RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 ZCWPW2Q504Y3 356 aa30.36■■■□□ 2.45
CPNE1-203ENST00000397442 ZC2HC1CQ53FD0 456 aaPredicted RBP30.36■■■□□ 2.45
CPNE1-203ENST00000397442 TRAPPC12Q8WVT3 735 aa30.36■■■□□ 2.45
CPNE1-203ENST00000397442 KAT2BQ92831 832 aa30.36■■■□□ 2.45
CPNE1-203ENST00000397442 POLR3FQ9H1D9 316 aaPredicted RBP30.36■■■□□ 2.45
CPNE1-203ENST00000397442 UPF3AQ9H1J1 476 aaKnown RBP30.36■■■□□ 2.45
CPNE1-203ENST00000397442 C17orf75Q9HAS0 396 aa30.36■■■□□ 2.45
CPNE1-203ENST00000397442 BICDL2A1A5D9 508 aa30.35■■■□□ 2.45
CPNE1-203ENST00000397442 EIF3DO15371 548 aaKnown RBP eCLIP30.35■■■□□ 2.45
CPNE1-203ENST00000397442 PRPF6O94906 941 aaKnown RBP30.35■■■□□ 2.45
CPNE1-203ENST00000397442 PEX3P56589 373 aa30.35■■■□□ 2.45
CPNE1-203ENST00000397442 NELFCDQ8IXH7 590 aa30.35■■■□□ 2.45
CPNE1-203ENST00000397442 TMEM143Q96AN5 459 aa30.35■■■□□ 2.45
CPNE1-203ENST00000397442 MYADML2A6NDP7 307 aa30.34■■■□□ 2.45
CPNE1-203ENST00000397442 KIF20AO95235 890 aa30.34■■■□□ 2.45
CPNE1-203ENST00000397442 ARL2P36404 184 aa30.34■■■□□ 2.45
CPNE1-203ENST00000397442 TPM4P67936 248 aa30.34■■■□□ 2.45
CPNE1-203ENST00000397442 NKX3-2P78367 333 aa30.34■■■□□ 2.45
CPNE1-203ENST00000397442 KCNA1Q09470 495 aa30.34■■■□□ 2.45
CPNE1-203ENST00000397442 ZNF484Q5JVG2 852 aa30.34■■■□□ 2.45
CPNE1-203ENST00000397442 CDKAL1Q5VV42 579 aa30.34■■■□□ 2.45
CPNE1-203ENST00000397442 FOXR2Q6PJQ5 311 aa30.34■■■□□ 2.45
CPNE1-203ENST00000397442 NTPCRQ9BSD7 190 aaKnown RBP30.34■■■□□ 2.45
CPNE1-203ENST00000397442 NPTX2P47972 431 aa30.33■■■□□ 2.45
CPNE1-203ENST00000397442 NCKAP1LP55160 1127 aa30.33■■■□□ 2.45
CPNE1-203ENST00000397442 SARM1Q6SZW1 724 aa30.33■■■□□ 2.45
CPNE1-203ENST00000397442 ST6GALNAC4Q9H4F1 302 aa30.33■■■□□ 2.45
CPNE1-203ENST00000397442 TRIM17Q9Y577 477 aa30.33■■■□□ 2.45
CPNE1-203ENST00000397442 DEKP35659 375 aaKnown RBP30.33■■■□□ 2.45
CPNE1-203ENST00000397442 PLCB2Q00722 1185 aa30.33■■■□□ 2.45
CPNE1-203ENST00000397442 LRRC63Q05C16 580 aa30.33■■■□□ 2.45
CPNE1-203ENST00000397442 MKRN4PQ13434 485 aaPredicted RBP30.33■■■□□ 2.45
CPNE1-203ENST00000397442 DRP2Q13474 957 aa30.33■■■□□ 2.45
CPNE1-203ENST00000397442 KNOP1Q1ED39 458 aaKnown RBP30.33■■■□□ 2.45
CPNE1-203ENST00000397442 BRDTQ58F21 947 aaPredicted RBP30.33■■■□□ 2.45
CPNE1-203ENST00000397442 HSP90AA4PQ58FG1 418 aa30.33■■■□□ 2.45
CPNE1-203ENST00000397442 SPIRE2Q8WWL2 714 aa30.33■■■□□ 2.45
CPNE1-203ENST00000397442 COL1A2P08123 1366 aa30.32■■■□□ 2.44
CPNE1-203ENST00000397442 K7ENM7 598 aa30.32■■■□□ 2.44
CPNE1-203ENST00000397442 C22orf31O95567 290 aa30.32■■■□□ 2.44
CPNE1-203ENST00000397442 RARBP10826 455 aa30.32■■■□□ 2.44
CPNE1-203ENST00000397442 DMP1Q13316 513 aaPredicted RBP30.32■■■□□ 2.44
CPNE1-203ENST00000397442 KSR1Q8IVT5 923 aa30.32■■■□□ 2.44
CPNE1-203ENST00000397442 SLAIN1Q8ND83 568 aa30.32■■■□□ 2.44
CPNE1-203ENST00000397442 ASAP3Q8TDY4 903 aa30.32■■■□□ 2.44
CPNE1-203ENST00000397442 PTCH2Q9Y6C5 1203 aa30.32■■■□□ 2.44
CPNE1-203ENST00000397442 ZMYM2Q9UBW7 1377 aa30.32■■■□□ 2.44
CPNE1-203ENST00000397442 PGK1P00558 417 aa30.31■■■□□ 2.44
CPNE1-203ENST00000397442 C6orf222P0C671 652 aaPredicted RBP30.31■■■□□ 2.44
CPNE1-203ENST00000397442 IRF2BP1Q8IU81 584 aa30.31■■■□□ 2.44
CPNE1-203ENST00000397442 EXOC8Q8IYI6 725 aa30.31■■■□□ 2.44
CPNE1-203ENST00000397442 PCDHB13Q9Y5F0 798 aa30.31■■■□□ 2.44
CPNE1-203ENST00000397442 UBE4BO95155 1302 aa30.31■■■□□ 2.44
CPNE1-203ENST00000397442 HAS3O00219 553 aa30.3■■■□□ 2.44
CPNE1-203ENST00000397442 SLC16A4O15374 487 aa30.3■■■□□ 2.44
CPNE1-203ENST00000397442 ADAMTS4O75173 837 aa30.3■■■□□ 2.44
CPNE1-203ENST00000397442 MYL3P08590 195 aa30.3■■■□□ 2.44
CPNE1-203ENST00000397442 GLRA2P23416 452 aa30.3■■■□□ 2.44
CPNE1-203ENST00000397442 PURAQ00577 322 aaKnown RBP30.3■■■□□ 2.44
CPNE1-203ENST00000397442 TPD52L1Q16890 204 aaPredicted RBP30.3■■■□□ 2.44
CPNE1-203ENST00000397442 STXBP4Q6ZWJ1 553 aa30.3■■■□□ 2.44
CPNE1-203ENST00000397442 HAUS6Q7Z4H7 955 aa30.3■■■□□ 2.44
CPNE1-203ENST00000397442 CSGALNACT2Q8N6G5 542 aa30.3■■■□□ 2.44
CPNE1-203ENST00000397442 TMEM161BQ8NDZ6 487 aa30.3■■■□□ 2.44
CPNE1-203ENST00000397442 ZBTB10Q96DT7 871 aa30.3■■■□□ 2.44
CPNE1-203ENST00000397442 ADGRA3Q8IWK6 1321 aa30.3■■■□□ 2.44
CPNE1-203ENST00000397442 GAS2O43903 313 aaKnown RBP30.3■■■□□ 2.44
CPNE1-203ENST00000397442 INHAP05111 366 aa30.3■■■□□ 2.44
CPNE1-203ENST00000397442 GTF2BQ00403 316 aa30.3■■■□□ 2.44
CPNE1-203ENST00000397442 KIFC3Q9BVG8 833 aa30.3■■■□□ 2.44
CPNE1-203ENST00000397442 SRRTQ9BXP5 876 aaKnown RBP30.3■■■□□ 2.44
CPNE1-203ENST00000397442 CCDC169A6NNP5 214 aa30.29■■■□□ 2.44
CPNE1-203ENST00000397442 ADCY5O95622 1261 aa30.29■■■□□ 2.44
CPNE1-203ENST00000397442 GRK4P32298 578 aa30.29■■■□□ 2.44
CPNE1-203ENST00000397442 IGBP1P78318 339 aa30.29■■■□□ 2.44
CPNE1-203ENST00000397442 ALCAMQ13740 583 aa30.29■■■□□ 2.44
CPNE1-203ENST00000397442 KIAA0753Q2KHM9 967 aa30.29■■■□□ 2.44
CPNE1-203ENST00000397442 IER5Q5VY09 327 aa30.29■■■□□ 2.44
CPNE1-203ENST00000397442 LRRC71Q8N4P6 559 aa30.29■■■□□ 2.44
CPNE1-203ENST00000397442 SLC17A8Q8NDX2 589 aa30.29■■■□□ 2.44
CPNE1-203ENST00000397442 IKZF4Q9H2S9 585 aa30.29■■■□□ 2.44
CPNE1-203ENST00000397442 SUGCTQ9HAC7 445 aa30.29■■■□□ 2.44
CPNE1-203ENST00000397442 KMT5AQ9NQR1 393 aa30.29■■■□□ 2.44
CPNE1-203ENST00000397442 TRAF3IP3Q9Y228 551 aa30.29■■■□□ 2.44
CPNE1-203ENST00000397442 TGFB1I1O43294 461 aa30.28■■■□□ 2.44
CPNE1-203ENST00000397442 SMTNP53814 917 aa30.28■■■□□ 2.44
CPNE1-203ENST00000397442 PPFIA1Q13136 1202 aa30.28■■■□□ 2.44
CPNE1-203ENST00000397442 MFSD10Q14728 455 aa30.28■■■□□ 2.44
CPNE1-203ENST00000397442 GNASQ5JWF2 1037 aa30.28■■■□□ 2.44
CPNE1-203ENST00000397442 MARCH8Q5T0T0 291 aa30.28■■■□□ 2.44
CPNE1-203ENST00000397442 LRRC55Q6ZSA7 311 aa30.28■■■□□ 2.44
CPNE1-203ENST00000397442 IFT74Q96LB3 600 aa30.28■■■□□ 2.44
CPNE1-203ENST00000397442 JPH2Q9BR39 696 aaPredicted RBP30.28■■■□□ 2.44
CPNE1-203ENST00000397442 THAP9Q9H5L6 903 aa30.28■■■□□ 2.44
CPNE1-203ENST00000397442 XPNPEP3Q9NQH7 507 aa30.28■■■□□ 2.44
CPNE1-203ENST00000397442 EVPLQ92817 2033 aa30.28■■■□□ 2.44
CPNE1-203ENST00000397442 PDXKO00764 312 aa30.27■■■□□ 2.44
CPNE1-203ENST00000397442 KLRC1P26715 233 aa30.27■■■□□ 2.44
CPNE1-203ENST00000397442 PSEN2P49810 448 aa30.27■■■□□ 2.44
CPNE1-203ENST00000397442 FANCCQ00597 558 aa30.27■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms