RNA–Protein interactions for RNA: ENST00000398179.3

CCBE1-201, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 5 BASIC

Gene CCBE1, Length 5,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-201ENST00000398179 CCDC8Q9H0W5 538 aaPredicted RBP13.64□□□□□ -0.23
CCBE1-201ENST00000398179 TULP2O00295 520 aa13.64□□□□□ -0.23
CCBE1-201ENST00000398179 CYP4A11Q02928 519 aa13.64□□□□□ -0.23
CCBE1-201ENST00000398179 C8orf34Q49A92 452 aa13.64□□□□□ -0.23
CCBE1-201ENST00000398179 CYP4A22Q5TCH4 519 aa13.64□□□□□ -0.23
CCBE1-201ENST00000398179 TTC29Q8NA56 475 aaPredicted RBP13.64□□□□□ -0.23
CCBE1-201ENST00000398179 IRF2BPLQ9H1B7 796 aa13.64□□□□□ -0.23
CCBE1-201ENST00000398179 MED21Q13503 144 aa13.64□□□□□ -0.23
CCBE1-201ENST00000398179 BFSP2Q13515 415 aa13.64□□□□□ -0.23
CCBE1-201ENST00000398179 SFMBT2Q5VUG0 894 aa13.64□□□□□ -0.23
CCBE1-201ENST00000398179 NAA35Q5VZE5 725 aa13.64□□□□□ -0.23
CCBE1-201ENST00000398179 SMIM15Q7Z3B0 74 aa13.64□□□□□ -0.23
CCBE1-201ENST00000398179 FYCO1Q9BQS8 1478 aa13.64□□□□□ -0.23
CCBE1-201ENST00000398179 AMPD3Q01432 767 aa13.64□□□□□ -0.23
CCBE1-201ENST00000398179 TOM1L2Q6ZVM7 507 aa13.64□□□□□ -0.23
CCBE1-201ENST00000398179 SPARTQ8N0X7 666 aa13.64□□□□□ -0.23
CCBE1-201ENST00000398179 NT5C3AQ9H0P0 336 aa13.64□□□□□ -0.23
CCBE1-201ENST00000398179 FBXO28Q9NVF7 368 aa13.64□□□□□ -0.23
CCBE1-201ENST00000398179 AP4S1Q9Y587 144 aa13.64□□□□□ -0.23
CCBE1-201ENST00000398179 FGD5Q6ZNL6 1462 aa13.63□□□□□ -0.23
CCBE1-201ENST00000398179 PYGLP06737 847 aa13.63□□□□□ -0.23
CCBE1-201ENST00000398179 TMPOP42166 694 aaKnown RBP13.63□□□□□ -0.23
CCBE1-201ENST00000398179 KANK3Q6NY19 840 aa13.63□□□□□ -0.23
CCBE1-201ENST00000398179 ANKRD13DQ6ZTN6 518 aa13.63□□□□□ -0.23
CCBE1-201ENST00000398179 SRPK1Q96SB4 655 aaKnown RBP13.63□□□□□ -0.23
CCBE1-201ENST00000398179 IFNKQ9P0W0 207 aa13.63□□□□□ -0.23
CCBE1-201ENST00000398179 A0A1W2PRQ8 180 aa13.63□□□□□ -0.23
CCBE1-201ENST00000398179 PRR23D1E9PI22 279 aaPredicted RBP13.63□□□□□ -0.23
CCBE1-201ENST00000398179 PRR23D2P0DMB1 279 aaPredicted RBP13.63□□□□□ -0.23
CCBE1-201ENST00000398179 MYCLP12524 364 aaPredicted RBP13.63□□□□□ -0.23
CCBE1-201ENST00000398179 SCG2P13521 617 aa13.63□□□□□ -0.23
CCBE1-201ENST00000398179 PSMC6P62333 389 aa13.63□□□□□ -0.23
CCBE1-201ENST00000398179 REXO1Q8N1G1 1221 aaKnown RBP13.63□□□□□ -0.23
CCBE1-201ENST00000398179 DQX1Q8TE96 717 aaKnown RBP13.63□□□□□ -0.23
CCBE1-201ENST00000398179 ERP27Q96DN0 273 aa13.63□□□□□ -0.23
CCBE1-201ENST00000398179 FOXP3Q9BZS1 431 aa13.63□□□□□ -0.23
CCBE1-201ENST00000398179 SLC40A1Q9NP59 571 aa13.63□□□□□ -0.23
CCBE1-201ENST00000398179 SGTAO43765 313 aa13.63□□□□□ -0.23
CCBE1-201ENST00000398179 CHEK2O96017 543 aa13.63□□□□□ -0.23
CCBE1-201ENST00000398179 PRKAR2AP13861 404 aaKnown RBP13.63□□□□□ -0.23
CCBE1-201ENST00000398179 SLC9A1P19634 815 aa13.63□□□□□ -0.23
CCBE1-201ENST00000398179 HADHQ16836 314 aaKnown RBP13.63□□□□□ -0.23
CCBE1-201ENST00000398179 TTC22Q5TAA0 569 aa13.63□□□□□ -0.23
CCBE1-201ENST00000398179 LRRC8BQ6P9F7 803 aa13.63□□□□□ -0.23
CCBE1-201ENST00000398179 PACS2Q86VP3 889 aa13.63□□□□□ -0.23
CCBE1-201ENST00000398179 IL17RAQ96F46 866 aa13.63□□□□□ -0.23
CCBE1-201ENST00000398179 FANCFQ9NPI8 374 aa13.63□□□□□ -0.23
CCBE1-201ENST00000398179 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.63□□□□□ -0.23
CCBE1-201ENST00000398179 NTRK1P04629 796 aa13.63□□□□□ -0.23
CCBE1-201ENST00000398179 JAK1P23458 1154 aa13.63□□□□□ -0.23
CCBE1-201ENST00000398179 CLHC1Q8NHS4 586 aa13.63□□□□□ -0.23
CCBE1-201ENST00000398179 UTP15Q8TED0 518 aaKnown RBP13.63□□□□□ -0.23
CCBE1-201ENST00000398179 VPS39Q96JC1 886 aa13.63□□□□□ -0.23
CCBE1-201ENST00000398179 HERC2P3Q9BVR0 1158 aa13.63□□□□□ -0.23
CCBE1-201ENST00000398179 PARD6BQ9BYG5 372 aa13.63□□□□□ -0.23
CCBE1-201ENST00000398179 C8orf33Q9H7E9 229 aaPredicted RBP13.63□□□□□ -0.23
CCBE1-201ENST00000398179 USP16Q9Y5T5 823 aa13.63□□□□□ -0.23
CCBE1-201ENST00000398179 VWA5AO00534 786 aa13.62□□□□□ -0.23
CCBE1-201ENST00000398179 SYNCRIPO60506 623 aaKnown RBP13.62□□□□□ -0.23
CCBE1-201ENST00000398179 RBP3P10745 1247 aa13.62□□□□□ -0.23
CCBE1-201ENST00000398179 RASA2Q15283 850 aa13.62□□□□□ -0.23
CCBE1-201ENST00000398179 TMEM266Q2M3C6 531 aa13.62□□□□□ -0.23
CCBE1-201ENST00000398179 DNAJB7Q7Z6W7 309 aaPredicted RBP13.62□□□□□ -0.23
CCBE1-201ENST00000398179 SPICE1Q8N0Z3 855 aa13.62□□□□□ -0.23
CCBE1-201ENST00000398179 FAM25EA8MYX2 175 aa13.62□□□□□ -0.23
CCBE1-201ENST00000398179 PFDN6O15212 129 aa13.62□□□□□ -0.23
CCBE1-201ENST00000398179 FAM228BP0C875 321 aa13.62□□□□□ -0.23
CCBE1-201ENST00000398179 MCM7P33993 719 aa13.62□□□□□ -0.23
CCBE1-201ENST00000398179 STARP49675 285 aa13.62□□□□□ -0.23
CCBE1-201ENST00000398179 ATP1A2P50993 1020 aa13.62□□□□□ -0.23
CCBE1-201ENST00000398179 DLG1Q12959 904 aa13.62□□□□□ -0.23
CCBE1-201ENST00000398179 FAM76BQ5HYJ3 339 aa13.62□□□□□ -0.23
CCBE1-201ENST00000398179 PLGRKTQ9HBL7 147 aa13.62□□□□□ -0.23
CCBE1-201ENST00000398179 RPRD1BQ9NQG5 326 aaKnown RBP13.62□□□□□ -0.23
CCBE1-201ENST00000398179 AMOTL2Q9Y2J4 779 aa13.62□□□□□ -0.23
CCBE1-201ENST00000398179 ERBINQ96RT1 1412 aa13.62□□□□□ -0.23
CCBE1-201ENST00000398179 TTC4O95801 387 aa13.62□□□□□ -0.23
CCBE1-201ENST00000398179 F13A1P00488 732 aa13.62□□□□□ -0.23
CCBE1-201ENST00000398179 GTF2H1P32780 548 aa13.62□□□□□ -0.23
CCBE1-201ENST00000398179 DDI2Q5TDH0 399 aa13.62□□□□□ -0.23
CCBE1-201ENST00000398179 KRT26Q7Z3Y9 468 aa13.62□□□□□ -0.23
CCBE1-201ENST00000398179 ZNF710Q8N1W2 664 aa13.62□□□□□ -0.23
CCBE1-201ENST00000398179 ZSCAN16Q9H4T2 348 aaPredicted RBP13.62□□□□□ -0.23
CCBE1-201ENST00000398179 MARCH7Q9H992 704 aa13.62□□□□□ -0.23
CCBE1-201ENST00000398179 ING3Q9NXR8 418 aa13.62□□□□□ -0.23
CCBE1-201ENST00000398179 CFTRP13569 1480 aa13.62□□□□□ -0.23
CCBE1-201ENST00000398179 TOP2BQ02880 1626 aa13.62□□□□□ -0.23
CCBE1-201ENST00000398179 A0A1W2PQ72 361 aa13.62□□□□□ -0.23
CCBE1-201ENST00000398179 SPDYE5A6NIY4 337 aa13.62□□□□□ -0.23
CCBE1-201ENST00000398179 CDH3P22223 829 aa13.62□□□□□ -0.23
CCBE1-201ENST00000398179 CYP4F8P98187 520 aa13.62□□□□□ -0.23
CCBE1-201ENST00000398179 PTK2Q05397 1052 aa13.62□□□□□ -0.23
CCBE1-201ENST00000398179 EXOC3L4Q17RC7 722 aa13.62□□□□□ -0.23
CCBE1-201ENST00000398179 CCDC28AQ8IWP9 274 aa13.62□□□□□ -0.23
CCBE1-201ENST00000398179 ZSCAN29Q8IWY8 852 aaPredicted RBP13.62□□□□□ -0.23
CCBE1-201ENST00000398179 HPS3Q969F9 1004 aa13.62□□□□□ -0.23
CCBE1-201ENST00000398179 SNX13Q9Y5W8 968 aa13.62□□□□□ -0.23
CCBE1-201ENST00000398179 GPRASP1Q5JY77 1395 aa13.62□□□□□ -0.23
CCBE1-201ENST00000398179 PLEKHG2Q9H7P9 1386 aa13.62□□□□□ -0.23
CCBE1-201ENST00000398179 MYOM3Q5VTT5 1437 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms