RNA–Protein interactions for RNA: ENST00000397537.2

SMCO1-201, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO1, Length 1,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-201ENST00000397537 OXSMQ9NWU1 459 aa7.61□□□□□ -1.19
SMCO1-201ENST00000397537 CLTCQ00610 1675 aaKnown RBP7.6□□□□□ -1.19
SMCO1-201ENST00000397537 DEPDC5O75140 1603 aa7.6□□□□□ -1.19
SMCO1-201ENST00000397537 IPO5O00410 1097 aaKnown RBP7.6□□□□□ -1.19
SMCO1-201ENST00000397537 STARD3NLO95772 234 aa7.6□□□□□ -1.19
SMCO1-201ENST00000397537 DESP17661 470 aa7.6□□□□□ -1.19
SMCO1-201ENST00000397537 HSPA7P48741 367 aa7.6□□□□□ -1.19
SMCO1-201ENST00000397537 NRG1Q02297 640 aaPredicted RBP7.6□□□□□ -1.19
SMCO1-201ENST00000397537 MAP4K2Q12851 820 aa7.6□□□□□ -1.19
SMCO1-201ENST00000397537 SMAD2Q15796 467 aaKnown RBP7.6□□□□□ -1.19
SMCO1-201ENST00000397537 STYK1Q6J9G0 422 aa7.6□□□□□ -1.19
SMCO1-201ENST00000397537 SIAH1Q8IUQ4 282 aa7.6□□□□□ -1.19
SMCO1-201ENST00000397537 TRIM59Q8IWR1 403 aa7.6□□□□□ -1.19
SMCO1-201ENST00000397537 GALNT15Q8N3T1 639 aa7.6□□□□□ -1.19
SMCO1-201ENST00000397537 TMEM145Q8NBT3 493 aa7.6□□□□□ -1.19
SMCO1-201ENST00000397537 CHST14Q8NCH0 376 aa7.6□□□□□ -1.19
SMCO1-201ENST00000397537 ZIC5Q96T25 663 aa7.6□□□□□ -1.19
SMCO1-201ENST00000397537 ADAM19Q9H013 955 aa7.6□□□□□ -1.19
SMCO1-201ENST00000397537 PDCL3Q9H2J4 239 aa7.6□□□□□ -1.19
SMCO1-201ENST00000397537 DCP1AQ9NPI6 582 aaPredicted RBP7.6□□□□□ -1.19
SMCO1-201ENST00000397537 TRMT1Q9NXH9 659 aaKnown RBP7.6□□□□□ -1.19
SMCO1-201ENST00000397537 PLA2G2EQ9NZK7 142 aa7.6□□□□□ -1.19
SMCO1-201ENST00000397537 LRFN1Q9P244 771 aa7.6□□□□□ -1.19
SMCO1-201ENST00000397537 RABL2AQ9UBK7 228 aaPredicted RBP7.6□□□□□ -1.19
SMCO1-201ENST00000397537 ZHX1Q9UKY1 873 aaPredicted RBP7.6□□□□□ -1.19
SMCO1-201ENST00000397537 ZNF711Q9Y462 761 aa7.6□□□□□ -1.19
SMCO1-201ENST00000397537 PCDHGB5Q9Y5G0 923 aa7.6□□□□□ -1.19
SMCO1-201ENST00000397537 SPATA31A6Q5VVP1 1343 aa7.6□□□□□ -1.19
SMCO1-201ENST00000397537 POM121BA6NF01 834 aa7.59□□□□□ -1.19
SMCO1-201ENST00000397537 FIGNL2A6NMB9 653 aa7.59□□□□□ -1.19
SMCO1-201ENST00000397537 GOLGA6L22H0YM25 854 aa7.59□□□□□ -1.19
SMCO1-201ENST00000397537 MPHOSPH10O00566 681 aaKnown RBP7.59□□□□□ -1.19
SMCO1-201ENST00000397537 ACKR2O00590 384 aa7.59□□□□□ -1.19
SMCO1-201ENST00000397537 SOAT2O75908 522 aa7.59□□□□□ -1.19
SMCO1-201ENST00000397537 B3GALT4O96024 378 aa7.59□□□□□ -1.19
SMCO1-201ENST00000397537 GSNP06396 782 aa7.59□□□□□ -1.19
SMCO1-201ENST00000397537 CKMP06732 381 aa7.59□□□□□ -1.19
SMCO1-201ENST00000397537 HOXD13P35453 343 aa7.59□□□□□ -1.19
SMCO1-201ENST00000397537 PTGIRP43119 386 aa7.59□□□□□ -1.19
SMCO1-201ENST00000397537 ALDH9A1P49189 494 aa7.59□□□□□ -1.19
SMCO1-201ENST00000397537 LRP8Q14114 963 aa7.59□□□□□ -1.19
SMCO1-201ENST00000397537 POLD3Q15054 466 aaPredicted RBP7.59□□□□□ -1.19
SMCO1-201ENST00000397537 PDCD1Q15116 288 aa7.59□□□□□ -1.19
SMCO1-201ENST00000397537 SURF1Q15526 300 aa7.59□□□□□ -1.19
SMCO1-201ENST00000397537 MPEG1Q2M385 716 aa7.59□□□□□ -1.19
SMCO1-201ENST00000397537 ARL13BQ3SXY8 428 aa7.59□□□□□ -1.19
SMCO1-201ENST00000397537 ZACNQ401N2 412 aa7.59□□□□□ -1.19
SMCO1-201ENST00000397537 GNASQ5JWF2 1037 aa7.59□□□□□ -1.19
SMCO1-201ENST00000397537 TMEM201Q5SNT2 666 aa7.59□□□□□ -1.19
SMCO1-201ENST00000397537 MAP1SQ66K74 1059 aaPredicted RBP7.59□□□□□ -1.19
SMCO1-201ENST00000397537 KCNT2Q6UVM3 1135 aa7.59□□□□□ -1.19
SMCO1-201ENST00000397537 ADAT2Q7Z6V5 191 aaKnown RBP7.59□□□□□ -1.19
SMCO1-201ENST00000397537 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.59□□□□□ -1.19
SMCO1-201ENST00000397537 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.59□□□□□ -1.19
SMCO1-201ENST00000397537 BRF1Q92994 677 aa7.59□□□□□ -1.19
SMCO1-201ENST00000397537 PLPPR2Q96GM1 343 aa7.59□□□□□ -1.19
SMCO1-201ENST00000397537 TRERF1Q96PN7 1200 aa7.59□□□□□ -1.19
SMCO1-201ENST00000397537 ARHGAP39Q9C0H5 1083 aa7.59□□□□□ -1.19
SMCO1-201ENST00000397537 BTBD1Q9H0C5 482 aa7.59□□□□□ -1.19
SMCO1-201ENST00000397537 PGPEP1Q9NXJ5 209 aa7.59□□□□□ -1.19
SMCO1-201ENST00000397537 EIF2B4Q9UI10 523 aaKnown RBP7.59□□□□□ -1.19
SMCO1-201ENST00000397537 TUBD1Q9UJT1 453 aa7.59□□□□□ -1.19
SMCO1-201ENST00000397537 GTF3C4Q9UKN8 822 aa7.59□□□□□ -1.19
SMCO1-201ENST00000397537 C19orf53Q9UNZ5 99 aaPredicted RBP7.59□□□□□ -1.19
SMCO1-201ENST00000397537 EMC9Q9Y3B6 208 aa7.59□□□□□ -1.19
SMCO1-201ENST00000397537 ATP6V0A2Q9Y487 856 aa7.59□□□□□ -1.19
SMCO1-201ENST00000397537 SNX13Q9Y5W8 968 aa7.59□□□□□ -1.19
SMCO1-201ENST00000397537 IQGAP1P46940 1657 aa7.59□□□□□ -1.19
SMCO1-201ENST00000397537 SENP3-EIF4A1A0A087X0R7 540 aa7.59□□□□□ -1.19
SMCO1-201ENST00000397537 PTPDC1A2A3K4 754 aa7.59□□□□□ -1.19
SMCO1-201ENST00000397537 AQP7O14520 342 aa7.59□□□□□ -1.19
SMCO1-201ENST00000397537 FSCN2O14926 492 aa7.59□□□□□ -1.19
SMCO1-201ENST00000397537 PSAPP07602 524 aa7.59□□□□□ -1.19
SMCO1-201ENST00000397537 MYF5P13349 255 aa7.59□□□□□ -1.19
SMCO1-201ENST00000397537 SSR1P43307 286 aaKnown RBP7.59□□□□□ -1.19
SMCO1-201ENST00000397537 RGS3P49796 1198 aa7.59□□□□□ -1.19
SMCO1-201ENST00000397537 RCAN1P53805 252 aa7.59□□□□□ -1.19
SMCO1-201ENST00000397537 PRSS53Q2L4Q9 553 aa7.59□□□□□ -1.19
SMCO1-201ENST00000397537 ZNF423Q2M1K9 1284 aa7.59□□□□□ -1.19
SMCO1-201ENST00000397537 PGS1Q32NB8 556 aa7.59□□□□□ -1.19
SMCO1-201ENST00000397537 TMEM177Q53S58 311 aa7.59□□□□□ -1.19
SMCO1-201ENST00000397537 FBXO47Q5MNV8 452 aa7.59□□□□□ -1.19
SMCO1-201ENST00000397537 DCAF15Q66K64 600 aa7.59□□□□□ -1.19
SMCO1-201ENST00000397537 SCARA3Q6AZY7 606 aa7.59□□□□□ -1.19
SMCO1-201ENST00000397537 LBX2Q6XYB7 198 aa7.59□□□□□ -1.19
SMCO1-201ENST00000397537 KRT74Q7RTS7 529 aa7.59□□□□□ -1.19
SMCO1-201ENST00000397537 RNF152Q8N8N0 203 aa7.59□□□□□ -1.19
SMCO1-201ENST00000397537 OR10H5Q8NGA6 315 aa7.59□□□□□ -1.19
SMCO1-201ENST00000397537 BRI3BPQ8WY22 251 aa7.59□□□□□ -1.19
SMCO1-201ENST00000397537 HERVK_113Q902F9 699 aa7.59□□□□□ -1.19
SMCO1-201ENST00000397537 DHRS1Q96LJ7 313 aa7.59□□□□□ -1.19
SMCO1-201ENST00000397537 SLC2A13Q96QE2 648 aa7.59□□□□□ -1.19
SMCO1-201ENST00000397537 C22orf23Q9BZE7 217 aa7.59□□□□□ -1.19
SMCO1-201ENST00000397537 SIL1Q9H173 461 aa7.59□□□□□ -1.19
SMCO1-201ENST00000397537 CLEC4MQ9H2X3 399 aaPredicted RBP7.59□□□□□ -1.19
SMCO1-201ENST00000397537 NOL6Q9H6R4 1146 aaKnown RBP7.59□□□□□ -1.19
SMCO1-201ENST00000397537 CACNA2D2Q9NY47 1150 aa7.59□□□□□ -1.19
SMCO1-201ENST00000397537 ORC3Q9UBD5 711 aaPredicted RBP7.59□□□□□ -1.19
SMCO1-201ENST00000397537 PHLPP1O60346 1717 aa7.58□□□□□ -1.2
SMCO1-201ENST00000397537 PES1O00541 588 aaKnown RBP7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms