RNA–Protein interactions for RNA: ENST00000397428.7

SYNE4-203, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 382 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-203ENST00000397428 CLCN3P51790 818 aa13.5□□□□□ -0.25
SYNE4-203ENST00000397428 KRT17Q04695 432 aa13.5□□□□□ -0.25
SYNE4-203ENST00000397428 SIGLEC14Q08ET2 396 aa13.5□□□□□ -0.25
SYNE4-203ENST00000397428 APOBRQ0VD83 1088 aa13.5□□□□□ -0.25
SYNE4-203ENST00000397428 TARBP2Q15633 366 aaKnown RBP13.5□□□□□ -0.25
SYNE4-203ENST00000397428 NTRK3Q16288 839 aa13.5□□□□□ -0.25
SYNE4-203ENST00000397428 TRMT1LQ7Z2T5 733 aaKnown RBP13.5□□□□□ -0.25
SYNE4-203ENST00000397428 ZNF598Q86UK7 904 aaKnown RBP13.5□□□□□ -0.25
SYNE4-203ENST00000397428 ASIC4Q96FT7 647 aa13.5□□□□□ -0.25
SYNE4-203ENST00000397428 FAM167AQ96KS9 214 aa13.5□□□□□ -0.25
SYNE4-203ENST00000397428 RIT2Q99578 217 aa13.5□□□□□ -0.25
SYNE4-203ENST00000397428 TCF25Q9BQ70 676 aa13.5□□□□□ -0.25
SYNE4-203ENST00000397428 MSH4O15457 936 aa13.49□□□□□ -0.25
SYNE4-203ENST00000397428 STBD1O95210 358 aa13.49□□□□□ -0.25
SYNE4-203ENST00000397428 DARSP14868 501 aaKnown RBP13.49□□□□□ -0.25
SYNE4-203ENST00000397428 CPA1P15085 419 aa13.49□□□□□ -0.25
SYNE4-203ENST00000397428 TECP42680 631 aa13.49□□□□□ -0.25
SYNE4-203ENST00000397428 METAP2P50579 478 aaKnown RBP eCLIP13.49□□□□□ -0.25
SYNE4-203ENST00000397428 EVCP57679 992 aa13.49□□□□□ -0.25
SYNE4-203ENST00000397428 CLLU1OSQ5K130 101 aa13.49□□□□□ -0.25
SYNE4-203ENST00000397428 Q6ZUG5 572 aa13.49□□□□□ -0.25
SYNE4-203ENST00000397428 SKAP1Q86WV1 359 aa13.49□□□□□ -0.25
SYNE4-203ENST00000397428 SLC5A5Q92911 643 aa13.49□□□□□ -0.25
SYNE4-203ENST00000397428 ZNF558Q96NG5 402 aa13.49□□□□□ -0.25
SYNE4-203ENST00000397428 PHOX2BQ99453 314 aa13.49□□□□□ -0.25
SYNE4-203ENST00000397428 NIFKQ9BYG3 293 aaKnown RBP13.49□□□□□ -0.25
SYNE4-203ENST00000397428 AGXT2Q9BYV1 514 aa13.49□□□□□ -0.25
SYNE4-203ENST00000397428 DISC1Q9NRI5 854 aa13.49□□□□□ -0.25
SYNE4-203ENST00000397428 SAMM50Q9Y512 469 aa13.49□□□□□ -0.25
SYNE4-203ENST00000397428 WDR81Q562E7 1941 aa13.49□□□□□ -0.25
SYNE4-203ENST00000397428 NID2Q14112 1375 aa13.48□□□□□ -0.25
SYNE4-203ENST00000397428 WDR64B1ANS9 1081 aa13.48□□□□□ -0.25
SYNE4-203ENST00000397428 OATP04181 439 aa13.48□□□□□ -0.25
SYNE4-203ENST00000397428 SRGAP2BP0DMP2 458 aa13.48□□□□□ -0.25
SYNE4-203ENST00000397428 SFNP31947 248 aa13.48□□□□□ -0.25
SYNE4-203ENST00000397428 PPM1AP35813 382 aa13.48□□□□□ -0.25
SYNE4-203ENST00000397428 GPC3P51654 580 aa13.48□□□□□ -0.25
SYNE4-203ENST00000397428 PTPN5P54829 565 aa13.48□□□□□ -0.25
SYNE4-203ENST00000397428 CDC42EP1Q00587 391 aa13.48□□□□□ -0.25
SYNE4-203ENST00000397428 TCF15Q12870 199 aa13.48□□□□□ -0.25
SYNE4-203ENST00000397428 PTPN21Q16825 1174 aa13.48□□□□□ -0.25
SYNE4-203ENST00000397428 PLPP4Q5VZY2 271 aa13.48□□□□□ -0.25
SYNE4-203ENST00000397428 TMC7Q7Z402 723 aa13.48□□□□□ -0.25
SYNE4-203ENST00000397428 SLC39A11Q8N1S5 342 aa13.48□□□□□ -0.25
SYNE4-203ENST00000397428 LRRC71Q8N4P6 559 aa13.48□□□□□ -0.25
SYNE4-203ENST00000397428 BICD2Q8TD16 824 aa13.48□□□□□ -0.25
SYNE4-203ENST00000397428 BRF1Q92994 677 aa13.48□□□□□ -0.25
SYNE4-203ENST00000397428 CEP89Q96ST8 783 aa13.48□□□□□ -0.25
SYNE4-203ENST00000397428 MAP7D2Q96T17 732 aa13.48□□□□□ -0.25
SYNE4-203ENST00000397428 TRAIPQ9BWF2 469 aa13.48□□□□□ -0.25
SYNE4-203ENST00000397428 AKT3Q9Y243 479 aa13.48□□□□□ -0.25
SYNE4-203ENST00000397428 IGKV6-21A0A0C4DH24 114 aa13.47□□□□□ -0.25
SYNE4-203ENST00000397428 C2orf71A6NGG8 1288 aa13.47□□□□□ -0.25
SYNE4-203ENST00000397428 AVPR2P30518 371 aa13.47□□□□□ -0.25
SYNE4-203ENST00000397428 HSPA4P34932 840 aa13.47□□□□□ -0.25
SYNE4-203ENST00000397428 PBX3P40426 434 aa13.47□□□□□ -0.25
SYNE4-203ENST00000397428 FGD1P98174 961 aa13.47□□□□□ -0.25
SYNE4-203ENST00000397428 UGCGQ16739 394 aa13.47□□□□□ -0.25
SYNE4-203ENST00000397428 B3GNT9Q6UX72 402 aa13.47□□□□□ -0.25
SYNE4-203ENST00000397428 SUGP1Q8IWZ8 645 aaKnown RBP13.47□□□□□ -0.25
SYNE4-203ENST00000397428 ABI1Q8IZP0 508 aa13.47□□□□□ -0.25
SYNE4-203ENST00000397428 LRRC43Q8N309 656 aa13.47□□□□□ -0.25
SYNE4-203ENST00000397428 PHKBQ93100 1093 aa13.47□□□□□ -0.25
SYNE4-203ENST00000397428 CCDC136Q96JN2 1154 aa13.47□□□□□ -0.25
SYNE4-203ENST00000397428 RNF26Q9BY78 433 aaPredicted RBP13.47□□□□□ -0.25
SYNE4-203ENST00000397428 ADAM7Q9H2U9 754 aa13.47□□□□□ -0.25
SYNE4-203ENST00000397428 ENTPD7Q9NQZ7 604 aa13.47□□□□□ -0.25
SYNE4-203ENST00000397428 SH3GLB2Q9NR46 395 aa13.47□□□□□ -0.25
SYNE4-203ENST00000397428 CHST12Q9NRB3 414 aa13.47□□□□□ -0.25
SYNE4-203ENST00000397428 TCEAL9Q9UHQ7 104 aa13.47□□□□□ -0.25
SYNE4-203ENST00000397428 NAP1L2Q9ULW6 460 aaPredicted RBP13.47□□□□□ -0.25
SYNE4-203ENST00000397428 SNX14Q9Y5W7 946 aa13.47□□□□□ -0.25
SYNE4-203ENST00000397428 CYP3A7-CYP3A51PA0A087WV96 503 aa13.46□□□□□ -0.25
SYNE4-203ENST00000397428 CLASP2O75122 1294 aaKnown RBP13.46□□□□□ -0.25
SYNE4-203ENST00000397428 CDC45O75419 566 aa13.46□□□□□ -0.25
SYNE4-203ENST00000397428 PSMD10O75832 226 aa13.46□□□□□ -0.25
SYNE4-203ENST00000397428 CXCL14O95715 111 aa13.46□□□□□ -0.25
SYNE4-203ENST00000397428 IFNAR1P17181 557 aa13.46□□□□□ -0.25
SYNE4-203ENST00000397428 CYP3A7P24462 503 aa13.46□□□□□ -0.25
SYNE4-203ENST00000397428 PRKCEQ02156 737 aa13.46□□□□□ -0.25
SYNE4-203ENST00000397428 ITIH3Q06033 890 aa13.46□□□□□ -0.25
SYNE4-203ENST00000397428 SMC1AQ14683 1233 aaKnown RBP13.46□□□□□ -0.25
SYNE4-203ENST00000397428 LLGL2Q6P1M3 1020 aa13.46□□□□□ -0.25
SYNE4-203ENST00000397428 RDM1Q8NG50 284 aa13.46□□□□□ -0.25
SYNE4-203ENST00000397428 CASP10Q92851 521 aa13.46□□□□□ -0.25
SYNE4-203ENST00000397428 ZNF668Q96K58 619 aaPredicted RBP13.46□□□□□ -0.25
SYNE4-203ENST00000397428 APOL5Q9BWW9 433 aa13.46□□□□□ -0.25
SYNE4-203ENST00000397428 UNC45AQ9H3U1 944 aa13.46□□□□□ -0.25
SYNE4-203ENST00000397428 DACT1Q9NYF0 836 aa13.46□□□□□ -0.25
SYNE4-203ENST00000397428 HCFC2Q9Y5Z7 792 aa13.46□□□□□ -0.25
SYNE4-203ENST00000397428 GAS7O60861 476 aa13.45□□□□□ -0.26
SYNE4-203ENST00000397428 ZNF623O75123 536 aa13.45□□□□□ -0.26
SYNE4-203ENST00000397428 FGFR4P22455 802 aa13.45□□□□□ -0.26
SYNE4-203ENST00000397428 PDIA3P30101 505 aaKnown RBP13.45□□□□□ -0.26
SYNE4-203ENST00000397428 ALDH7A1P49419 539 aaKnown RBP13.45□□□□□ -0.26
SYNE4-203ENST00000397428 JAK3P52333 1124 aa13.45□□□□□ -0.26
SYNE4-203ENST00000397428 NUBP1P53384 320 aa13.45□□□□□ -0.26
SYNE4-203ENST00000397428 VCPP55072 806 aaKnown RBP13.45□□□□□ -0.26
SYNE4-203ENST00000397428 BCAR1P56945 870 aa13.45□□□□□ -0.26
SYNE4-203ENST00000397428 AKAP17AQ02040 695 aaKnown RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms