□□ 0.35
TPM1-207ENST00000403994 NCAPH2Q6IBW4 605 aa17.22■□□□□ 0.35
TPM1-207ENST00000403994 ZNF410Q86VK4 478 aa17.22■□□□□ 0.35
TPM1-207ENST00000403994 ECHDC2Q86YB7 292 aa17.22■□□□□ 0.35
TPM1-207ENST00000403994 RHPN2Q8IUC4 686 aa17.22■□□□□ 0.35
TPM1-207ENST00000403994 DIS3L2Q8IYB7 885 aaKnown RBP17.22■□□□□ 0.35
TPM1-207ENST00000403994 SLFN12Q8IYM2 578 aa17.22■□□□□ 0.35
TPM1-207ENST00000403994 COLGALT1Q8NBJ5 622 aa17.22■□□□□ 0.35
TPM1-207ENST00000403994 POF1BQ8WVV4 589 aa17.22■□□□□ 0.35
TPM1-207ENST00000403994 GCOM2Q9BZD3 368 aaPredicted RBP17.22■□□□□ 0.35
TPM1-207ENST00000403994 TMEM117Q9H0C3 514 aa17.22■□□□□ 0.35
TPM1-207ENST00000403994 CWH43Q9H720 699 aa17.22■□□□□ 0.35
TPM1-207ENST00000403994 TYW1Q9NV66 732 aaKnown RBP17.22■□□□□ 0.35
TPM1-207ENST00000403994 SUCLA2Q9P2R7 463 aaPredicted RBP17.22■□□□□ 0.35
TPM1-207ENST00000403994 A0A087WZ62 844 aa17.21■□□□□ 0.35
TPM1-207ENST00000403994 GRXCR2A6NFK2 248 aa17.21■□□□□ 0.35
TPM1-207ENST00000403994 BTBD18B2RXH4 712 aa17.21■□□□□ 0.35
TPM1-207ENST00000403994 DKC1O60832 514 aaKnown RBP eCLIP17.21■□□□□ 0.35
TPM1-207ENST00000403994 SFPQP23246 707 aaKnown RBP eCLIP17.21■□□□□ 0.35
TPM1-207ENST00000403994 CDC42EP1Q00587 391 aa17.21■□□□□ 0.35
TPM1-207ENST00000403994 CYP4A11Q02928 519 aa17.21■□□□□ 0.35
TPM1-207ENST00000403994 EPHA7Q15375 998 aa17.21■□□□□ 0.35
TPM1-207ENST00000403994 PUS10Q3MIT2 529 aaKnown RBP17.21■□□□□ 0.35
TPM1-207ENST00000403994 CLLU1OSQ5K130 101 aa17.21■□□□□ 0.35
TPM1-207ENST00000403994 ADGRD2Q7Z7M1 963 aa17.21■□□□□ 0.35
TPM1-207ENST00000403994 ZNF598Q86UK7 904 aaKnown RBP17.21■□□□□ 0.35
TPM1-207ENST00000403994 LRRC43Q8N309 656 aa17.21■□□□□ 0.35
TPM1-207ENST00000403994 ZNF579Q8NAF0 562 aaKnown RBP17.21■□□□□ 0.35
TPM1-207ENST00000403994 SLC7A3Q8WY07 619 aa17.21■□□□□ 0.35
TPM1-207ENST00000403994 CASD1Q96PB1 797 aa17.21■□□□□ 0.35
TPM1-207ENST00000403994 JPH2Q9BR39 696 aaPredicted RBP17.21■□□□□ 0.35
TPM1-207ENST00000403994 FDXACB1Q9BRP7 624 aaPredicted RBP17.21■□□□□ 0.35
TPM1-207ENST00000403994 AAASQ9NRG9 546 aa17.21■□□□□ 0.35
TPM1-207ENST00000403994 PPME1Q9Y570 386 aa17.21■□□□□ 0.35
TPM1-207ENST00000403994 PCDHB12Q9Y5F1 795 aa17.21■□□□□ 0.35
TPM1-207ENST00000403994 PCDHGC5Q9Y5F6 944 aa17.21■□□□□ 0.35
TPM1-207ENST00000403994 A0A0U1RQF3 1178 aa17.2■□□□□ 0.34
TPM1-207ENST00000403994 LINC01565O15544 149 aa17.2■□□□□ 0.34
TPM1-207ENST00000403994 MARCH6O60337 910 aa17.2■□□□□ 0.34
TPM1-207ENST00000403994 NEMFO60524 1076 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms