RNA–Protein interactions for RNA: ENST00000399017.6

TTC3-204, Transcript of tetratricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC3, Length 10,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-204ENST00000399017 KIF17Q9P2E2 1029 aa5.35□□□□□ -1.55
TTC3-204ENST00000399017 VPS51Q9UID3 782 aa5.35□□□□□ -1.55
TTC3-204ENST00000399017 FAF1Q9UNN5 650 aaPredicted RBP5.35□□□□□ -1.55
TTC3-204ENST00000399017 KDRP35968 1356 aa5.35□□□□□ -1.55
TTC3-204ENST00000399017 MAFGO15525 162 aa5.35□□□□□ -1.55
TTC3-204ENST00000399017 ORC4O43929 436 aa5.35□□□□□ -1.55
TTC3-204ENST00000399017 XYLBO75191 536 aa5.35□□□□□ -1.55
TTC3-204ENST00000399017 MYL1P05976 194 aa5.35□□□□□ -1.55
TTC3-204ENST00000399017 SFNP31947 248 aa5.35□□□□□ -1.55
TTC3-204ENST00000399017 ATP8B2P98198 1209 aa5.35□□□□□ -1.55
TTC3-204ENST00000399017 TRIM60Q495X7 471 aa5.35□□□□□ -1.55
TTC3-204ENST00000399017 TAF1BQ53T94 588 aaPredicted RBP5.35□□□□□ -1.55
TTC3-204ENST00000399017 TMEM237Q96Q45 408 aa5.35□□□□□ -1.55
TTC3-204ENST00000399017 PARVGQ9HBI0 331 aa5.35□□□□□ -1.55
TTC3-204ENST00000399017 RAD18Q9NS91 495 aa5.35□□□□□ -1.55
TTC3-204ENST00000399017 ABI3Q9P2A4 366 aa5.35□□□□□ -1.55
TTC3-204ENST00000399017 HDAC6Q9UBN7 1215 aa5.35□□□□□ -1.55
TTC3-204ENST00000399017 ZHX2Q9Y6X8 837 aa5.35□□□□□ -1.55
TTC3-204ENST00000399017 LAMC1P11047 1609 aa5.35□□□□□ -1.55
TTC3-204ENST00000399017 POLR3AO14802 1390 aaPredicted RBP5.35□□□□□ -1.55
TTC3-204ENST00000399017 CARMIL3Q8ND23 1372 aa5.35□□□□□ -1.55
TTC3-204ENST00000399017 TMEM232C9JQI7 657 aa5.34□□□□□ -1.55
TTC3-204ENST00000399017 SGSM2O43147 1006 aa5.34□□□□□ -1.55
TTC3-204ENST00000399017 C6orf222P0C671 652 aaPredicted RBP5.34□□□□□ -1.55
TTC3-204ENST00000399017 PSMC2P35998 433 aaKnown RBP5.34□□□□□ -1.55
TTC3-204ENST00000399017 CREMQ03060 361 aa5.34□□□□□ -1.55
TTC3-204ENST00000399017 AP3B2Q13367 1082 aa5.34□□□□□ -1.55
TTC3-204ENST00000399017 LRRC23Q53EV4 343 aaPredicted RBP5.34□□□□□ -1.55
TTC3-204ENST00000399017 POTEDQ86YR6 584 aa5.34□□□□□ -1.55
TTC3-204ENST00000399017 DTX3LQ8TDB6 740 aa5.34□□□□□ -1.55
TTC3-204ENST00000399017 SYMPKQ92797 1274 aaKnown RBP5.34□□□□□ -1.55
TTC3-204ENST00000399017 TNFSF13BQ9Y275 285 aa5.34□□□□□ -1.55
TTC3-204ENST00000399017 SYNJ2BP-COX16A0A087WUM0 186 aa5.34□□□□□ -1.55
TTC3-204ENST00000399017 HGSO14964 777 aaPredicted RBP5.34□□□□□ -1.55
TTC3-204ENST00000399017 GPAA1O43292 621 aa5.34□□□□□ -1.55
TTC3-204ENST00000399017 SLC12A1Q13621 1099 aa5.34□□□□□ -1.55
TTC3-204ENST00000399017 KCNB1Q14721 858 aa5.34□□□□□ -1.55
TTC3-204ENST00000399017 NCAPHQ15003 741 aa5.34□□□□□ -1.55
TTC3-204ENST00000399017 DGKDQ16760 1214 aa5.34□□□□□ -1.55
TTC3-204ENST00000399017 NOL9Q5SY16 702 aaKnown RBP5.34□□□□□ -1.55
TTC3-204ENST00000399017 SLFN13Q68D06 897 aa5.34□□□□□ -1.55
TTC3-204ENST00000399017 CYP26B1Q9NR63 512 aa5.34□□□□□ -1.55
TTC3-204ENST00000399017 TBC1D22BQ9NU19 505 aa5.34□□□□□ -1.55
TTC3-204ENST00000399017 COX16Q9P0S2 106 aa5.34□□□□□ -1.55
TTC3-204ENST00000399017 ERBB4Q15303 1308 aa5.34□□□□□ -1.55
TTC3-204ENST00000399017 RPTORQ8N122 1335 aa5.34□□□□□ -1.55
TTC3-204ENST00000399017 MAGEC1O60732 1142 aa5.34□□□□□ -1.55
TTC3-204ENST00000399017 SLC25A27O95847 323 aa5.34□□□□□ -1.55
TTC3-204ENST00000399017 URODP06132 367 aa5.34□□□□□ -1.55
TTC3-204ENST00000399017 CCDC130P13994 396 aa5.34□□□□□ -1.55
TTC3-204ENST00000399017 MX2P20592 715 aa5.34□□□□□ -1.55
TTC3-204ENST00000399017 RPS12P25398 132 aaKnown RBP5.34□□□□□ -1.55
TTC3-204ENST00000399017 HOXC12P31275 282 aa5.34□□□□□ -1.55
TTC3-204ENST00000399017 PTPN9P43378 593 aa5.34□□□□□ -1.55
TTC3-204ENST00000399017 GEMIN4P57678 1058 aaKnown RBP5.34□□□□□ -1.55
TTC3-204ENST00000399017 RPS6KA1Q15418 735 aa5.34□□□□□ -1.55
TTC3-204ENST00000399017 GSTA3Q16772 222 aa5.34□□□□□ -1.55
TTC3-204ENST00000399017 ESRP1Q6NXG1 681 aaKnown RBP5.34□□□□□ -1.55
TTC3-204ENST00000399017 C11orf88Q6PI97 169 aa5.34□□□□□ -1.55
TTC3-204ENST00000399017 DSG4Q86SJ6 1040 aa5.34□□□□□ -1.55
TTC3-204ENST00000399017 CDC26Q8NHZ8 85 aa5.34□□□□□ -1.55
TTC3-204ENST00000399017 ALKBH8Q96BT7 664 aaKnown RBP5.34□□□□□ -1.55
TTC3-204ENST00000399017 ACCSQ96QU6 501 aa5.34□□□□□ -1.55
TTC3-204ENST00000399017 KCNS3Q9BQ31 491 aa5.34□□□□□ -1.55
TTC3-204ENST00000399017 COLEC11Q9BWP8 271 aa5.34□□□□□ -1.55
TTC3-204ENST00000399017 OSBPL1AQ9BXW6 950 aa5.34□□□□□ -1.55
TTC3-204ENST00000399017 VPS9D1Q9Y2B5 631 aa5.34□□□□□ -1.55
TTC3-204ENST00000399017 RBM8AQ9Y5S9 174 aaKnown RBP5.34□□□□□ -1.55
TTC3-204ENST00000399017 MROH7-TTC4A0A0A0MT08 1334 aa5.34□□□□□ -1.55
TTC3-204ENST00000399017 RALGAPA1Q6GYQ0 2036 aa5.34□□□□□ -1.55
TTC3-204ENST00000399017 RPN2P04844 631 aa5.34□□□□□ -1.55
TTC3-204ENST00000399017 MMP10P09238 476 aa5.34□□□□□ -1.55
TTC3-204ENST00000399017 SP100P23497 879 aaPredicted RBP5.34□□□□□ -1.55
TTC3-204ENST00000399017 RGS4P49798 205 aa5.34□□□□□ -1.55
TTC3-204ENST00000399017 ARL4CP56559 192 aa5.34□□□□□ -1.55
TTC3-204ENST00000399017 NAA25Q14CX7 972 aa5.34□□□□□ -1.55
TTC3-204ENST00000399017 ZMYND11Q15326 602 aa5.34□□□□□ -1.55
TTC3-204ENST00000399017 SGO2Q562F6 1265 aa5.34□□□□□ -1.55
TTC3-204ENST00000399017 HDDC3Q8N4P3 179 aa5.34□□□□□ -1.55
TTC3-204ENST00000399017 DCLK2Q8N568 766 aa5.34□□□□□ -1.55
TTC3-204ENST00000399017 MLKLQ8NB16 471 aa5.34□□□□□ -1.55
TTC3-204ENST00000399017 C14orf93Q9H972 538 aaKnown RBP5.34□□□□□ -1.55
TTC3-204ENST00000399017 CCDC177Q9NQR7 707 aaPredicted RBP5.34□□□□□ -1.55
TTC3-204ENST00000399017 IARS2Q9NSE4 1012 aaKnown RBP5.34□□□□□ -1.55
TTC3-204ENST00000399017 LNPEPQ9UIQ6 1025 aa5.34□□□□□ -1.55
TTC3-204ENST00000399017 GUCA1BQ9UMX6 200 aa5.34□□□□□ -1.55
TTC3-204ENST00000399017 ZNF148Q9UQR1 794 aa5.34□□□□□ -1.55
TTC3-204ENST00000399017 ANKARQ7Z5J8 1434 aa5.34□□□□□ -1.55
TTC3-204ENST00000399017 RRN3P2A6NIE6 340 aa5.34□□□□□ -1.55
TTC3-204ENST00000399017 TJP3O95049 919 aa5.34□□□□□ -1.55
TTC3-204ENST00000399017 AARSP49588 968 aaKnown RBP eCLIP5.34□□□□□ -1.555e-6■■■□□ 16
TTC3-204ENST00000399017 HUNKP57058 714 aa5.34□□□□□ -1.55
TTC3-204ENST00000399017 TRIM58Q8NG06 486 aa5.34□□□□□ -1.55
TTC3-204ENST00000399017 MRPL4Q9BYD3 311 aaKnown RBP5.34□□□□□ -1.55
TTC3-204ENST00000399017 USP18Q9UMW8 372 aa5.34□□□□□ -1.55
TTC3-204ENST00000399017 DNMT1P26358 1616 aaKnown RBP5.34□□□□□ -1.55
TTC3-204ENST00000399017 AP1G2O75843 785 aa5.34□□□□□ -1.55
TTC3-204ENST00000399017 PRAMEP78395 509 aa5.34□□□□□ -1.55
TTC3-204ENST00000399017 PHLDB3Q6NSJ2 640 aa5.34□□□□□ -1.55
TTC3-204ENST00000399017 PPP4R3CPQ6ZMV5 832 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms