RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 ITIH4Q14624 930 aa15.16■□□□□ 0.02
APOB-202ENST00000399256 AADACL2Q6P093 401 aa15.16■□□□□ 0.02
APOB-202ENST00000399256 POTEGQ6S5H5 508 aa15.16■□□□□ 0.02
APOB-202ENST00000399256 POTEEQ6S8J3 1075 aa15.16■□□□□ 0.02
APOB-202ENST00000399256 TRPM8Q7Z2W7 1104 aa15.16■□□□□ 0.02
APOB-202ENST00000399256 FRMD5Q7Z6J6 570 aa15.16■□□□□ 0.02
APOB-202ENST00000399256 GLYCTKQ8IVS8 523 aa15.16■□□□□ 0.02
APOB-202ENST00000399256 RSRC1Q96IZ7 334 aaKnown RBP15.16■□□□□ 0.02
APOB-202ENST00000399256 CCDC189A1A4V9 331 aa15.16■□□□□ 0.02
APOB-202ENST00000399256 RPS6KA4O75676 772 aa15.16■□□□□ 0.02
APOB-202ENST00000399256 NUDT17P0C025 328 aa15.16■□□□□ 0.02
APOB-202ENST00000399256 CASP4P49662 377 aa15.16■□□□□ 0.02
APOB-202ENST00000399256 CCDC38Q502W7 563 aa15.16■□□□□ 0.02
APOB-202ENST00000399256 PPP4R3CPQ6ZMV5 832 aa15.16■□□□□ 0.02
APOB-202ENST00000399256 EPS8L3Q8TE67 593 aaKnown RBP15.16■□□□□ 0.02
APOB-202ENST00000399256 NAV1Q8NEY1 1877 aa15.16■□□□□ 0.02
APOB-202ENST00000399256 ATAD5Q96QE3 1844 aa15.16■□□□□ 0.02
APOB-202ENST00000399256 SMARCA1P28370 1054 aa15.15■□□□□ 0.02
APOB-202ENST00000399256 JAM2P57087 298 aa15.15■□□□□ 0.02
APOB-202ENST00000399256 ZDHHC24Q6UX98 284 aa15.15■□□□□ 0.02
APOB-202ENST00000399256 JAMLQ86YT9 394 aa15.15■□□□□ 0.02
APOB-202ENST00000399256 GPR101Q96P66 508 aaPredicted RBP15.15■□□□□ 0.02
APOB-202ENST00000399256 CCDC169A6NNP5 214 aa15.15■□□□□ 0.02
APOB-202ENST00000399256 GNPATO15228 680 aa15.15■□□□□ 0.02
APOB-202ENST00000399256 MED24O75448 989 aa15.15■□□□□ 0.02
APOB-202ENST00000399256 GSTA1P08263 222 aa15.15■□□□□ 0.02
APOB-202ENST00000399256 RFC4P35249 363 aa15.15■□□□□ 0.02
APOB-202ENST00000399256 HOXD13P35453 343 aa15.15■□□□□ 0.02
APOB-202ENST00000399256 BTDP43251 543 aa15.15■□□□□ 0.02
APOB-202ENST00000399256 KCNJ2P63252 427 aa15.15■□□□□ 0.02
APOB-202ENST00000399256 SFR1Q86XK3 245 aa15.15■□□□□ 0.02
APOB-202ENST00000399256 PGM2Q96G03 612 aa15.15■□□□□ 0.02
APOB-202ENST00000399256 SEMA4AQ9H3S1 761 aa15.15■□□□□ 0.02
APOB-202ENST00000399256 TMOD4Q9NZQ9 345 aa15.15■□□□□ 0.02
APOB-202ENST00000399256 GOLGA6L10A0A0M3HER8 536 aa15.15■□□□□ 0.02
APOB-202ENST00000399256 MEIS1O00470 390 aa15.15■□□□□ 0.02
APOB-202ENST00000399256 CLGNO14967 610 aa15.15■□□□□ 0.02
APOB-202ENST00000399256 CLIC2O15247 247 aa15.15■□□□□ 0.02
APOB-202ENST00000399256 PPP1R11O60927 126 aaPredicted RBP15.15■□□□□ 0.02
APOB-202ENST00000399256 FGFR4P22455 802 aa15.15■□□□□ 0.02
APOB-202ENST00000399256 KIAA1755Q5JYT7 1200 aa15.15■□□□□ 0.02
APOB-202ENST00000399256 HYIQ5T013 277 aa15.15■□□□□ 0.02
APOB-202ENST00000399256 TBC1D9BQ66K14 1250 aa15.15■□□□□ 0.02
APOB-202ENST00000399256 AMIGO3Q86WK7 504 aa15.15■□□□□ 0.02
APOB-202ENST00000399256 C18orf8Q96DM3 657 aa15.15■□□□□ 0.02
APOB-202ENST00000399256 hCG_1984214I3L0E3 225 aa15.14■□□□□ 0.01
APOB-202ENST00000399256 EVI5O60447 810 aa15.14■□□□□ 0.01
APOB-202ENST00000399256 UBOX5O94941 541 aa15.14■□□□□ 0.01
APOB-202ENST00000399256 ANP32DO95626 131 aa15.14■□□□□ 0.01
APOB-202ENST00000399256 NPEPPSP55786 919 aa15.14■□□□□ 0.01
APOB-202ENST00000399256 KNOP1Q1ED39 458 aaKnown RBP15.14■□□□□ 0.01
APOB-202ENST00000399256 ZNF713Q8N859 430 aaPredicted RBP15.14■□□□□ 0.01
APOB-202ENST00000399256 WDR66Q8TBY9 1149 aa15.14■□□□□ 0.01
APOB-202ENST00000399256 AGAP11Q8TF27 550 aa15.14■□□□□ 0.01
APOB-202ENST00000399256 TRIM6Q9C030 488 aaPredicted RBP15.14■□□□□ 0.01
APOB-202ENST00000399256 BCAS3Q9H6U6 928 aa15.14■□□□□ 0.01
APOB-202ENST00000399256 TRPC6Q9Y210 931 aa15.14■□□□□ 0.01
APOB-202ENST00000399256 RPTORQ8N122 1335 aa15.14■□□□□ 0.01
APOB-202ENST00000399256 KIAA0391O15091 583 aaKnown RBP15.14■□□□□ 0.01
APOB-202ENST00000399256 GSTO1P78417 241 aa15.14■□□□□ 0.01
APOB-202ENST00000399256 SPDYCQ5MJ68 293 aa15.14■□□□□ 0.01
APOB-202ENST00000399256 MGARPQ8TDB4 240 aa15.14■□□□□ 0.01
APOB-202ENST00000399256 ARHGEF26Q96DR7 871 aa15.14■□□□□ 0.01
APOB-202ENST00000399256 DHX36Q9H2U1 1008 aaKnown RBP15.14■□□□□ 0.01
APOB-202ENST00000399256 EBF2Q9HAK2 575 aa15.14■□□□□ 0.01
APOB-202ENST00000399256 SEPT11Q9NVA2 429 aaKnown RBP15.14■□□□□ 0.01
APOB-202ENST00000399256 DBR1Q9UK59 544 aaKnown RBP15.14■□□□□ 0.01
APOB-202ENST00000399256 TTC7AQ9ULT0 858 aaPredicted RBP15.14■□□□□ 0.01
APOB-202ENST00000399256 PCDHB13Q9Y5F0 798 aa15.14■□□□□ 0.01
APOB-202ENST00000399256 RTN2O75298 545 aa15.13■□□□□ 0.01
APOB-202ENST00000399256 SLC12A3P55017 1021 aa15.13■□□□□ 0.01
APOB-202ENST00000399256 PSMC6P62333 389 aa15.13■□□□□ 0.01
APOB-202ENST00000399256 PABPC4Q13310 644 aaKnown RBP eCLIP15.13■□□□□ 0.01
APOB-202ENST00000399256 PLS1Q14651 629 aa15.13■□□□□ 0.01
APOB-202ENST00000399256 LRRC14Q15048 493 aa15.13■□□□□ 0.01
APOB-202ENST00000399256 RFFLQ8WZ73 363 aa15.13■□□□□ 0.01
APOB-202ENST00000399256 PRCCQ92733 491 aaPredicted RBP15.13■□□□□ 0.01
APOB-202ENST00000399256 HOOK2Q96ED9 719 aa15.13■□□□□ 0.01
APOB-202ENST00000399256 NLRP3Q96P20 1036 aa15.13■□□□□ 0.01
APOB-202ENST00000399256 RTFDC1Q9BY42 306 aaPredicted RBP15.13■□□□□ 0.01
APOB-202ENST00000399256 INTUQ9ULD6 942 aa15.13■□□□□ 0.01
APOB-202ENST00000399256 TRAF3IP3Q9Y228 551 aa15.13■□□□□ 0.01
APOB-202ENST00000399256 DDX60LQ5H9U9 1706 aaKnown RBP15.13■□□□□ 0.01
APOB-202ENST00000399256 FERP16591 822 aa15.13■□□□□ 0.01
APOB-202ENST00000399256 CDC25CP30307 473 aa15.13■□□□□ 0.01
APOB-202ENST00000399256 PPP4CP60510 307 aa15.13■□□□□ 0.01
APOB-202ENST00000399256 CTNNBL1Q8WYA6 563 aaPredicted RBP15.13■□□□□ 0.01
APOB-202ENST00000399256 ALG3Q92685 438 aa15.13■□□□□ 0.01
APOB-202ENST00000399256 SLC35C1Q96A29 364 aa15.13■□□□□ 0.01
APOB-202ENST00000399256 IKZF4Q9H2S9 585 aa15.13■□□□□ 0.01
APOB-202ENST00000399256 JMJD4Q9H9V9 463 aa15.13■□□□□ 0.01
APOB-202ENST00000399256 ANKIB1Q9P2G1 1089 aa15.13■□□□□ 0.01
APOB-202ENST00000399256 C15orf41Q9Y2V0 281 aa15.13■□□□□ 0.01
APOB-202ENST00000399256 RTCBQ9Y3I0 505 aaKnown RBP15.13■□□□□ 0.01
APOB-202ENST00000399256 NR3C1P04150 777 aa15.12■□□□□ 0.01
APOB-202ENST00000399256 SLC16A2P36021 539 aa15.12■□□□□ 0.01
APOB-202ENST00000399256 STAT1P42224 750 aa15.12■□□□□ 0.01
APOB-202ENST00000399256 GIT2Q14161 759 aa15.12■□□□□ 0.01
APOB-202ENST00000399256 TTBK2Q6IQ55 1244 aa15.12■□□□□ 0.01
APOB-202ENST00000399256 CLEC4GQ6UXB4 293 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms