RNA–Protein interactions for RNA: ENST00000399668.6

KNL1-202, Transcript of kinetochore scaffold 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KNL1, Length 7,607 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-202ENST00000399668 FIS1Q9Y3D6 152 aa3.5□□□□□ -1.85
KNL1-202ENST00000399668 PXDNLA1KZ92 1463 aa3.5□□□□□ -1.85
KNL1-202ENST00000399668 MED7O43513 233 aa3.5□□□□□ -1.85
KNL1-202ENST00000399668 SUN1O94901 812 aa3.5□□□□□ -1.85
KNL1-202ENST00000399668 PSAPP07602 524 aa3.5□□□□□ -1.85
KNL1-202ENST00000399668 SERPINB6P35237 376 aa3.5□□□□□ -1.85
KNL1-202ENST00000399668 VAMP7P51809 220 aa3.5□□□□□ -1.85
KNL1-202ENST00000399668 CLNS1AP54105 237 aaKnown RBP3.5□□□□□ -1.85
KNL1-202ENST00000399668 YWHAGP61981 247 aaKnown RBP eCLIP3.5□□□□□ -1.85
KNL1-202ENST00000399668 LMNB2Q03252 620 aa3.5□□□□□ -1.85
KNL1-202ENST00000399668 EN1Q05925 392 aaPredicted RBP3.5□□□□□ -1.85
KNL1-202ENST00000399668 PRPSAP1Q14558 356 aa3.5□□□□□ -1.85
KNL1-202ENST00000399668 NFIXQ14938 502 aa3.5□□□□□ -1.85
KNL1-202ENST00000399668 CIAPIN1Q6FI81 312 aa3.5□□□□□ -1.85
KNL1-202ENST00000399668 PPP4R3CPQ6ZMV5 832 aa3.5□□□□□ -1.85
KNL1-202ENST00000399668 ARMC9Q7Z3E5 817 aa3.5□□□□□ -1.85
KNL1-202ENST00000399668 GJD4Q96KN9 370 aaPredicted RBP3.5□□□□□ -1.85
KNL1-202ENST00000399668 VCX3BQ9H321 246 aa3.5□□□□□ -1.85
KNL1-202ENST00000399668 ZBTB12Q9Y330 459 aaPredicted RBP3.5□□□□□ -1.85
KNL1-202ENST00000399668 DOCK10Q96BY6 2186 aa3.5□□□□□ -1.85
KNL1-202ENST00000399668 CEP250Q9BV73 2442 aa3.5□□□□□ -1.85
KNL1-202ENST00000399668 TTC26A0AVF1 554 aa3.5□□□□□ -1.85
KNL1-202ENST00000399668 LGALS16A8MUM7 142 aa3.5□□□□□ -1.85
KNL1-202ENST00000399668 OPHN1O60890 802 aa3.5□□□□□ -1.85
KNL1-202ENST00000399668 FTLP02792 175 aaPredicted RBP3.5□□□□□ -1.85
KNL1-202ENST00000399668 TMED2Q15363 201 aa3.5□□□□□ -1.85
KNL1-202ENST00000399668 CCDC144BQ3MJ40 725 aa3.5□□□□□ -1.85
KNL1-202ENST00000399668 KIAA1841Q6NSI8 718 aa3.5□□□□□ -1.85
KNL1-202ENST00000399668 DGKHQ86XP1 1220 aa3.5□□□□□ -1.85
KNL1-202ENST00000399668 RTKN2Q8IZC4 609 aa3.5□□□□□ -1.85
KNL1-202ENST00000399668 PROM2Q8N271 834 aa3.5□□□□□ -1.85
KNL1-202ENST00000399668 PYROXD1Q8WU10 500 aa3.5□□□□□ -1.85
KNL1-202ENST00000399668 NSUN4Q96CB9 384 aaKnown RBP3.5□□□□□ -1.85
KNL1-202ENST00000399668 SAAL1Q96ER3 474 aa3.5□□□□□ -1.85
KNL1-202ENST00000399668 CFAP57Q96MR6 1250 aa3.5□□□□□ -1.85
KNL1-202ENST00000399668 RUNDC3BQ96NL0 473 aa3.5□□□□□ -1.85
KNL1-202ENST00000399668 OSBPL9Q96SU4 736 aa3.5□□□□□ -1.85
KNL1-202ENST00000399668 MSTO1Q9BUK6 570 aa3.5□□□□□ -1.85
KNL1-202ENST00000399668 MLXIPLQ9NP71 852 aa3.5□□□□□ -1.85
KNL1-202ENST00000399668 TRIM10Q9UDY6 481 aa3.5□□□□□ -1.85
KNL1-202ENST00000399668 IQSEC2Q5JU85 1478 aa3.5□□□□□ -1.85
KNL1-202ENST00000399668 DDX60Q8IY21 1712 aaKnown RBP3.5□□□□□ -1.85
KNL1-202ENST00000399668 COL11A1P12107 1806 aaPredicted RBP3.5□□□□□ -1.85
KNL1-202ENST00000399668 FRMD3A2A2Y4 597 aa3.5□□□□□ -1.85
KNL1-202ENST00000399668 KIF28PB7ZC32 967 aa3.5□□□□□ -1.85
KNL1-202ENST00000399668 NOL3O60936 208 aaKnown RBP3.5□□□□□ -1.85
KNL1-202ENST00000399668 TJP3O95049 919 aa3.5□□□□□ -1.85
KNL1-202ENST00000399668 FGGP02679 453 aa3.5□□□□□ -1.85
KNL1-202ENST00000399668 NR3C1P04150 777 aa3.5□□□□□ -1.85
KNL1-202ENST00000399668 PSMA2P25787 234 aa3.5□□□□□ -1.85
KNL1-202ENST00000399668 ATP2C1P98194 919 aaPredicted RBP3.5□□□□□ -1.85
KNL1-202ENST00000399668 MYO1EQ12965 1108 aa3.5□□□□□ -1.85
KNL1-202ENST00000399668 MAPK6Q16659 721 aa3.5□□□□□ -1.85
KNL1-202ENST00000399668 FAM133BQ5BKY9 247 aaKnown RBP3.5□□□□□ -1.85
KNL1-202ENST00000399668 SWSAP1Q6NVH7 229 aa3.5□□□□□ -1.85
KNL1-202ENST00000399668 NFRKBQ6P4R8 1299 aa3.5□□□□□ -1.85
KNL1-202ENST00000399668 FOXP4Q8IVH2 680 aaPredicted RBP3.5□□□□□ -1.85
KNL1-202ENST00000399668 RPUSD2Q8IZ73 545 aaKnown RBP3.5□□□□□ -1.85
KNL1-202ENST00000399668 RYBPQ8N488 228 aaPredicted RBP3.5□□□□□ -1.85
KNL1-202ENST00000399668 SLC17A8Q8NDX2 589 aa3.5□□□□□ -1.85
KNL1-202ENST00000399668 LXNQ9BS40 222 aa3.5□□□□□ -1.85
KNL1-202ENST00000399668 SPZ1Q9BXG8 430 aa3.5□□□□□ -1.85
KNL1-202ENST00000399668 IRX2Q9BZI1 471 aaPredicted RBP3.5□□□□□ -1.85
KNL1-202ENST00000399668 INPP5FQ9Y2H2 1132 aa3.5□□□□□ -1.85
KNL1-202ENST00000399668 OVOS2A0A0J9YW53 1432 aa3.5□□□□□ -1.85
KNL1-202ENST00000399668 OVOS2Q6IE36 1432 aa3.5□□□□□ -1.85
KNL1-202ENST00000399668 LMO7Q8WWI1 1683 aa3.5□□□□□ -1.85
KNL1-202ENST00000399668 OVOS2A0A0G2JMS6 1433 aa3.5□□□□□ -1.85
KNL1-202ENST00000399668 EXOC1LA0A1B0GW35 172 aa3.5□□□□□ -1.85
KNL1-202ENST00000399668 DENND3A2RUS2 1198 aa3.5□□□□□ -1.85
KNL1-202ENST00000399668 SLC16A4O15374 487 aa3.5□□□□□ -1.85
KNL1-202ENST00000399668 ADGRB2O60241 1585 aa3.5□□□□□ -1.85
KNL1-202ENST00000399668 CPP00450 1065 aa3.5□□□□□ -1.85
KNL1-202ENST00000399668 IREB2P48200 963 aaKnown RBP3.5□□□□□ -1.85
KNL1-202ENST00000399668 EPHB4P54760 987 aa3.5□□□□□ -1.85
KNL1-202ENST00000399668 EXOSC10Q01780 885 aaKnown RBP3.5□□□□□ -1.85
KNL1-202ENST00000399668 DHX9Q08211 1270 aaKnown RBP3.5□□□□□ -1.85
KNL1-202ENST00000399668 TSTA3Q13630 321 aaPredicted RBP3.5□□□□□ -1.85
KNL1-202ENST00000399668 KIAA2026Q5HYC2 2103 aa3.5□□□□□ -1.85
KNL1-202ENST00000399668 RWDD4Q6NW29 188 aaKnown RBP3.5□□□□□ -1.85
KNL1-202ENST00000399668 N4BP2Q86UW6 1770 aaPredicted RBP3.5□□□□□ -1.85
KNL1-202ENST00000399668 HEMGNQ9BXL5 484 aa3.5□□□□□ -1.85
KNL1-202ENST00000399668 ZMYND12Q9H0C1 365 aa3.5□□□□□ -1.85
KNL1-202ENST00000399668 SENP2Q9HC62 589 aa3.5□□□□□ -1.85
KNL1-202ENST00000399668 AGPAT5Q9NUQ2 364 aa3.5□□□□□ -1.85
KNL1-202ENST00000399668 PIM2Q9P1W9 311 aa3.5□□□□□ -1.85
KNL1-202ENST00000399668 ZRANB2O95218 330 aaKnown RBP eCLIP3.49□□□□□ -1.85
KNL1-202ENST00000399668 PDHBP11177 359 aa3.49□□□□□ -1.85
KNL1-202ENST00000399668 ACTN1P12814 892 aa3.49□□□□□ -1.85
KNL1-202ENST00000399668 USP14P54578 494 aa3.49□□□□□ -1.85
KNL1-202ENST00000399668 DR1Q01658 176 aa3.49□□□□□ -1.85
KNL1-202ENST00000399668 SMAD1Q15797 465 aaKnown RBP3.49□□□□□ -1.85
KNL1-202ENST00000399668 ZNF568Q3ZCX4 644 aa3.49□□□□□ -1.85
KNL1-202ENST00000399668 PPP6R3Q5H9R7 873 aaPredicted RBP3.49□□□□□ -1.85
KNL1-202ENST00000399668 ANKRD40Q6AI12 368 aa3.49□□□□□ -1.85
KNL1-202ENST00000399668 TMEM270Q6UE05 265 aa3.49□□□□□ -1.85
KNL1-202ENST00000399668 USP49Q70CQ1 688 aa3.49□□□□□ -1.85
KNL1-202ENST00000399668 FAM160B2Q86V87 743 aa3.49□□□□□ -1.85
KNL1-202ENST00000399668 MB21D2Q8IYB1 491 aaPredicted RBP3.49□□□□□ -1.85
KNL1-202ENST00000399668 LRRC43Q8N309 656 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms