RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 HP1BP3Q5SSJ5 553 aaPredicted RBP15.32■□□□□ 0.04
PCDHA11-201ENST00000398640 LDHDQ86WU2 507 aa15.32■□□□□ 0.04
PCDHA11-201ENST00000398640 ERO1BQ86YB8 467 aa15.32■□□□□ 0.04
PCDHA11-201ENST00000398640 RHPN2Q8IUC4 686 aa15.32■□□□□ 0.04
PCDHA11-201ENST00000398640 PDCD6IPQ8WUM4 868 aaKnown RBP15.32■□□□□ 0.04
PCDHA11-201ENST00000398640 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.32■□□□□ 0.04
PCDHA11-201ENST00000398640 MAGEF1Q9HAY2 307 aa15.32■□□□□ 0.04
PCDHA11-201ENST00000398640 PARVGQ9HBI0 331 aa15.32■□□□□ 0.04
PCDHA11-201ENST00000398640 RGS2P41220 211 aa15.32■□□□□ 0.04
PCDHA11-201ENST00000398640 COG7P83436 770 aa15.32■□□□□ 0.04
PCDHA11-201ENST00000398640 BRD3Q15059 726 aa15.32■□□□□ 0.04
PCDHA11-201ENST00000398640 HSPH1Q92598 858 aa15.32■□□□□ 0.04
PCDHA11-201ENST00000398640 KATNAL1Q9BW62 490 aa15.32■□□□□ 0.04
PCDHA11-201ENST00000398640 PPP6R2O75170 966 aa15.31■□□□□ 0.04
PCDHA11-201ENST00000398640 SLC35F6Q8N357 371 aa15.31■□□□□ 0.04
PCDHA11-201ENST00000398640 MAN1B1Q9UKM7 699 aa15.31■□□□□ 0.04
PCDHA11-201ENST00000398640 RFX7Q2KHR2 1363 aa15.31■□□□□ 0.04
PCDHA11-201ENST00000398640 EFCAB8A8MWE9 144 aa15.31■□□□□ 0.04
PCDHA11-201ENST00000398640 FTCDO95954 541 aa15.31■□□□□ 0.04
PCDHA11-201ENST00000398640 PLA2G4BP0C869 781 aa15.31■□□□□ 0.04
PCDHA11-201ENST00000398640 SLC39A14Q15043 492 aa15.31■□□□□ 0.04
PCDHA11-201ENST00000398640 TMED2Q15363 201 aa15.31■□□□□ 0.04
PCDHA11-201ENST00000398640 TMTC3Q6ZXV5 915 aa15.31■□□□□ 0.04
PCDHA11-201ENST00000398640 YAF2Q8IY57 180 aa15.31■□□□□ 0.04
PCDHA11-201ENST00000398640 TTC25Q96NG3 672 aa15.31■□□□□ 0.04
PCDHA11-201ENST00000398640 GSG1L2A8MUP6 293 aa15.31■□□□□ 0.04
PCDHA11-201ENST00000398640 IFNAR1P17181 557 aa15.31■□□□□ 0.04
PCDHA11-201ENST00000398640 RECQLP46063 649 aaPredicted RBP15.31■□□□□ 0.04
PCDHA11-201ENST00000398640 ALX1Q15699 326 aa15.31■□□□□ 0.04
PCDHA11-201ENST00000398640 ZNF394Q53GI3 561 aa15.31■□□□□ 0.04
PCDHA11-201ENST00000398640 SIRT2Q8IXJ6 389 aa15.31■□□□□ 0.04
PCDHA11-201ENST00000398640 SDCCAG3Q96C92 435 aa15.31■□□□□ 0.04
PCDHA11-201ENST00000398640 MANSC4A6NHS7 340 aaPredicted RBP15.31■□□□□ 0.04
PCDHA11-201ENST00000398640 SMIM24O75264 130 aa15.31■□□□□ 0.04
PCDHA11-201ENST00000398640 MMP1P03956 469 aa15.31■□□□□ 0.04
PCDHA11-201ENST00000398640 CIITAP33076 1130 aa15.31■□□□□ 0.04
PCDHA11-201ENST00000398640 DPCR1Q3MIW9 517 aa15.31■□□□□ 0.04
PCDHA11-201ENST00000398640 ZNF658Q5TYW1 1059 aaPredicted RBP15.31■□□□□ 0.04
PCDHA11-201ENST00000398640 NSUN7Q8NE18 718 aaKnown RBP15.31■□□□□ 0.04
PCDHA11-201ENST00000398640 AIFM3Q96NN9 605 aa15.31■□□□□ 0.04
PCDHA11-201ENST00000398640 CAPS2Q9BXY5 557 aa15.31■□□□□ 0.04
PCDHA11-201ENST00000398640 CUEDC2Q9H467 287 aa15.31■□□□□ 0.04
PCDHA11-201ENST00000398640 ZWILCHQ9H900 591 aa15.31■□□□□ 0.04
PCDHA11-201ENST00000398640 CAPN7Q9Y6W3 813 aa15.31■□□□□ 0.04
PCDHA11-201ENST00000398640 DISP2A7MBM2 1401 aa15.31■□□□□ 0.04
PCDHA11-201ENST00000398640 LARGE1O95461 756 aa15.31■□□□□ 0.04
PCDHA11-201ENST00000398640 C6orf222P0C671 652 aaPredicted RBP15.31■□□□□ 0.04
PCDHA11-201ENST00000398640 TXNP10599 105 aaKnown RBP15.31■□□□□ 0.04
PCDHA11-201ENST00000398640 MAP3K21Q5TCX8 1036 aa15.31■□□□□ 0.04
PCDHA11-201ENST00000398640 VCX3AQ9NNX9 186 aa15.31■□□□□ 0.04
PCDHA11-201ENST00000398640 EMILIN3Q9NT22 766 aa15.31■□□□□ 0.04
PCDHA11-201ENST00000398640 RGL2O15211 777 aa15.3■□□□□ 0.04
PCDHA11-201ENST00000398640 KRT76Q01546 638 aa15.3■□□□□ 0.04
PCDHA11-201ENST00000398640 ZKSCAN4Q969J2 545 aaPredicted RBP15.3■□□□□ 0.04
PCDHA11-201ENST00000398640 CPVLQ9H3G5 476 aa15.3■□□□□ 0.04
PCDHA11-201ENST00000398640 KIF28PB7ZC32 967 aa15.3■□□□□ 0.04
PCDHA11-201ENST00000398640 ORC4O43929 436 aa15.3■□□□□ 0.04
PCDHA11-201ENST00000398640 PRPSAP2O60256 369 aa15.3■□□□□ 0.04
PCDHA11-201ENST00000398640 UPP2O95045 317 aa15.3■□□□□ 0.04
PCDHA11-201ENST00000398640 PLCG1P19174 1290 aa15.3■□□□□ 0.04
PCDHA11-201ENST00000398640 FAM117BQ6P1L5 589 aa15.3■□□□□ 0.04
PCDHA11-201ENST00000398640 TRIM11Q96F44 468 aa15.3■□□□□ 0.04
PCDHA11-201ENST00000398640 DHTKD1Q96HY7 919 aaPredicted RBP15.3■□□□□ 0.04
PCDHA11-201ENST00000398640 PXDNLA1KZ92 1463 aa15.3■□□□□ 0.04
PCDHA11-201ENST00000398640 PHKA2P46019 1235 aa15.3■□□□□ 0.04
PCDHA11-201ENST00000398640 GSDMAQ96QA5 445 aa15.3■□□□□ 0.04
PCDHA11-201ENST00000398640 STK17AQ9UEE5 414 aa15.3■□□□□ 0.04
PCDHA11-201ENST00000398640 TBK1Q9UHD2 729 aa15.3■□□□□ 0.04
PCDHA11-201ENST00000398640 SART1O43290 800 aaKnown RBP15.3■□□□□ 0.04
PCDHA11-201ENST00000398640 PLTPP55058 493 aa15.3■□□□□ 0.04
PCDHA11-201ENST00000398640 TSPY1Q01534 308 aa15.3■□□□□ 0.04
PCDHA11-201ENST00000398640 QRICH1Q2TAL8 776 aa15.3■□□□□ 0.04
PCDHA11-201ENST00000398640 ACCSLQ4AC99 568 aa15.3■□□□□ 0.04
PCDHA11-201ENST00000398640 ATP6V0A4Q9HBG4 840 aa15.3■□□□□ 0.04
PCDHA11-201ENST00000398640 IFT122Q9HBG6 1241 aa15.3■□□□□ 0.04
PCDHA11-201ENST00000398640 SOWAHDA6NJG2 315 aa15.3■□□□□ 0.04
PCDHA11-201ENST00000398640 LMNB2Q03252 620 aa15.3■□□□□ 0.04
PCDHA11-201ENST00000398640 HACD3Q9P035 362 aa15.3■□□□□ 0.04
PCDHA11-201ENST00000398640 G3BP2Q9UN86 482 aaKnown RBP15.3■□□□□ 0.04
PCDHA11-201ENST00000398640 ZNF467Q7Z7K2 595 aaPredicted RBP15.29■□□□□ 0.04
PCDHA11-201ENST00000398640 EXT2Q93063 718 aa15.29■□□□□ 0.04
PCDHA11-201ENST00000398640 PHLPP2Q6ZVD8 1323 aa15.29■□□□□ 0.04
PCDHA11-201ENST00000398640 ACRBPQ8NEB7 543 aa15.29■□□□□ 0.04
PCDHA11-201ENST00000398640 MAN2A1Q16706 1144 aa15.29■□□□□ 0.04
PCDHA11-201ENST00000398640 EFCAB13Q8IY85 973 aa15.29■□□□□ 0.04
PCDHA11-201ENST00000398640 VCPKMTQ9H867 229 aa15.29■□□□□ 0.04
PCDHA11-201ENST00000398640 PCDHB6Q9Y5E3 794 aa15.29■□□□□ 0.04
PCDHA11-201ENST00000398640 PFASO15067 1338 aa15.29■□□□□ 0.04
PCDHA11-201ENST00000398640 PRELPP51888 382 aa15.29■□□□□ 0.04
PCDHA11-201ENST00000398640 ARL13BQ3SXY8 428 aa15.29■□□□□ 0.04
PCDHA11-201ENST00000398640 ZNF568Q3ZCX4 644 aa15.29■□□□□ 0.04
PCDHA11-201ENST00000398640 RNF180Q86T96 592 aa15.29■□□□□ 0.04
PCDHA11-201ENST00000398640 OPTNQ96CV9 577 aa15.29■□□□□ 0.04
PCDHA11-201ENST00000398640 ZNF512BQ96KM6 892 aaPredicted RBP15.29■□□□□ 0.04
PCDHA11-201ENST00000398640 GLIS2Q9BZE0 524 aaPredicted RBP15.29■□□□□ 0.04
PCDHA11-201ENST00000398640 NYAP2Q9P242 653 aa15.29■□□□□ 0.04
PCDHA11-201ENST00000398640 ATP8A1Q9Y2Q0 1164 aa15.29■□□□□ 0.04
PCDHA11-201ENST00000398640 LRRD1A4D1F6 860 aa15.29■□□□□ 0.04
PCDHA11-201ENST00000398640 DYNC1LI2O43237 492 aaPredicted RBP15.29■□□□□ 0.04
PCDHA11-201ENST00000398640 MSH2P43246 934 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms