RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 CBWD5Q5RIA9 395 aa11.34□□□□□ -0.59
CPSF1P1-201ENST00000397477 WDR93Q6P2C0 686 aa11.34□□□□□ -0.59
CPSF1P1-201ENST00000397477 NLRX1Q86UT6 975 aa11.34□□□□□ -0.59
CPSF1P1-201ENST00000397477 GMCL1P1Q8NEA9 526 aa11.34□□□□□ -0.59
CPSF1P1-201ENST00000397477 ZNF668Q96K58 619 aaPredicted RBP11.34□□□□□ -0.59
CPSF1P1-201ENST00000397477 POP1Q99575 1024 aaKnown RBP11.34□□□□□ -0.59
CPSF1P1-201ENST00000397477 INTS2Q9H0H0 1204 aaKnown RBP11.34□□□□□ -0.59
CPSF1P1-201ENST00000397477 TSKSQ9UJT2 592 aa11.34□□□□□ -0.59
CPSF1P1-201ENST00000397477 ASTN1O14525 1302 aa11.34□□□□□ -0.59
CPSF1P1-201ENST00000397477 OPLAHO14841 1288 aa11.34□□□□□ -0.59
CPSF1P1-201ENST00000397477 EPHB4P54760 987 aa11.34□□□□□ -0.59
CPSF1P1-201ENST00000397477 CDK17Q00537 523 aa11.34□□□□□ -0.59
CPSF1P1-201ENST00000397477 STYK1Q6J9G0 422 aa11.34□□□□□ -0.59
CPSF1P1-201ENST00000397477 RBM46Q8TBY0 533 aaKnown RBP11.34□□□□□ -0.59
CPSF1P1-201ENST00000397477 TCHPQ9BT92 498 aa11.34□□□□□ -0.59
CPSF1P1-201ENST00000397477 AGPAT3Q9NRZ7 376 aa11.34□□□□□ -0.59
CPSF1P1-201ENST00000397477 WRAP73Q9P2S5 460 aaPredicted RBP11.34□□□□□ -0.59
CPSF1P1-201ENST00000397477 PTPN22Q9Y2R2 807 aa11.34□□□□□ -0.59
CPSF1P1-201ENST00000397477 TBX3O15119 743 aa11.34□□□□□ -0.59
CPSF1P1-201ENST00000397477 ONECUT3O60422 494 aaPredicted RBP11.34□□□□□ -0.59
CPSF1P1-201ENST00000397477 ZBED4O75132 1171 aa11.34□□□□□ -0.59
CPSF1P1-201ENST00000397477 FERP16591 822 aa11.34□□□□□ -0.59
CPSF1P1-201ENST00000397477 VPS41P49754 854 aa11.34□□□□□ -0.59
CPSF1P1-201ENST00000397477 DLG4P78352 724 aa11.34□□□□□ -0.59
CPSF1P1-201ENST00000397477 RNF187Q5TA31 235 aaPredicted RBP11.34□□□□□ -0.59
CPSF1P1-201ENST00000397477 RNF10Q8N5U6 811 aaKnown RBP11.34□□□□□ -0.59
CPSF1P1-201ENST00000397477 BCAS4Q8TDM0 211 aa11.34□□□□□ -0.59
CPSF1P1-201ENST00000397477 POMGNT1Q8WZA1 660 aa11.34□□□□□ -0.59
CPSF1P1-201ENST00000397477 ARL8AQ96BM9 186 aa11.34□□□□□ -0.59
CPSF1P1-201ENST00000397477 CEP170P1Q96L14 293 aa11.34□□□□□ -0.59
CPSF1P1-201ENST00000397477 VAV3Q9UKW4 847 aa11.34□□□□□ -0.59
CPSF1P1-201ENST00000397477 MYH10P35580 1976 aa11.33□□□□□ -0.6
CPSF1P1-201ENST00000397477 TRIM66O15016 1216 aa11.33□□□□□ -0.6
CPSF1P1-201ENST00000397477 ITGA4P13612 1032 aa11.33□□□□□ -0.6
CPSF1P1-201ENST00000397477 IBSPP21815 317 aaPredicted RBP11.33□□□□□ -0.6
CPSF1P1-201ENST00000397477 SPIRE1Q08AE8 756 aa11.33□□□□□ -0.6
CPSF1P1-201ENST00000397477 C2CD6Q53TS8 623 aa11.33□□□□□ -0.6
CPSF1P1-201ENST00000397477 CYFIP1Q7L576 1253 aa11.33□□□□□ -0.6
CPSF1P1-201ENST00000397477 TSEN2Q8NCE0 465 aaKnown RBP11.33□□□□□ -0.6
CPSF1P1-201ENST00000397477 MYO3BQ8WXR4 1341 aa11.33□□□□□ -0.6
CPSF1P1-201ENST00000397477 H0YHG0 523 aa11.33□□□□□ -0.6
CPSF1P1-201ENST00000397477 FOXN3O00409 490 aaPredicted RBP11.33□□□□□ -0.6
CPSF1P1-201ENST00000397477 TGFB1I1O43294 461 aa11.33□□□□□ -0.6
CPSF1P1-201ENST00000397477 KIF4AO95239 1232 aa11.33□□□□□ -0.6
CPSF1P1-201ENST00000397477 CCDC172P0C7W6 258 aa11.33□□□□□ -0.6
CPSF1P1-201ENST00000397477 BCRP11274 1271 aa11.33□□□□□ -0.6
CPSF1P1-201ENST00000397477 CAP2P40123 477 aa11.33□□□□□ -0.6
CPSF1P1-201ENST00000397477 RPS6P62753 249 aaKnown RBP11.33□□□□□ -0.6
CPSF1P1-201ENST00000397477 HDLBPQ00341 1268 aaKnown RBP11.33□□□□□ -0.6
CPSF1P1-201ENST00000397477 CXCL9Q07325 125 aa11.33□□□□□ -0.6
CPSF1P1-201ENST00000397477 MCTP2Q6DN12 878 aa11.33□□□□□ -0.6
CPSF1P1-201ENST00000397477 CIAPIN1Q6FI81 312 aa11.33□□□□□ -0.6
CPSF1P1-201ENST00000397477 KAT5Q92993 513 aa11.33□□□□□ -0.6
CPSF1P1-201ENST00000397477 ZKSCAN4Q969J2 545 aaPredicted RBP11.33□□□□□ -0.6
CPSF1P1-201ENST00000397477 GANQ9H2C0 597 aa11.33□□□□□ -0.6
CPSF1P1-201ENST00000397477 PLCB1Q9NQ66 1216 aa11.33□□□□□ -0.6
CPSF1P1-201ENST00000397477 PCDHA2Q9Y5H9 948 aa11.33□□□□□ -0.6
CPSF1P1-201ENST00000397477 PLIN4Q96Q06 1357 aa11.33□□□□□ -0.6
CPSF1P1-201ENST00000397477 CTNNA1P35221 906 aaKnown RBP11.33□□□□□ -0.6
CPSF1P1-201ENST00000397477 HOXD13P35453 343 aa11.33□□□□□ -0.6
CPSF1P1-201ENST00000397477 NNTQ13423 1086 aa11.33□□□□□ -0.6
CPSF1P1-201ENST00000397477 ZNF772Q68DY9 489 aaPredicted RBP11.33□□□□□ -0.6
CPSF1P1-201ENST00000397477 PRPF38AQ8NAV1 312 aaKnown RBP11.33□□□□□ -0.6
CPSF1P1-201ENST00000397477 ZSWIM2Q8NEG5 633 aa11.33□□□□□ -0.6
CPSF1P1-201ENST00000397477 SLC20A1Q8WUM9 679 aa11.33□□□□□ -0.6
CPSF1P1-201ENST00000397477 PPANQ9NQ55 473 aaKnown RBP11.33□□□□□ -0.6
CPSF1P1-201ENST00000397477 SEPT9Q9UHD8 586 aaPredicted RBP11.33□□□□□ -0.6
CPSF1P1-201ENST00000397477 NOC2LQ9Y3T9 749 aaKnown RBP11.33□□□□□ -0.6
CPSF1P1-201ENST00000397477 SCN7AQ01118 1682 aa11.33□□□□□ -0.6
CPSF1P1-201ENST00000397477 CYP3A7-CYP3A51PA0A087WV96 503 aa11.32□□□□□ -0.6
CPSF1P1-201ENST00000397477 PGRMC1O00264 195 aaKnown RBP11.32□□□□□ -0.6
CPSF1P1-201ENST00000397477 HNRNPDLO14979 420 aaKnown RBP11.32□□□□□ -0.6
CPSF1P1-201ENST00000397477 DAPK3O43293 454 aa11.32□□□□□ -0.6
CPSF1P1-201ENST00000397477 ITGB5P18084 799 aa11.32□□□□□ -0.6
CPSF1P1-201ENST00000397477 CYP3A7P24462 503 aa11.32□□□□□ -0.6
CPSF1P1-201ENST00000397477 HMGB2P26583 209 aaKnown RBP11.32□□□□□ -0.6
CPSF1P1-201ENST00000397477 MXI1P50539 228 aa11.32□□□□□ -0.6
CPSF1P1-201ENST00000397477 SMTNP53814 917 aa11.32□□□□□ -0.6
CPSF1P1-201ENST00000397477 EPHA7Q15375 998 aa11.32□□□□□ -0.6
CPSF1P1-201ENST00000397477 MUM1L1Q5H9M0 696 aa11.32□□□□□ -0.6
CPSF1P1-201ENST00000397477 RNF207Q6ZRF8 634 aa11.32□□□□□ -0.6
CPSF1P1-201ENST00000397477 ZNF720Q7Z2F6 126 aa11.32□□□□□ -0.6
CPSF1P1-201ENST00000397477 HAUS6Q7Z4H7 955 aa11.32□□□□□ -0.6
CPSF1P1-201ENST00000397477 SLC35G2Q8TBE7 412 aa11.32□□□□□ -0.6
CPSF1P1-201ENST00000397477 TRIM51Q9BSJ1 452 aa11.32□□□□□ -0.6
CPSF1P1-201ENST00000397477 POLR3CQ9BUI4 534 aaPredicted RBP11.32□□□□□ -0.6
CPSF1P1-201ENST00000397477 CAPS2Q9BXY5 557 aa11.32□□□□□ -0.6
CPSF1P1-201ENST00000397477 EDEM3Q9BZQ6 932 aa11.32□□□□□ -0.6
CPSF1P1-201ENST00000397477 PICK1Q9NRD5 415 aa11.32□□□□□ -0.6
CPSF1P1-201ENST00000397477 TAS2R14Q9NYV8 317 aa11.32□□□□□ -0.6
CPSF1P1-201ENST00000397477 BZW2Q9Y6E2 419 aaKnown RBP11.32□□□□□ -0.6
CPSF1P1-201ENST00000397477 ZHX2Q9Y6X8 837 aa11.32□□□□□ -0.6
CPSF1P1-201ENST00000397477 DDX3XO00571 662 aaKnown RBP eCLIP11.32□□□□□ -0.6
CPSF1P1-201ENST00000397477 WNT10BO00744 389 aa11.32□□□□□ -0.6
CPSF1P1-201ENST00000397477 NDUFAB1O14561 156 aa11.32□□□□□ -0.6
CPSF1P1-201ENST00000397477 ERLIN2O94905 339 aa11.32□□□□□ -0.6
CPSF1P1-201ENST00000397477 TNNI1P19237 187 aa11.32□□□□□ -0.6
CPSF1P1-201ENST00000397477 SOX5P35711 763 aa11.32□□□□□ -0.6
CPSF1P1-201ENST00000397477 NOVP48745 357 aa11.32□□□□□ -0.6
CPSF1P1-201ENST00000397477 HMGCS2P54868 508 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms