RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 GOLPH3Q9H4A6 298 aa21.58■■□□□ 1.05
CCDC47-202ENST00000403162 ADARB2Q9NS39 739 aaKnown RBP21.58■■□□□ 1.05
CCDC47-202ENST00000403162 CALUO43852 315 aaPredicted RBP21.58■■□□□ 1.04
CCDC47-202ENST00000403162 XRCC5P13010 732 aaKnown RBP21.58■■□□□ 1.04
CCDC47-202ENST00000403162 SEC24CP53992 1094 aa21.58■■□□□ 1.04
CCDC47-202ENST00000403162 HIRAP54198 1017 aaPredicted RBP21.58■■□□□ 1.04
CCDC47-202ENST00000403162 NPEPPSP55786 919 aa21.58■■□□□ 1.04
CCDC47-202ENST00000403162 ZNF844Q08AG5 666 aa21.58■■□□□ 1.04
CCDC47-202ENST00000403162 ANGEL2Q5VTE6 544 aaKnown RBP21.58■■□□□ 1.04
CCDC47-202ENST00000403162 VPS36Q86VN1 386 aa21.58■■□□□ 1.04
CCDC47-202ENST00000403162 ZHX3Q9H4I2 956 aa21.58■■□□□ 1.04
CCDC47-202ENST00000403162 SLC12A6Q9UHW9 1150 aa21.58■■□□□ 1.04
CCDC47-202ENST00000403162 POTEFA5A3E0 1075 aa21.57■■□□□ 1.04
CCDC47-202ENST00000403162 POTEIP0CG38 1075 aa21.57■■□□□ 1.04
CCDC47-202ENST00000403162 SHMT1P34896 483 aa21.57■■□□□ 1.04
CCDC47-202ENST00000403162 CTNNA1P35221 906 aaKnown RBP21.57■■□□□ 1.04
CCDC47-202ENST00000403162 HOXD13P35453 343 aa21.57■■□□□ 1.04
CCDC47-202ENST00000403162 SLC16A2P36021 539 aa21.57■■□□□ 1.04
CCDC47-202ENST00000403162 SPIRE1Q08AE8 756 aa21.57■■□□□ 1.04
CCDC47-202ENST00000403162 AGBL2Q5U5Z8 902 aa21.57■■□□□ 1.04
CCDC47-202ENST00000403162 POTEGQ6S5H5 508 aa21.57■■□□□ 1.04
CCDC47-202ENST00000403162 POTEEQ6S8J3 1075 aa21.57■■□□□ 1.04
CCDC47-202ENST00000403162 PEX26Q7Z412 305 aa21.57■■□□□ 1.04
CCDC47-202ENST00000403162 SYCE1Q8N0S2 351 aa21.57■■□□□ 1.04
CCDC47-202ENST00000403162 SEC14L1Q92503 715 aa21.57■■□□□ 1.04
CCDC47-202ENST00000403162 L3MBTL3Q96JM7 780 aaPredicted RBP21.57■■□□□ 1.04
CCDC47-202ENST00000403162 AP1M1Q9BXS5 423 aa21.57■■□□□ 1.04
CCDC47-202ENST00000403162 NEUROG2Q9H2A3 272 aa21.57■■□□□ 1.04
CCDC47-202ENST00000403162 DNAJC18Q9H819 358 aa21.57■■□□□ 1.04
CCDC47-202ENST00000403162 METTL14Q9HCE5 456 aaKnown RBP21.57■■□□□ 1.04
CCDC47-202ENST00000403162 SIX2Q9NPC8 291 aa21.57■■□□□ 1.04
CCDC47-202ENST00000403162 E7EVH7 732 aa21.57■■□□□ 1.04
CCDC47-202ENST00000403162 KRIT1O00522 736 aa21.57■■□□□ 1.04
CCDC47-202ENST00000403162 SLC16A3O15427 465 aaKnown RBP21.57■■□□□ 1.04
CCDC47-202ENST00000403162 H2AFZP0C0S5 128 aa21.57■■□□□ 1.04
CCDC47-202ENST00000403162 STAT3P40763 770 aa21.57■■□□□ 1.04
CCDC47-202ENST00000403162 BMT2Q1RMZ1 405 aa21.57■■□□□ 1.04
CCDC47-202ENST00000403162 H2AFVQ71UI9 128 aa21.57■■□□□ 1.04
CCDC47-202ENST00000403162 CDAN1Q8IWY9 1227 aa21.57■■□□□ 1.04
CCDC47-202ENST00000403162 SYT2Q8N9I0 419 aaPredicted RBP21.57■■□□□ 1.04
CCDC47-202ENST00000403162 ANO3Q9BYT9 981 aa21.57■■□□□ 1.04
CCDC47-202ENST00000403162 SIPA1L1O43166 1804 aa21.56■■□□□ 1.04
CCDC47-202ENST00000403162 DCAF8L1A6NGE4 600 aa21.56■■□□□ 1.04
CCDC47-202ENST00000403162 USP17L15C9J2P7 530 aa21.56■■□□□ 1.04
CCDC47-202ENST00000403162 USP17L13C9JLJ4 530 aa21.56■■□□□ 1.04
CCDC47-202ENST00000403162 USP17L11C9JVI0 530 aa21.56■■□□□ 1.04
CCDC47-202ENST00000403162 USP17L18D6R9N7 530 aa21.56■■□□□ 1.04
CCDC47-202ENST00000403162 USP17L22D6RA61 530 aa21.56■■□□□ 1.04
CCDC47-202ENST00000403162 USP17L17D6RBQ6 530 aa21.56■■□□□ 1.04
CCDC47-202ENST00000403162 USP17L19D6RCP7 530 aa21.56■■□□□ 1.04
CCDC47-202ENST00000403162 USP17L20D6RJB6 530 aa21.56■■□□□ 1.04
CCDC47-202ENST00000403162 HPDP32754 393 aaPredicted RBP21.56■■□□□ 1.04
CCDC47-202ENST00000403162 USP17L24Q0WX57 530 aa21.56■■□□□ 1.04
CCDC47-202ENST00000403162 USP17L6PQ6QN14 398 aa21.56■■□□□ 1.04
CCDC47-202ENST00000403162 C6orf89Q6UWU4 347 aa21.56■■□□□ 1.04
CCDC47-202ENST00000403162 SFR1Q86XK3 245 aa21.56■■□□□ 1.04
CCDC47-202ENST00000403162 DDX42Q86XP3 938 aaKnown RBP eCLIP21.56■■□□□ 1.04
CCDC47-202ENST00000403162 CATSPER3Q86XQ3 398 aa21.56■■□□□ 1.04
CCDC47-202ENST00000403162 DDX47Q9H0S4 455 aaKnown RBP21.56■■□□□ 1.04
CCDC47-202ENST00000403162 GGA3Q9NZ52 723 aa21.56■■□□□ 1.04
CCDC47-202ENST00000403162 MYO1FO00160 1098 aa21.55■■□□□ 1.04
CCDC47-202ENST00000403162 AKAP3O75969 853 aa21.55■■□□□ 1.04
CCDC47-202ENST00000403162 DRP2Q13474 957 aa21.55■■□□□ 1.04
CCDC47-202ENST00000403162 PLCB4Q15147 1175 aa21.55■■□□□ 1.04
CCDC47-202ENST00000403162 KCTD1Q719H9 257 aa21.55■■□□□ 1.04
CCDC47-202ENST00000403162 CCDC26Q8TAB7 109 aa21.55■■□□□ 1.04
CCDC47-202ENST00000403162 ERMNQ8TAM6 284 aa21.55■■□□□ 1.04
CCDC47-202ENST00000403162 ETNPPLQ8TBG4 499 aa21.55■■□□□ 1.04
CCDC47-202ENST00000403162 CABS1Q96KC9 395 aa21.55■■□□□ 1.04
CCDC47-202ENST00000403162 REEP2Q9BRK0 252 aa21.55■■□□□ 1.04
CCDC47-202ENST00000403162 TYW1Q9NV66 732 aaKnown RBP21.55■■□□□ 1.04
CCDC47-202ENST00000403162 GTPBP10A4D1E9 387 aaKnown RBP21.55■■□□□ 1.04
CCDC47-202ENST00000403162 TMCO5BA8MYB1 307 aa21.55■■□□□ 1.04
CCDC47-202ENST00000403162 GFPT2O94808 682 aa21.55■■□□□ 1.04
CCDC47-202ENST00000403162 NT5DC3Q86UY8 548 aa21.55■■□□□ 1.04
CCDC47-202ENST00000403162 CRYGNQ8WXF5 182 aa21.55■■□□□ 1.04
CCDC47-202ENST00000403162 HES6Q96HZ4 224 aa21.55■■□□□ 1.04
CCDC47-202ENST00000403162 DEFB129Q9H1M3 183 aa21.55■■□□□ 1.04
CCDC47-202ENST00000403162 TTC7AQ9ULT0 858 aaPredicted RBP21.55■■□□□ 1.04
CCDC47-202ENST00000403162 DNM3Q9UQ16 869 aa21.55■■□□□ 1.04
CCDC47-202ENST00000403162 TBX3O15119 743 aa21.54■■□□□ 1.04
CCDC47-202ENST00000403162 RPA1P27694 616 aa21.54■■□□□ 1.04
CCDC47-202ENST00000403162 AP3B2Q13367 1082 aa21.54■■□□□ 1.04
CCDC47-202ENST00000403162 APOBEC3FQ8IUX4 373 aaKnown RBP21.54■■□□□ 1.04
CCDC47-202ENST00000403162 OR2W6PQ8NHA6 318 aa21.54■■□□□ 1.04
CCDC47-202ENST00000403162 CYFIP2Q96F07 1278 aa21.54■■□□□ 1.04
CCDC47-202ENST00000403162 UIMC1Q96RL1 719 aa21.54■■□□□ 1.04
CCDC47-202ENST00000403162 CENPHQ9H3R5 247 aa21.54■■□□□ 1.04
CCDC47-202ENST00000403162 VCPKMTQ9H867 229 aa21.54■■□□□ 1.04
CCDC47-202ENST00000403162 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.54■■□□□ 1.04
CCDC47-202ENST00000403162 GMNCA6NCL1 334 aa21.54■■□□□ 1.04
CCDC47-202ENST00000403162 H0YHG0 523 aa21.54■■□□□ 1.04
CCDC47-202ENST00000403162 DDX3XO00571 662 aaKnown RBP eCLIP21.54■■□□□ 1.041e-27■■■□□ 18.3
CCDC47-202ENST00000403162 FERP16591 822 aa21.54■■□□□ 1.04
CCDC47-202ENST00000403162 RPL13P26373 211 aaKnown RBP21.54■■□□□ 1.04
CCDC47-202ENST00000403162 QRICH1Q2TAL8 776 aa21.54■■□□□ 1.04
CCDC47-202ENST00000403162 DCAF17Q5H9S7 520 aaPredicted RBP21.54■■□□□ 1.04
CCDC47-202ENST00000403162 TMC3Q7Z5M5 1100 aa21.54■■□□□ 1.04
CCDC47-202ENST00000403162 SLC35C1Q96A29 364 aa21.54■■□□□ 1.04
CCDC47-202ENST00000403162 HERC5Q9UII4 1024 aaKnown RBP21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms