RNA–Protein interactions for RNA: ENST00000399438.7

TRAPPC13-202, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TRAPPC13, Length 3,221 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-202ENST00000399438 MAP3K11Q16584 847 aa6.85□□□□□ -1.31
TRAPPC13-202ENST00000399438 ATP2B3Q16720 1220 aa6.85□□□□□ -1.31
TRAPPC13-202ENST00000399438 POTEAQ6S8J7 498 aa6.85□□□□□ -1.31
TRAPPC13-202ENST00000399438 TMTC1Q8IUR5 882 aa6.85□□□□□ -1.31
TRAPPC13-202ENST00000399438 EPHX4Q8IUS5 362 aa6.85□□□□□ -1.31
TRAPPC13-202ENST00000399438 TMEM151BQ8IW70 566 aa6.85□□□□□ -1.31
TRAPPC13-202ENST00000399438 ETFBKMTQ8IXQ9 262 aa6.85□□□□□ -1.31
TRAPPC13-202ENST00000399438 PPM1KQ8N3J5 372 aa6.85□□□□□ -1.31
TRAPPC13-202ENST00000399438 DEPTORQ8TB45 409 aa6.85□□□□□ -1.31
TRAPPC13-202ENST00000399438 MAML1Q92585 1016 aa6.85□□□□□ -1.31
TRAPPC13-202ENST00000399438 NKD1Q969G9 470 aa6.85□□□□□ -1.31
TRAPPC13-202ENST00000399438 MPHOSPH8Q99549 860 aa6.85□□□□□ -1.31
TRAPPC13-202ENST00000399438 TRIM5Q9C035 493 aa6.85□□□□□ -1.31
TRAPPC13-202ENST00000399438 CPSF2Q9P2I0 782 aaKnown RBP6.85□□□□□ -1.31
TRAPPC13-202ENST00000399438 TLR6Q9Y2C9 796 aa6.85□□□□□ -1.31
TRAPPC13-202ENST00000399438 PALLDQ8WX93 1383 aa6.85□□□□□ -1.31
TRAPPC13-202ENST00000399438 HIP1O00291 1037 aa6.85□□□□□ -1.31
TRAPPC13-202ENST00000399438 HOXC11O43248 304 aaPredicted RBP6.85□□□□□ -1.31
TRAPPC13-202ENST00000399438 GPAA1O43292 621 aa6.85□□□□□ -1.31
TRAPPC13-202ENST00000399438 KLHL41O60662 606 aa6.85□□□□□ -1.31
TRAPPC13-202ENST00000399438 MAFKO60675 156 aa6.85□□□□□ -1.31
TRAPPC13-202ENST00000399438 MMEP08473 750 aa6.85□□□□□ -1.31
TRAPPC13-202ENST00000399438 ARAFP10398 606 aa6.85□□□□□ -1.31
TRAPPC13-202ENST00000399438 P4HA1P13674 534 aa6.85□□□□□ -1.31
TRAPPC13-202ENST00000399438 IL15P40933 162 aaPredicted RBP6.85□□□□□ -1.31
TRAPPC13-202ENST00000399438 DCAF7P61962 342 aa6.85□□□□□ -1.31
TRAPPC13-202ENST00000399438 GRB10Q13322 594 aa6.85□□□□□ -1.31
TRAPPC13-202ENST00000399438 SCARB2Q14108 478 aa6.85□□□□□ -1.31
TRAPPC13-202ENST00000399438 CFAP58Q5T655 872 aa6.85□□□□□ -1.31
TRAPPC13-202ENST00000399438 NCAPGQ9BPX3 1015 aa6.85□□□□□ -1.31
TRAPPC13-202ENST00000399438 SLC7A5P2Q9GIP4 190 aa6.85□□□□□ -1.31
TRAPPC13-202ENST00000399438 KIAA1683Q9H0B3 1180 aa6.85□□□□□ -1.31
TRAPPC13-202ENST00000399438 KCNF1Q9H3M0 494 aa6.85□□□□□ -1.31
TRAPPC13-202ENST00000399438 CBX8Q9HC52 389 aa6.85□□□□□ -1.31
TRAPPC13-202ENST00000399438 EIF2B4Q9UI10 523 aaKnown RBP6.85□□□□□ -1.31
TRAPPC13-202ENST00000399438 ATP6V1DQ9Y5K8 247 aa6.85□□□□□ -1.31
TRAPPC13-202ENST00000399438 BAZ2BQ9UIF8 2168 aaKnown RBP6.84□□□□□ -1.31
TRAPPC13-202ENST00000399438 MAFO75444 373 aaPredicted RBP6.84□□□□□ -1.31
TRAPPC13-202ENST00000399438 PRDM1O75626 825 aa6.84□□□□□ -1.31
TRAPPC13-202ENST00000399438 OFD1O75665 1012 aa6.84□□□□□ -1.31
TRAPPC13-202ENST00000399438 PRKD3O94806 890 aa6.84□□□□□ -1.31
TRAPPC13-202ENST00000399438 SLC3A2P08195 630 aaKnown RBP6.84□□□□□ -1.31
TRAPPC13-202ENST00000399438 POU3F2P20265 443 aaPredicted RBP6.84□□□□□ -1.31
TRAPPC13-202ENST00000399438 RXRBP28702 533 aa6.84□□□□□ -1.31
TRAPPC13-202ENST00000399438 TNNT3P45378 269 aaPredicted RBP6.84□□□□□ -1.31
TRAPPC13-202ENST00000399438 NPTX2P47972 431 aa6.84□□□□□ -1.31
TRAPPC13-202ENST00000399438 SLC7A5Q01650 507 aa6.84□□□□□ -1.31
TRAPPC13-202ENST00000399438 CACNB1Q02641 598 aaPredicted RBP6.84□□□□□ -1.31
TRAPPC13-202ENST00000399438 SEMA3AQ14563 771 aa6.84□□□□□ -1.31
TRAPPC13-202ENST00000399438 BTNL9Q6UXG8 535 aa6.84□□□□□ -1.31
TRAPPC13-202ENST00000399438 FAM47EQ6ZV65 393 aa6.84□□□□□ -1.31
TRAPPC13-202ENST00000399438 BEND5Q7L4P6 421 aa6.84□□□□□ -1.31
TRAPPC13-202ENST00000399438 DHX32Q7L7V1 743 aaKnown RBP6.84□□□□□ -1.31
TRAPPC13-202ENST00000399438 CCDC186Q7Z3E2 898 aa6.84□□□□□ -1.31
TRAPPC13-202ENST00000399438 ANKRD18AQ8IVF6 992 aa6.84□□□□□ -1.31
TRAPPC13-202ENST00000399438 CCDC191Q8NCU4 936 aa6.84□□□□□ -1.31
TRAPPC13-202ENST00000399438 TAAR9Q96RI9 348 aa6.84□□□□□ -1.31
TRAPPC13-202ENST00000399438 TM6SF1Q9BZW5 370 aa6.84□□□□□ -1.31
TRAPPC13-202ENST00000399438 TSPAN10Q9H1Z9 355 aaPredicted RBP6.84□□□□□ -1.31
TRAPPC13-202ENST00000399438 CCDC39Q9UFE4 941 aa6.84□□□□□ -1.31
TRAPPC13-202ENST00000399438 MTF2Q9Y483 593 aaPredicted RBP6.84□□□□□ -1.31
TRAPPC13-202ENST00000399438 CLIC4Q9Y696 253 aa6.84□□□□□ -1.31
TRAPPC13-202ENST00000399438 CYP2D7A0A087X1C5 515 aa6.84□□□□□ -1.31
TRAPPC13-202ENST00000399438 LINC00854A0A1B0GVQ3 168 aa6.84□□□□□ -1.31
TRAPPC13-202ENST00000399438 UPK3BL1B0FP48 263 aa6.84□□□□□ -1.31
TRAPPC13-202ENST00000399438 UPK3BL2E5RIL1 263 aa6.84□□□□□ -1.31
TRAPPC13-202ENST00000399438 CTNND1O60716 968 aaKnown RBP6.84□□□□□ -1.31
TRAPPC13-202ENST00000399438 DNAJC8O75937 253 aaPredicted RBP6.84□□□□□ -1.31
TRAPPC13-202ENST00000399438 HSPA4LO95757 839 aa6.84□□□□□ -1.31
TRAPPC13-202ENST00000399438 ALAS1P13196 640 aa6.84□□□□□ -1.31
TRAPPC13-202ENST00000399438 PDIA3P30101 505 aaKnown RBP6.84□□□□□ -1.31
TRAPPC13-202ENST00000399438 ATXN1P54253 815 aaKnown RBP6.84□□□□□ -1.31
TRAPPC13-202ENST00000399438 EPHA4P54764 986 aa6.84□□□□□ -1.31
TRAPPC13-202ENST00000399438 SLC12A2P55011 1212 aa6.84□□□□□ -1.31
TRAPPC13-202ENST00000399438 GOLGA8FQ08AF8 430 aa6.84□□□□□ -1.31
TRAPPC13-202ENST00000399438 GOLGA8DPQ0D2H9 430 aa6.84□□□□□ -1.31
TRAPPC13-202ENST00000399438 RESTQ13127 1097 aa6.84□□□□□ -1.31
TRAPPC13-202ENST00000399438 PCBP2Q15366 365 aaKnown RBP eCLIP6.84□□□□□ -1.31
TRAPPC13-202ENST00000399438 ZMYM1Q5SVZ6 1142 aa6.84□□□□□ -1.31
TRAPPC13-202ENST00000399438 KAZNQ674X7 775 aa6.84□□□□□ -1.31
TRAPPC13-202ENST00000399438 CRTC1Q6UUV9 634 aa6.84□□□□□ -1.31
TRAPPC13-202ENST00000399438 PDZD4Q76G19 769 aaPredicted RBP6.84□□□□□ -1.31
TRAPPC13-202ENST00000399438 TBC1D10CQ8IV04 446 aa6.84□□□□□ -1.31
TRAPPC13-202ENST00000399438 FSIP1Q8NA03 581 aa6.84□□□□□ -1.31
TRAPPC13-202ENST00000399438 ZNF540Q8NDQ6 660 aa6.84□□□□□ -1.31
TRAPPC13-202ENST00000399438 C16orf45Q96MC5 204 aaPredicted RBP6.84□□□□□ -1.31
TRAPPC13-202ENST00000399438 BAG1Q99933 345 aaPredicted RBP6.84□□□□□ -1.31
TRAPPC13-202ENST00000399438 ARMT1Q9H993 441 aa6.84□□□□□ -1.31
TRAPPC13-202ENST00000399438 SBF2Q86WG5 1849 aa6.84□□□□□ -1.31
TRAPPC13-202ENST00000399438 TMEM229AB2RXF0 380 aa6.84□□□□□ -1.32
TRAPPC13-202ENST00000399438 KIF28PB7ZC32 967 aa6.84□□□□□ -1.32
TRAPPC13-202ENST00000399438 SNUPNO95149 360 aaKnown RBP6.84□□□□□ -1.32
TRAPPC13-202ENST00000399438 CCDC192P0DO97 292 aa6.84□□□□□ -1.32
TRAPPC13-202ENST00000399438 KRT13P13646 458 aa6.84□□□□□ -1.32
TRAPPC13-202ENST00000399438 FDPSP14324 419 aaKnown RBP6.84□□□□□ -1.32
TRAPPC13-202ENST00000399438 RASA2Q15283 850 aa6.84□□□□□ -1.32
TRAPPC13-202ENST00000399438 ZNF362Q5T0B9 420 aaPredicted RBP6.84□□□□□ -1.32
TRAPPC13-202ENST00000399438 RETREG3Q86VR2 466 aa6.84□□□□□ -1.32
TRAPPC13-202ENST00000399438 TNS4Q8IZW8 715 aa6.84□□□□□ -1.32
TRAPPC13-202ENST00000399438 PDCD7Q8N8D1 485 aaKnown RBP6.84□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms