RNA–Protein interactions for RNA: ENST00000397942.3

SOCS6-201, Transcript of suppressor of cytokine signaling 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOCS6, Length 5,848 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS6-201ENST00000397942 CARSP49589 748 aaKnown RBP13.37□□□□□ -0.27
SOCS6-201ENST00000397942 BEND6Q5SZJ8 279 aaPredicted RBP13.37□□□□□ -0.27
SOCS6-201ENST00000397942 TBC1D1Q86TI0 1168 aaPredicted RBP13.37□□□□□ -0.27
SOCS6-201ENST00000397942 TRIM59Q8IWR1 403 aa13.37□□□□□ -0.27
SOCS6-201ENST00000397942 GOLPH3Q9H4A6 298 aa13.37□□□□□ -0.27
SOCS6-201ENST00000397942 SLITRK6Q9H5Y7 841 aa13.37□□□□□ -0.27
SOCS6-201ENST00000397942 RBM12Q9NTZ6 932 aaKnown RBP13.37□□□□□ -0.27
SOCS6-201ENST00000397942 SUGT1Q9Y2Z0 365 aa13.37□□□□□ -0.27
SOCS6-201ENST00000397942 A0A087X0T9 212 aa13.36□□□□□ -0.27
SOCS6-201ENST00000397942 PALM3A6NDB9 673 aaPredicted RBP13.36□□□□□ -0.27
SOCS6-201ENST00000397942 KRT1P04264 644 aa13.36□□□□□ -0.27
SOCS6-201ENST00000397942 FAM228BP0C875 321 aa13.36□□□□□ -0.27
SOCS6-201ENST00000397942 KLK7P49862 253 aa13.36□□□□□ -0.27
SOCS6-201ENST00000397942 KRT39Q6A163 491 aa13.36□□□□□ -0.27
SOCS6-201ENST00000397942 TRIM50Q86XT4 487 aa13.36□□□□□ -0.27
SOCS6-201ENST00000397942 SRRM1Q8IYB3 904 aaKnown RBP13.36□□□□□ -0.27
SOCS6-201ENST00000397942 NOC2LQ9Y3T9 749 aaKnown RBP13.36□□□□□ -0.27
SOCS6-201ENST00000397942 EARS2Q5JPH6 523 aaKnown RBP13.36□□□□□ -0.27
SOCS6-201ENST00000397942 C16orf86Q6ZW13 317 aa13.36□□□□□ -0.27
SOCS6-201ENST00000397942 RAB3IL1Q8TBN0 382 aa13.36□□□□□ -0.27
SOCS6-201ENST00000397942 MLXIPLQ9NP71 852 aa13.36□□□□□ -0.27
SOCS6-201ENST00000397942 ODF2LQ9ULJ1 636 aa13.36□□□□□ -0.27
SOCS6-201ENST00000397942 PDS5AQ29RF7 1337 aaKnown RBP13.36□□□□□ -0.27
SOCS6-201ENST00000397942 TXNDC9O14530 226 aa13.36□□□□□ -0.27
SOCS6-201ENST00000397942 SESN3P58005 492 aa13.36□□□□□ -0.27
SOCS6-201ENST00000397942 GUCY1A3Q02108 690 aa13.36□□□□□ -0.27
SOCS6-201ENST00000397942 RC3H1Q5TC82 1133 aaKnown RBP13.36□□□□□ -0.27
SOCS6-201ENST00000397942 FAM160B1Q5W0V3 765 aa13.36□□□□□ -0.27
SOCS6-201ENST00000397942 FAM47EQ6ZV65 393 aa13.36□□□□□ -0.27
SOCS6-201ENST00000397942 TMEM35BQ8NCS4 154 aa13.36□□□□□ -0.27
SOCS6-201ENST00000397942 ATP6V1G3Q96LB4 118 aa13.36□□□□□ -0.27
SOCS6-201ENST00000397942 CFAP57Q96MR6 1250 aa13.36□□□□□ -0.27
SOCS6-201ENST00000397942 GUCY2CP25092 1073 aa13.36□□□□□ -0.27
SOCS6-201ENST00000397942 EPHA7Q15375 998 aa13.36□□□□□ -0.27
SOCS6-201ENST00000397942 PKN1Q16512 942 aa13.36□□□□□ -0.27
SOCS6-201ENST00000397942 TRIM68Q6AZZ1 485 aa13.36□□□□□ -0.27
SOCS6-201ENST00000397942 JMJD4Q9H9V9 463 aa13.36□□□□□ -0.27
SOCS6-201ENST00000397942 NGRNQ9NPE2 291 aaKnown RBP13.36□□□□□ -0.27
SOCS6-201ENST00000397942 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.36□□□□□ -0.27
SOCS6-201ENST00000397942 OVOS2A0A0G2JMS6 1433 aa13.35□□□□□ -0.27
SOCS6-201ENST00000397942 NPHP3-ACAD11A0A0J9YXS1 232 aa13.35□□□□□ -0.27
SOCS6-201ENST00000397942 SLC12A2P55011 1212 aa13.35□□□□□ -0.27
SOCS6-201ENST00000397942 KRT76Q01546 638 aa13.35□□□□□ -0.27
SOCS6-201ENST00000397942 MMS22LQ6ZRQ5 1243 aa13.35□□□□□ -0.27
SOCS6-201ENST00000397942 SAAL1Q96ER3 474 aa13.35□□□□□ -0.27
SOCS6-201ENST00000397942 ACTR5Q9H9F9 607 aaPredicted RBP13.35□□□□□ -0.27
SOCS6-201ENST00000397942 GADL1Q6ZQY3 521 aa13.35□□□□□ -0.27
SOCS6-201ENST00000397942 RNF25Q96BH1 459 aaPredicted RBP13.35□□□□□ -0.27
SOCS6-201ENST00000397942 PNKPQ96T60 521 aa13.35□□□□□ -0.27
SOCS6-201ENST00000397942 REEP2Q9BRK0 252 aa13.35□□□□□ -0.27
SOCS6-201ENST00000397942 TRIM66O15016 1216 aa13.35□□□□□ -0.27
SOCS6-201ENST00000397942 EVI5O60447 810 aa13.35□□□□□ -0.27
SOCS6-201ENST00000397942 TMEM270Q6UE05 265 aa13.35□□□□□ -0.27
SOCS6-201ENST00000397942 SPATA24Q86W54 205 aa13.35□□□□□ -0.27
SOCS6-201ENST00000397942 LDHDQ86WU2 507 aa13.35□□□□□ -0.27
SOCS6-201ENST00000397942 FAM213AQ9BRX8 229 aa13.35□□□□□ -0.27
SOCS6-201ENST00000397942 MSTO1Q9BUK6 570 aa13.35□□□□□ -0.27
SOCS6-201ENST00000397942 VCX3BQ9H321 246 aa13.35□□□□□ -0.27
SOCS6-201ENST00000397942 RAVER2Q9HCJ3 691 aaKnown RBP13.35□□□□□ -0.27
SOCS6-201ENST00000397942 FHOD1Q9Y613 1164 aa13.35□□□□□ -0.27
SOCS6-201ENST00000397942 GRID2IPA4D2P6 1211 aa13.35□□□□□ -0.27
SOCS6-201ENST00000397942 CLDN3O15551 220 aa13.35□□□□□ -0.27
SOCS6-201ENST00000397942 MT-ND3P03897 115 aa13.35□□□□□ -0.27
SOCS6-201ENST00000397942 RPA1P27694 616 aa13.35□□□□□ -0.27
SOCS6-201ENST00000397942 CIAPIN1Q6FI81 312 aa13.35□□□□□ -0.27
SOCS6-201ENST00000397942 CENPPQ6IPU0 288 aa13.35□□□□□ -0.27
SOCS6-201ENST00000397942 IL17RAQ96F46 866 aa13.35□□□□□ -0.27
SOCS6-201ENST00000397942 SALL1Q9NSC2 1324 aa13.35□□□□□ -0.27
SOCS6-201ENST00000397942 WDR91A4D1P6 747 aa13.35□□□□□ -0.27
SOCS6-201ENST00000397942 PSAPP07602 524 aa13.35□□□□□ -0.27
SOCS6-201ENST00000397942 SOX5P35711 763 aa13.35□□□□□ -0.27
SOCS6-201ENST00000397942 MSH2P43246 934 aa13.35□□□□□ -0.27
SOCS6-201ENST00000397942 IRAK1P51617 712 aa13.35□□□□□ -0.27
SOCS6-201ENST00000397942 PPP1R2P3Q6NXS1 205 aa13.35□□□□□ -0.27
SOCS6-201ENST00000397942 ERICH1Q86X53 443 aa13.35□□□□□ -0.27
SOCS6-201ENST00000397942 RNF169Q8NCN4 708 aa13.35□□□□□ -0.27
SOCS6-201ENST00000397942 GABPB2Q8TAK5 448 aaPredicted RBP13.35□□□□□ -0.27
SOCS6-201ENST00000397942 PITPNM3Q9BZ71 974 aa13.35□□□□□ -0.27
SOCS6-201ENST00000397942 HERC5Q9UII4 1024 aaKnown RBP13.35□□□□□ -0.27
SOCS6-201ENST00000397942 TTC7AQ9ULT0 858 aaPredicted RBP13.35□□□□□ -0.27
SOCS6-201ENST00000397942 DIS3Q9Y2L1 958 aaKnown RBP13.35□□□□□ -0.27
SOCS6-201ENST00000397942 CHRNA3P32297 505 aa13.34□□□□□ -0.27
SOCS6-201ENST00000397942 TRIM65Q6PJ69 517 aa13.34□□□□□ -0.27
SOCS6-201ENST00000397942 GDAP1Q8TB36 358 aa13.34□□□□□ -0.27
SOCS6-201ENST00000397942 PYROXD1Q8WU10 500 aa13.34□□□□□ -0.27
SOCS6-201ENST00000397942 ZC3H13Q5T200 1668 aaKnown RBP13.34□□□□□ -0.27
SOCS6-201ENST00000397942 SYNJ2BP-COX16A0A087WUM0 186 aa13.34□□□□□ -0.27
SOCS6-201ENST00000397942 MCF2LO15068 1137 aa13.34□□□□□ -0.27
SOCS6-201ENST00000397942 BRAFP15056 766 aa13.34□□□□□ -0.27
SOCS6-201ENST00000397942 PPP2R2AP63151 447 aa13.34□□□□□ -0.27
SOCS6-201ENST00000397942 ADGRA1Q86SQ6 560 aa13.34□□□□□ -0.27
SOCS6-201ENST00000397942 ZBTB33Q86T24 672 aa13.34□□□□□ -0.27
SOCS6-201ENST00000397942 FBXL13Q8NEE6 735 aa13.34□□□□□ -0.27
SOCS6-201ENST00000397942 ZNF564Q8TBZ8 553 aaPredicted RBP13.34□□□□□ -0.27
SOCS6-201ENST00000397942 RAB3IPQ96QF0 476 aaPredicted RBP13.34□□□□□ -0.27
SOCS6-201ENST00000397942 VCXQ9H320 206 aa13.34□□□□□ -0.27
SOCS6-201ENST00000397942 RNF146Q9NTX7 359 aa13.34□□□□□ -0.27
SOCS6-201ENST00000397942 COX16Q9P0S2 106 aa13.34□□□□□ -0.27
SOCS6-201ENST00000397942 NYAP2Q9P242 653 aa13.34□□□□□ -0.27
SOCS6-201ENST00000397942 URB1O60287 2271 aaKnown RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms