RNA–Protein interactions for RNA: ENST00000400018.7

SKA3-203, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SKA3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-203ENST00000400018 NPTX2P47972 431 aa12.9□□□□□ -0.34
SKA3-203ENST00000400018 ZNF75DP51815 510 aa12.9□□□□□ -0.34
SKA3-203ENST00000400018 LRMPQ12912 555 aa12.9□□□□□ -0.34
SKA3-203ENST00000400018 SCARA3Q6AZY7 606 aa12.9□□□□□ -0.34
SKA3-203ENST00000400018 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.9□□□□□ -0.34
SKA3-203ENST00000400018 RHPN2Q8IUC4 686 aa12.9□□□□□ -0.34
SKA3-203ENST00000400018 RAET1EQ8TD07 263 aa12.9□□□□□ -0.34
SKA3-203ENST00000400018 ANP32BQ92688 251 aaKnown RBP12.9□□□□□ -0.34
SKA3-203ENST00000400018 CEP89Q96ST8 783 aa12.9□□□□□ -0.34
SKA3-203ENST00000400018 RMND1Q9NWS8 449 aa12.9□□□□□ -0.34
SKA3-203ENST00000400018 UQCRHLA0A096LP55 91 aa12.9□□□□□ -0.35
SKA3-203ENST00000400018 ANKRD63C9JTQ0 380 aa12.9□□□□□ -0.35
SKA3-203ENST00000400018 UQCRHP07919 91 aa12.9□□□□□ -0.35
SKA3-203ENST00000400018 XKR3Q5GH77 459 aa12.9□□□□□ -0.35
SKA3-203ENST00000400018 GNASQ5JWF2 1037 aa12.9□□□□□ -0.35
SKA3-203ENST00000400018 ELOA2Q8IYF1 753 aaPredicted RBP12.9□□□□□ -0.35
SKA3-203ENST00000400018 PRPF31Q8WWY3 499 aaKnown RBP12.9□□□□□ -0.35
SKA3-203ENST00000400018 SAAL1Q96ER3 474 aa12.9□□□□□ -0.35
SKA3-203ENST00000400018 MPHOSPH6Q99547 160 aaKnown RBP12.9□□□□□ -0.35
SKA3-203ENST00000400018 OSBPL7Q9BZF2 842 aa12.9□□□□□ -0.35
SKA3-203ENST00000400018 PCDHB13Q9Y5F0 798 aa12.9□□□□□ -0.35
SKA3-203ENST00000400018 ZMYM2Q9UBW7 1377 aa12.89□□□□□ -0.35
SKA3-203ENST00000400018 PVALEFA0A1B0GWK0 134 aa12.89□□□□□ -0.35
SKA3-203ENST00000400018 PSMA7O14818 248 aa12.89□□□□□ -0.35
SKA3-203ENST00000400018 TGFB1I1O43294 461 aa12.89□□□□□ -0.35
SKA3-203ENST00000400018 UBASH3AP57075 661 aa12.89□□□□□ -0.35
SKA3-203ENST00000400018 MTFR1Q15390 333 aa12.89□□□□□ -0.35
SKA3-203ENST00000400018 KIAA0753Q2KHM9 967 aa12.89□□□□□ -0.35
SKA3-203ENST00000400018 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.89□□□□□ -0.35
SKA3-203ENST00000400018 ZNF720Q7Z2F6 126 aa12.89□□□□□ -0.35
SKA3-203ENST00000400018 TRIML1Q8N9V2 468 aa12.89□□□□□ -0.35
SKA3-203ENST00000400018 KAT2BQ92831 832 aa12.89□□□□□ -0.35
SKA3-203ENST00000400018 CBWD1Q9BRT8 395 aa12.89□□□□□ -0.35
SKA3-203ENST00000400018 CDHR5Q9HBB8 845 aa12.89□□□□□ -0.35
SKA3-203ENST00000400018 EYSQ5T1H1 3165 aa12.89□□□□□ -0.35
SKA3-203ENST00000400018 FRMD3A2A2Y4 597 aa12.89□□□□□ -0.35
SKA3-203ENST00000400018 GLRA2P23416 452 aa12.89□□□□□ -0.35
SKA3-203ENST00000400018 KLRC1P26715 233 aa12.89□□□□□ -0.35
SKA3-203ENST00000400018 KRT31Q15323 416 aa12.89□□□□□ -0.35
SKA3-203ENST00000400018 SPATA1Q5VX52 437 aa12.89□□□□□ -0.35
SKA3-203ENST00000400018 TAS1R3Q7RTX0 852 aa12.89□□□□□ -0.35
SKA3-203ENST00000400018 ENOX1Q8TC92 643 aaKnown RBP12.89□□□□□ -0.35
SKA3-203ENST00000400018 CRACR2AQ9BSW2 395 aa12.89□□□□□ -0.35
SKA3-203ENST00000400018 KCTD10Q9H3F6 313 aa12.89□□□□□ -0.35
SKA3-203ENST00000400018 MINDY3Q9H8M7 445 aa12.89□□□□□ -0.35
SKA3-203ENST00000400018 COL4A3BPQ9Y5P4 624 aa12.89□□□□□ -0.35
SKA3-203ENST00000400018 B4DLN1 442 aa12.88□□□□□ -0.35
SKA3-203ENST00000400018 KCNJ18B7U540 433 aa12.88□□□□□ -0.35
SKA3-203ENST00000400018 HOXC6P09630 235 aa12.88□□□□□ -0.35
SKA3-203ENST00000400018 IQCF3P0C7M6 154 aa12.88□□□□□ -0.35
SKA3-203ENST00000400018 ZNF18P17022 549 aa12.88□□□□□ -0.35
SKA3-203ENST00000400018 KCNJ12Q14500 433 aa12.88□□□□□ -0.35
SKA3-203ENST00000400018 EFCAB12Q6NXP0 572 aa12.88□□□□□ -0.35
SKA3-203ENST00000400018 APTXQ7Z2E3 356 aaKnown RBP12.88□□□□□ -0.35
SKA3-203ENST00000400018 TMC6Q7Z403 805 aa12.88□□□□□ -0.35
SKA3-203ENST00000400018 HAUS6Q7Z4H7 955 aa12.88□□□□□ -0.35
SKA3-203ENST00000400018 ZSCAN30Q86W11 494 aa12.88□□□□□ -0.35
SKA3-203ENST00000400018 MAGEF1Q9HAY2 307 aa12.88□□□□□ -0.35
SKA3-203ENST00000400018 SRRDQ9UH36 339 aa12.88□□□□□ -0.35
SKA3-203ENST00000400018 RWDD2AQ9UIY3 292 aa12.88□□□□□ -0.35
SKA3-203ENST00000400018 DENND3A2RUS2 1198 aa12.88□□□□□ -0.35
SKA3-203ENST00000400018 RNF225M0QZC1 329 aaPredicted RBP12.88□□□□□ -0.35
SKA3-203ENST00000400018 B4GALT5O43286 388 aa12.88□□□□□ -0.35
SKA3-203ENST00000400018 ALDH1A1P00352 501 aa12.88□□□□□ -0.35
SKA3-203ENST00000400018 PTMAP06454 111 aaKnown RBP12.88□□□□□ -0.35
SKA3-203ENST00000400018 CCNE1P24864 410 aa12.88□□□□□ -0.35
SKA3-203ENST00000400018 LAMC2Q13753 1193 aa12.88□□□□□ -0.35
SKA3-203ENST00000400018 ZBTB41Q5SVQ8 909 aa12.88□□□□□ -0.35
SKA3-203ENST00000400018 LMBRD2Q68DH5 695 aaPredicted RBP12.88□□□□□ -0.35
SKA3-203ENST00000400018 OTUD6AQ7L8S5 288 aa12.88□□□□□ -0.35
SKA3-203ENST00000400018 SYCP3Q8IZU3 236 aa12.88□□□□□ -0.35
SKA3-203ENST00000400018 CNOT6LQ96LI5 555 aaKnown RBP12.88□□□□□ -0.35
SKA3-203ENST00000400018 CYBAP13498 195 aa12.87□□□□□ -0.35
SKA3-203ENST00000400018 MSNP26038 577 aaKnown RBP12.87□□□□□ -0.35
SKA3-203ENST00000400018 C1QTNF8P60827 252 aa12.87□□□□□ -0.35
SKA3-203ENST00000400018 OSTNP61366 133 aa12.87□□□□□ -0.35
SKA3-203ENST00000400018 KIF22Q14807 665 aa12.87□□□□□ -0.35
SKA3-203ENST00000400018 FAM47CQ5HY64 1035 aa12.87□□□□□ -0.35
SKA3-203ENST00000400018 RUFY4Q6ZNE9 571 aa12.87□□□□□ -0.35
SKA3-203ENST00000400018 PPTC7Q8NI37 304 aa12.87□□□□□ -0.35
SKA3-203ENST00000400018 SOCS4Q8WXH5 440 aa12.87□□□□□ -0.35
SKA3-203ENST00000400018 CCDC47Q96A33 483 aaKnown RBP12.87□□□□□ -0.35
SKA3-203ENST00000400018 ZCCHC17Q9NP64 241 aaKnown RBP12.87□□□□□ -0.35
SKA3-203ENST00000400018 SLC5A4Q9NY91 659 aa12.87□□□□□ -0.35
SKA3-203ENST00000400018 DBR1Q9UK59 544 aaKnown RBP12.87□□□□□ -0.35
SKA3-203ENST00000400018 TREHO43280 583 aa12.87□□□□□ -0.35
SKA3-203ENST00000400018 NR2F2P24468 414 aa12.87□□□□□ -0.35
SKA3-203ENST00000400018 MAP2K2P36507 400 aa12.87□□□□□ -0.35
SKA3-203ENST00000400018 TERF1P54274 439 aa12.87□□□□□ -0.35
SKA3-203ENST00000400018 CAPSQ13938 189 aa12.87□□□□□ -0.35
SKA3-203ENST00000400018 MARCH8Q5T0T0 291 aa12.87□□□□□ -0.35
SKA3-203ENST00000400018 FAM160B1Q5W0V3 765 aa12.87□□□□□ -0.35
SKA3-203ENST00000400018 CENPPQ6IPU0 288 aa12.87□□□□□ -0.35
SKA3-203ENST00000400018 CCDC186Q7Z3E2 898 aa12.87□□□□□ -0.35
SKA3-203ENST00000400018 ZNF467Q7Z7K2 595 aaPredicted RBP12.87□□□□□ -0.35
SKA3-203ENST00000400018 RNF149Q8NC42 400 aa12.87□□□□□ -0.35
SKA3-203ENST00000400018 SLC7A3Q8WY07 619 aa12.87□□□□□ -0.35
SKA3-203ENST00000400018 POP1Q99575 1024 aaKnown RBP12.87□□□□□ -0.35
SKA3-203ENST00000400018 ATP6V0A4Q9HBG4 840 aa12.87□□□□□ -0.35
SKA3-203ENST00000400018 KMT5AQ9NQR1 393 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms